Standard name
Human Ortholog
Description Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0.06 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.99 1.0 0.99 0.99 0.97 0.98 0.9 0.85 0.85 0.82 0.82 0.84 0.98 0.98 0.97 0.92 0.94 0.96 0.92 0.98 0.96 0.93 0.94 0.92
Endoplasmic Reticulum 0 0 0 0 0 0 0.05 0.06 0.05 0.06 0.07 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 0 0.06 0.05 0.11 0.08 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0.06 0 0.05 0 0 0 0 0 0.09 0.07 0.05 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 6 1 2 1 3 0 0 0 0 0 0 0 0 1 0 1 1
Bud 0 0 1 0 0 1 1 2 0 0 0 1 7 4 4 0 0 0 2 1 1 4 2 6
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 – – – – – –
Cell Periphery 10 10 1 4 3 9 9 17 19 12 3 7 12 17 22 1 8 8 0 0 0 0 0 0
Cytoplasm 465 545 412 249 372 376 440 439 255 272 71 109 643 646 750 519 368 338 380 527 393 488 554 571
Endoplasmic Reticulum 0 1 1 0 7 6 25 29 16 20 6 4 8 3 11 12 13 13 12 1 2 3 3 9
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 1 0 0 3
Golgi 0 0 0 0 0 0 0 1 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 1
Mitochondria 0 1 2 1 0 2 5 7 17 17 10 10 0 0 0 3 4 3 0 0 0 1 0 1
Nucleus 2 0 0 0 2 3 6 7 3 5 0 5 4 5 8 10 7 2 2 2 0 6 6 1
Nuclear Periphery 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 0 1 0 1 0
Nucleolus 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 4 0 1 2 1 2 10 33 5 18 1 3 0 2 2 52 26 18 3 0 1 17 12 15
Unique Cell Count 472 546 415 252 383 384 487 519 301 330 87 130 657 658 770 563 391 351 414 538 410 527 589 618
Labelled Cell Count 481 557 418 257 385 400 496 542 316 347 92 143 674 679 798 599 427 383 414 538 410 527 589 618


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 23.6 27.9 18.5 18.2 19.5 18.6 17.9 16.6 17.3 14.9 16.0 15.6 28.5 29.1 28.5 21.8 29.5 25.9 19.5 21.1 21.9
Std Deviation (1e-4) 4.2 3.9 3.4 3.9 3.9 3.5 4.0 4.1 4.2 3.9 4.1 4.3 5.7 6.7 6.3 9.3 10.4 9.6 4.3 4.6 5.0
Intensity Change (Log2) – – – -0.02 0.07 0.0 -0.05 -0.16 -0.1 -0.32 -0.22 -0.25 0.62 0.65 0.62 0.23 0.67 0.48 0.07 0.19 0.24

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP7000102030WT3HU80HU120HU1600102030WT3rpd3Δ_1rpd3Δ_2rpd3Δ_30102030WT1AF100AF140AF1800102030
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 3.4 4.9 3.5 0 0 2.3 2.9 3.1 0 0 0
Cytoplasm -0.6 -2.3 -1.6 -5.8 -7.8 -7.6 -8.3 -7.9 -7.5 -1.8 -1.5 -2.2 -5.1 -4.1 -2.9
Endoplasmic Reticulum 0 0 0 4.4 4.6 4.4 4.8 0 0 0 0 0 2.6 3.3 3.6
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 4.2 4.0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 2.5 5.0 0 4.5 0 0 0 0 0 6.1 5.1 4.3

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 25.6561 27.4194 26.6453 24.8926 24.8142 25.6485 14.8753 21.9155 19.1629 16.3759 16.2896 20.3988 20.4174 25.3229 23.6017 22.0868 19.4941 23.6998
Actin 0.0021 0.0003 0.0002 0.0001 0.0001 0.0003 0.0403 0.0026 0.0194 0.0097 0.062 0.0091 0.0132 0.0008 0.0087 0.0007 0.0375 0.0015
Bud 0.0002 0 0.0001 0.0001 0 0.0001 0.0023 0.0074 0.001 0.0008 0.0003 0.0002 0.0007 0 0.0003 0.0001 0.0004 0
Bud Neck 0.0005 0.0002 0.0003 0.0004 0.0004 0.001 0.0045 0.0002 0.0009 0.0015 0.0015 0.0012 0.0009 0.0002 0.0004 0.0004 0.0013 0.0008
Bud Periphery 0.0002 0 0 0 0 0.0001 0.0027 0.002 0.0006 0.0021 0.0001 0.0001 0.0003 0 0.0002 0 0.0004 0
Bud Site 0.0002 0.0001 0.0001 0 0 0.0001 0.0098 0.003 0.0145 0.003 0.0014 0.0001 0.002 0.0002 0.0017 0.0004 0.0014 0
Cell Periphery 0.0001 0 0 0 0 0 0.0009 0.0003 0.0004 0.0044 0 0 0.0002 0.0001 0.0001 0 0.0001 0
Cytoplasm 0.9531 0.9902 0.9883 0.9769 0.9888 0.969 0.6798 0.9707 0.9066 0.7479 0.6899 0.9669 0.8827 0.9854 0.9559 0.9556 0.8298 0.9716
Cytoplasmic Foci 0.002 0.0003 0.0005 0.0005 0.0003 0.002 0.0415 0.003 0.0157 0.0184 0.058 0.0045 0.014 0.0043 0.014 0.0009 0.0294 0.0014
Eisosomes 0 0 0 0 0 0 0.0004 0 0.0002 0.0001 0.0001 0 0.0002 0 0.0001 0 0.0001 0
Endoplasmic Reticulum 0.0016 0.0007 0.0005 0.0016 0.0004 0.0024 0.0208 0.0004 0.002 0.011 0.0037 0.0023 0.0066 0.0006 0.0003 0.0008 0.0029 0.0019
Endosome 0.002 0.0001 0.0005 0.0006 0.0002 0.0018 0.0659 0.0001 0.0104 0.0854 0.0908 0.003 0.019 0.0002 0.0039 0.0009 0.0217 0.0035
Golgi 0.0003 0 0 0 0 0.0002 0.0123 0.0001 0.0031 0.0323 0.0155 0.0027 0.0041 0.0002 0.0014 0.0001 0.0062 0.0013
Lipid Particles 0.001 0 0 0 0 0 0.0174 0.0001 0.0041 0.0079 0.0223 0.0003 0.0026 0.0012 0.0012 0 0.0139 0.0021
Mitochondria 0.0009 0 0 0.0001 0 0.0005 0.0135 0.0029 0.0032 0.0417 0.0012 0.0003 0.0021 0.0001 0.0016 0.0004 0.0065 0.0009
None 0.0014 0.0002 0.0002 0.0005 0.0002 0.0004 0.0155 0.0025 0.0046 0.0009 0.0014 0.0017 0.0068 0.0004 0.0008 0.004 0.006 0.0004
Nuclear Periphery 0.0039 0.0013 0.0011 0.0038 0.0014 0.0036 0.0241 0.0004 0.0017 0.0051 0.0014 0.0011 0.0105 0.0005 0.0005 0.0038 0.0124 0.0035
Nucleolus 0.0008 0 0 0 0 0 0.0024 0.0002 0.0001 0.0001 0.0001 0 0.0007 0 0.0003 0.0005 0.0007 0
Nucleus 0.02 0.0062 0.0076 0.0141 0.0076 0.0168 0.014 0.0026 0.0042 0.0035 0.0035 0.0044 0.0167 0.0021 0.0042 0.0259 0.0163 0.009
Peroxisomes 0.0018 0 0 0 0 0.0001 0.0045 0.0003 0.0009 0.0029 0.0404 0.0002 0.0034 0.0005 0.0022 0.0001 0.0063 0.0006
Punctate Nuclear 0.001 0.0001 0.0001 0.0002 0.0001 0.0002 0.0143 0.0005 0.0036 0.0011 0.0031 0.0016 0.0052 0.0031 0.0004 0.0048 0.003 0.0007
Vacuole 0.0051 0.0002 0.0004 0.0009 0.0004 0.0011 0.0103 0.0005 0.0024 0.0166 0.0027 0.0003 0.0061 0.0001 0.0016 0.0003 0.0021 0.0003
Vacuole Periphery 0.0019 0 0.0001 0.0001 0.0001 0.0002 0.0029 0.0001 0.0004 0.0035 0.0006 0.0001 0.002 0 0.0004 0.0001 0.0015 0.0003

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 38.979 39.9077 33.5912 47.6799 38.0114 41.9541 41.8563 43.6963 47.3157 48.4249
Translational Efficiency 1.8735 1.9527 2.1358 1.947 1.9497 2.2032 1.9939 2.1289 2.0866 1.7374

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✔

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1352 1654 173 1980 1676 2443 149 2462 3028 4097 322 4442

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 1715.21 1498.30 1989.19 1812.99 1524.08 1701.67 2396.80 2157.79 1609.42 1619.57 2177.80 2004.10
Standard Deviation 267.58 292.85 357.35 316.36 274.73 317.25 472.22 346.97 287.70 323.41 461.62 375.11
Intensity Change Log 2 — -0.195059 0.213796 0.079986 — 0.159013 0.653171 0.501616 — -0.017619 0.437225 0.293745

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000203 0.000067 0.000519 0.000122 0.000095 0.000139 0.000654 0.000020 0.000143 0.000110 0.000582 0.000065
Bud Neck 0.000320 0.000239 0.004537 0.000720 0.000194 0.000494 0.002744 0.000381 0.000250 0.000391 0.003707 0.000532
Bud Site 0.003152 0.001277 0.010272 0.003016 0.001417 0.003264 0.006219 0.000569 0.002191 0.002462 0.008396 0.001660
Cell Periphery 0.000127 0.000049 0.000418 0.000113 0.000054 0.000035 0.000841 0.000035 0.000087 0.000040 0.000614 0.000070
Cytoplasm 0.907781 0.901504 0.569460 0.892398 0.918978 0.889426 0.738858 0.870617 0.913979 0.894302 0.647846 0.880326
Cytoplasmic Foci 0.013442 0.003455 0.033394 0.006157 0.006832 0.006121 0.035415 0.002042 0.009784 0.005044 0.034329 0.003877
Eisosomes 0.000002 0.000001 0.000014 0.000001 0.000001 0.000001 0.000005 0.000001 0.000002 0.000001 0.000010 0.000001
Endoplasmic Reticulum 0.000254 0.000066 0.002395 0.000198 0.000141 0.000141 0.000251 0.000036 0.000191 0.000111 0.001403 0.000108
Endosome 0.000523 0.000414 0.004516 0.000473 0.000241 0.000635 0.000978 0.000091 0.000367 0.000546 0.002879 0.000261
Golgi 0.001860 0.000316 0.000804 0.000767 0.000473 0.000756 0.001635 0.000104 0.001092 0.000578 0.001188 0.000399
Lipid Particles 0.000477 0.000139 0.003716 0.000600 0.000242 0.000188 0.004101 0.000112 0.000347 0.000168 0.003894 0.000330
Mitochondria 0.000358 0.000041 0.000083 0.000113 0.000115 0.000396 0.000070 0.000100 0.000223 0.000253 0.000077 0.000105
Mitotic Spindle 0.001462 0.000306 0.006169 0.004059 0.001024 0.005301 0.004779 0.001319 0.001219 0.003285 0.005526 0.002540
None 0.008991 0.010531 0.003541 0.003667 0.007292 0.010864 0.004009 0.007747 0.008050 0.010729 0.003757 0.005928
Nuclear Periphery 0.000034 0.000030 0.001116 0.000101 0.000032 0.000060 0.000340 0.000077 0.000032 0.000048 0.000757 0.000088
Nuclear Periphery Foci 0.004699 0.001386 0.017478 0.002093 0.001976 0.001093 0.010539 0.000330 0.003192 0.001211 0.014267 0.001116
Nucleolus 0.000061 0.000096 0.000169 0.000145 0.000106 0.000122 0.000089 0.000135 0.000086 0.000111 0.000132 0.000139
Nucleus 0.049898 0.073239 0.123906 0.069133 0.053212 0.072230 0.149458 0.103405 0.051733 0.072637 0.135730 0.088128
Peroxisomes 0.000137 0.000074 0.000232 0.000030 0.000048 0.000164 0.000053 0.000014 0.000088 0.000128 0.000149 0.000021
Vacuole 0.005641 0.006680 0.216896 0.015714 0.007216 0.008204 0.038808 0.012746 0.006513 0.007589 0.134489 0.014069
Vacuole Periphery 0.000578 0.000092 0.000365 0.000380 0.000312 0.000366 0.000155 0.000118 0.000431 0.000255 0.000268 0.000235

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin 4.57 -6.05 1.05 -7.02 6.56 -0.75 -6.11 3.95 2.29 6.61 1.12 -8.66 3.14 0.61 9.37
Bud Neck 1.04 -9.85 -7.03 -7.39 8.29 -3.44 -8.34 -10.49 -1.68 7.59 -2.83 -12.90 -10.46 -6.34 11.34
Bud Site 2.27 -5.08 -0.88 -5.12 4.92 -2.37 -6.40 3.45 3.23 6.85 -0.40 -7.55 -0.01 0.44 7.69
Cell Periphery 7.13 -6.19 -0.60 -8.88 6.11 3.69 -7.59 1.98 -1.35 7.66 8.03 -9.71 0.42 -7.78 9.74
Cytoplasm 2.50 21.99 12.40 10.94 -19.11 11.32 16.10 22.97 11.15 -12.06 10.07 26.42 24.71 15.25 -21.62
Cytoplasmic Foci 8.62 -6.64 4.41 -7.50 7.86 0.41 -8.51 7.91 7.45 9.49 6.83 -10.78 7.77 0.80 12.32
Eisosomes 3.42 -9.76 0.10 -7.45 9.94 -0.06 -7.82 1.61 3.55 8.31 2.26 -12.27 1.14 -2.51 12.69
Endoplasmic Reticulum 4.82 -2.20 1.45 -2.70 2.38 -0.18 -3.10 3.73 2.31 4.73 2.19 -2.64 3.12 0.37 3.01
Endosome 0.49 -6.95 -0.00 -0.49 6.96 -2.17 -4.21 1.39 3.05 4.63 -0.94 -8.08 0.72 1.34 8.35
Golgi 3.02 1.63 2.24 -2.04 1.78 -0.87 -5.86 3.91 2.87 8.33 2.21 -1.01 3.01 1.12 7.57
Lipid Particles 4.90 -4.12 -5.17 -9.51 3.74 1.03 -6.34 0.91 -0.30 6.37 4.35 -7.02 -4.33 -8.77 6.79
Mitochondria 1.29 0.88 0.98 -3.74 0.96 -0.97 0.03 -0.01 0.98 -0.15 0.01 0.84 0.95 0.76 0.86
Mitotic Spindle 1.94 -2.78 -3.89 -5.40 1.39 -3.47 -3.79 -1.15 2.85 3.35 -2.68 -4.05 -3.85 -0.61 2.76
None -0.74 7.56 7.42 8.30 -2.27 -3.91 4.95 0.13 4.92 -5.95 -3.24 8.95 5.20 9.41 -6.41
Nuclear Periphery 0.15 -5.44 -8.12 -7.99 4.67 -4.13 -10.53 -12.96 -6.44 8.67 -3.87 -8.43 -14.08 -9.92 7.14
Nuclear Periphery Foci 7.14 -2.53 4.76 -3.62 3.41 4.01 -6.25 9.04 6.60 7.18 8.19 -5.35 7.89 0.07 6.53
Nucleolus -3.92 -9.66 -2.44 -1.71 0.29 -0.69 -0.68 -1.69 -2.37 -2.92 -1.51 -3.84 -2.95 -2.36 -0.29
Nucleus -8.88 -7.96 -12.80 -3.36 4.75 -10.50 -9.89 -24.67 -16.08 3.82 -13.90 -12.40 -26.96 -14.04 5.66
Peroxisomes 0.64 -1.20 1.05 0.77 5.17 -1.93 -2.47 2.23 2.60 5.59 -0.63 -2.02 1.46 2.63 6.59
Vacuole -4.27 -13.14 -16.29 -13.25 11.71 -5.47 -8.49 -12.83 -8.22 7.19 -7.08 -14.93 -20.55 -14.88 13.19
Vacuole Periphery 1.31 0.72 0.72 -3.18 0.03 -0.09 0.80 1.59 2.08 3.72 1.07 0.91 1.25 0.38 1.70
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress
Localization
Cell Percentages cytoplasm (100%)
Cell Cycle Regulation No
Subcompartmental Group cytoplasm-7

Cub1

Cub1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Cub1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available