Standard name
Description Minor sphingoid long-chain base kinase; possibly involved in synthesis of long-chain base phosphates, which function as signaling molecules; LCB5 has a paralog, LCB4, that arose from the whole genome duplication

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.96 0.96 0.93 0.95 0.95 0.89 0.91 0.78 0.79 0.78 0.7 0.97 0.96 0.97 0.82 0.87 0.92 0.67 0.76 0.49 0.71 0.67 0.71
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.14 0.07 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.11 0.05 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.05 0 0 0.05 0 0.08 0.12 0.27 0.22 0.34 0.39 0 0 0 0.07 0 0.05 0.15 0.07 0.18 0 0 0.05
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0 0 0.06 0.05 0 0.05 0 0.06
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 4 0 3 1
Bud 0 0 0 0 0 1 1 2 0 1 2 0 0 0 0 0 0 0 0 3 0 5 2
Bud Neck 0 0 3 1 3 3 3 2 3 2 2 0 0 0 0 0 0 0 0 1 0 1 1
Bud Site 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0
Cell Periphery 0 1 3 1 0 1 0 1 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0
Cytoplasm 89 88 89 59 123 143 156 83 64 50 47 69 145 189 23 52 76 75 89 55 29 79 101
Endoplasmic Reticulum 0 1 1 1 1 3 1 1 0 0 1 2 0 1 4 4 3 2 0 1 1 4 2
Endosome 0 0 1 0 0 2 3 0 0 0 0 0 2 0 3 3 1 1 3 4 1 3 5
Golgi 0 1 0 1 0 0 0 0 1 0 0 0 2 2 0 2 2 1 3 4 0 3 2
Mitochondria 5 1 0 3 0 13 20 29 18 22 26 0 0 0 2 1 4 17 7 20 1 3 6
Nucleus 0 0 3 0 1 2 2 3 1 0 0 0 3 1 0 1 1 0 0 0 0 1 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 2 0 0 0 0 0 1
Nucleolus 1 0 0 0 0 0 0 0 1 2 0 0 0 0 1 1 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 2 3 5 1 1 0 1 0 0 2 0 1 0 3 1 3 3 1 4
Vac/Vac Membrane 0 1 3 0 4 1 3 3 1 0 0 0 1 0 2 2 1 6 5 4 2 4 8
Unique Cell Count 93 92 96 62 129 160 172 107 81 64 67 71 151 194 28 60 83 114 118 113 41 119 144
Labelled Cell Count 95 93 103 66 134 173 194 125 91 78 79 71 153 195 35 69 91 114 118 113 41 119 144


Ambiguous

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.3 4.2 5.2 5.4 6.3 5.0 5.2 3.6 4.0 3.2 3.7 5.1 5.9 5.2 5.8 7.8 7.1 5.8 5.5
Std Deviation (1e-4) 0.5 1.3 2.2 3.5 3.9 3.7 4.0 1.7 2.0 1.5 2.0 1.7 2.5 2.0 1.9 4.2 3.5 2.4 2.3
Intensity Change (Log2) 0.04 0.26 -0.06 -0.0 -0.53 -0.41 -0.72 -0.51 -0.03 0.18 -0.02 0.15 0.58 0.44 0.15 0.07


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Lcb5-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available