Standard name
Description Protein of unknown function; component of the Swr1p complex that incorporates Htz1p into chromatin
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 – 0 0.05 0.07 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0.11 0.06 0.1 0.08 – 0.07 0.06 0.06 0.08 0.07 0.09 0.14 0.16 0.13 0.24 0.17 0 0 0.05 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0.06 0.06 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0.07 0 0.06 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.3 0.05 0.62 0.64 0.27 0.63 – 0.54 0.72 0.68 0.69 0.81 0.06 0.07 0 0.09 0.06 0.06 0 0 0 0 0 0
Nucleus 0.93 0.91 0.74 0.77 0.79 0.63 – 0.68 0.58 0.61 0.64 0.57 0.86 0.81 0.79 0.45 0.46 0.57 0.84 0.8 0.74 0.65 0.61 0.62
Nuclear Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0.07 0 0.06 0.05 0.07 – 0.05 0.09 0.06 0.07 0.05 0.06 0.05 0.06 0 0 0 0.06 0.09 0.06 0.15 0.15 0.11
Peroxisomes 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.05 0.05
Vac/Vac Membrane 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0.3 0.18 0.26 0 0 0.07 0.06 0.09 0.08
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0
Bud 0 0 0 1 0 0 – 6 2 2 2 3 0 0 1 0 0 0 5 1 0 1 5 10
Bud Neck 0 0 0 0 0 0 – 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 4
Bud Site 2 0 0 1 2 8 – 9 8 20 6 10 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 6 3 9 7 18 16 – 22 11 17 12 17 27 59 73 11 20 18 0 2 3 0 5 11
Endoplasmic Reticulum 1 0 0 0 0 0 – 0 0 0 0 0 3 1 0 3 5 6 0 0 0 0 2 0
Endosome 0 0 0 0 2 0 – 0 0 0 0 1 1 1 8 6 3 6 5 0 1 2 5 7
Golgi 0 0 0 0 0 0 – 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 2 1
Mitochondria 143 6 52 70 49 125 – 170 124 182 106 188 19 29 9 7 5 6 6 2 1 1 5 7
Nucleus 449 106 62 85 145 125 – 215 101 164 99 132 263 341 358 37 38 59 426 100 60 71 212 253
Nuclear Periphery 0 1 0 1 0 1 – 2 1 2 0 0 1 1 3 0 1 0 0 0 0 0 0 1
Nucleolus 12 8 1 7 10 14 – 15 16 15 11 11 18 22 29 3 2 2 30 11 4 15 52 46
Peroxisomes 0 0 0 0 0 0 – 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
SpindlePole 4 1 0 2 3 0 – 2 2 4 1 1 6 3 14 1 1 0 7 0 0 5 16 22
Vac/Vac Membrane 3 0 1 1 0 5 – 4 2 5 1 4 3 3 3 25 15 27 21 4 5 6 32 33
Unique Cell Count 484 116 84 110 184 197 314 173 267 154 233 306 421 454 82 82 104 508 125 81 109 347 409
Labelled Cell Count 620 125 125 175 229 294 446 267 411 238 367 341 462 499 94 91 124 508 125 81 109 347 409


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 4.6 5.5 3.9 4.3 4.7 3.7 – 4.0 3.5 3.6 3.6 3.5 5.5 5.5 5.8 8.0 8.3 8.5 5.0 5.5 5.4
Std Deviation (1e-4) 0.6 0.8 1.9 2.4 1.4 1.3 – 1.6 1.7 1.2 1.7 1.5 1.9 1.5 2.0 1.9 2.3 1.7 1.4 1.6 1.8
Intensity Change (Log2) – – – 0.14 0.26 -0.07 – 0.04 -0.18 -0.1 -0.13 -0.17 0.49 0.5 0.56 1.03 1.09 1.12 0.34 0.48 0.47


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -1.1 -0.2 -0.7 – -1.1 -1.2 -1.3 -0.8 -1.0 -0.5 0.8 1.3 0.5 2.3 1.3
Endoplasmic Reticulum 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 – 0 0 0 0 0 -11.7 -12.5 -15.9 -7.2 -7.6 -8.3
Nucleus 0.6 0.9 -1.7 – -0.9 -2.4 -2.1 -1.5 -2.8 2.6 1.5 1.0 -3.8 -3.6 -2.4
Nuclear Periphery 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 – 0 0 0 0 0 0 0 0 5.2 3.7 4.7