Standard name | |
---|---|
Human Ortholog | |
Description | Mitochondrial intermembrane space protein; required for normal oxygen consumption; contains twin cysteine-x9-cysteine motifs; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | – | 3 | 8 | 4 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 2 | 0 | 0 | 2 | 1 | 0 | 0 | – | 3 | 0 | 1 | 1 | 1 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – | – |
Cell Periphery | 2 | 0 | 0 | 2 | 1 | 4 | – | 5 | 4 | 2 | 5 | 12 | 0 | 1 | 1 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 |
Cytoplasm | 482 | 163 | 71 | 135 | 140 | 216 | – | 198 | 140 | 190 | 139 | 155 | 338 | 354 | 383 | 110 | 113 | – | 455 | 163 | 79 | 172 | 215 | 250 |
Endoplasmic Reticulum | 0 | 0 | 0 | 1 | 1 | 2 | – | 20 | 13 | 8 | 10 | 9 | 1 | 4 | 2 | 5 | 1 | – | 1 | 0 | 0 | 1 | 0 | 3 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 3 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 |
Mitochondria | 0 | 0 | 0 | 1 | 0 | 3 | – | 5 | 5 | 7 | 23 | 27 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 1 | 0 | 0 | 2 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 3 | 7 | 5 | 5 | 2 | 0 | 1 | 1 | 0 | – | 9 | 3 | 1 | 5 | 3 | 2 |
Nuclear Periphery | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 4 | 0 | 1 | 1 | 7 | 2 | – | 19 | 10 | 8 | 5 | 5 | 0 | 1 | 0 | 4 | 2 | – | 5 | 2 | 1 | 2 | 4 | 3 |
Unique Cell Count | 487 | 163 | 73 | 138 | 148 | 224 | 244 | 174 | 221 | 184 | 203 | 341 | 359 | 385 | 114 | 114 | 484 | 172 | 88 | 189 | 229 | 274 | ||
Labelled Cell Count | 489 | 163 | 73 | 140 | 149 | 227 | 254 | 184 | 228 | 194 | 215 | 343 | 362 | 388 | 121 | 117 | 484 | 172 | 88 | 189 | 229 | 274 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 37.7 | 42.5 | 25.1 | 35.2 | 36.5 | 30.0 | – | 24.1 | 21.3 | 20.8 | 18.9 | 19.4 | 42.6 | 43.8 | 41.9 | 64.4 | 64.5 | – | 33.7 | 38.3 | 38.0 |
Std Deviation (1e-4) | 8.4 | 7.8 | 9.0 | 9.8 | 10.4 | 7.4 | – | 5.8 | 5.2 | 5.4 | 4.9 | 5.1 | 9.7 | 10.2 | 9.6 | 26.7 | 24.7 | – | 9.3 | 9.5 | 9.7 |
Intensity Change (Log2) | – | – | – | 0.49 | 0.54 | 0.26 | – | -0.05 | -0.24 | -0.27 | -0.41 | -0.37 | 0.77 | 0.81 | 0.74 | 1.36 | 1.36 | – | 0.43 | 0.61 | 0.6 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud Neck | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Bud Site | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Cell Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Cytoplasm | 0.3 | -0.9 | -0.3 | – | -3.4 | -3.4 | -2.6 | -4.1 | -4.0 | 1.3 | 0.8 | 1.9 | -0.3 | 1.0 | – |
Endoplasmic Reticulum | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Endosome | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Golgi | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Mitochondria | 0 | 0 | 0 | – | 0 | 0 | 0 | 3.2 | 3.3 | 0 | 0 | 0 | 0 | 0 | – |
Nucleus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Nuclear Periphery | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Nucleolus | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Peroxisomes | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
SpindlePole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
Vacuole | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 37.6944 | 49.3251 | 43.2261 | 40.7137 | 37.3802 | 44.9912 | 35.3943 | 45.5439 | 41.6493 | 32.8615 | 28.4811 | 41.5547 | 37.4792 | 51.1918 | 47.5574 | 45.6657 | 48.3209 | 51.418 |
Actin | 0.017 | 0.0005 | 0.0007 | 0.002 | 0.0001 | 0.0026 | 0.0148 | 0.0001 | 0.0106 | 0.0431 | 0.0232 | 0.0002 | 0.0411 | 0.0003 | 0.0002 | 0.0001 | 0.0003 | 0 |
Bud | 0.0008 | 0.0001 | 0.0001 | 0.0013 | 0 | 0.0001 | 0.0006 | 0 | 0.0039 | 0.0029 | 0.0104 | 0.0001 | 0.0009 | 0.0001 | 0.0004 | 0.0001 | 0.0002 | 0 |
Bud Neck | 0.0004 | 0.0001 | 0.0002 | 0.0002 | 0.0002 | 0.0005 | 0.0004 | 0.0001 | 0.0007 | 0.0008 | 0.0014 | 0.0006 | 0.0037 | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0003 |
Bud Periphery | 0.0005 | 0.0001 | 0.0001 | 0.0012 | 0 | 0 | 0.0007 | 0 | 0.0031 | 0.0043 | 0.0244 | 0 | 0.001 | 0 | 0.0002 | 0 | 0.0004 | 0 |
Bud Site | 0.0032 | 0.0002 | 0.0005 | 0.0012 | 0 | 0.0001 | 0.0032 | 0 | 0.0097 | 0.003 | 0.0016 | 0.0001 | 0.0065 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0 |
Cell Periphery | 0.0002 | 0 | 0.0001 | 0.001 | 0 | 0 | 0.0003 | 0 | 0.0008 | 0.0004 | 0.0006 | 0 | 0.0004 | 0 | 0 | 0.0001 | 0.0004 | 0 |
Cytoplasm | 0.8572 | 0.9814 | 0.9367 | 0.9101 | 0.9253 | 0.9447 | 0.7863 | 0.9703 | 0.8981 | 0.8152 | 0.6335 | 0.9638 | 0.7602 | 0.9853 | 0.95 | 0.9195 | 0.9212 | 0.9702 |
Cytoplasmic Foci | 0.0171 | 0.0008 | 0.0148 | 0.0121 | 0.0137 | 0.0079 | 0.0337 | 0.0001 | 0.0107 | 0.0065 | 0.045 | 0.0037 | 0.0345 | 0.0001 | 0.0102 | 0.0201 | 0.002 | 0.0002 |
Eisosomes | 0.0003 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0003 | 0 | 0.0002 | 0.0001 | 0.0003 | 0 | 0.0006 | 0 | 0 | 0 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0039 | 0.0001 | 0.0009 | 0.0023 | 0.0002 | 0.0009 | 0.0046 | 0.0001 | 0.0011 | 0.0089 | 0.0056 | 0.0012 | 0.0047 | 0.0001 | 0.0003 | 0.0001 | 0.0026 | 0.0006 |
Endosome | 0.0132 | 0 | 0.005 | 0.0065 | 0.0258 | 0.0018 | 0.0254 | 0 | 0.007 | 0.05 | 0.0493 | 0.0018 | 0.0274 | 0 | 0.0039 | 0.0007 | 0.008 | 0.0001 |
Golgi | 0.0045 | 0 | 0.0022 | 0.0006 | 0.0029 | 0.0022 | 0.0133 | 0 | 0.0062 | 0.0113 | 0.0248 | 0.0001 | 0.0098 | 0 | 0.0009 | 0.0002 | 0.0006 | 0 |
Lipid Particles | 0.0066 | 0.0001 | 0.0026 | 0.0061 | 0.013 | 0.0022 | 0.0189 | 0 | 0.0011 | 0.0022 | 0.0099 | 0.0002 | 0.0194 | 0 | 0.0063 | 0.0143 | 0.0026 | 0 |
Mitochondria | 0.0074 | 0.0053 | 0.0022 | 0.0082 | 0.0002 | 0.0003 | 0.0382 | 0.0158 | 0.0172 | 0.0073 | 0.0285 | 0.0001 | 0.0186 | 0.0001 | 0.005 | 0.0021 | 0.0129 | 0 |
None | 0.0125 | 0.0009 | 0.004 | 0.0067 | 0.0002 | 0.0011 | 0.0054 | 0.0001 | 0.002 | 0.0011 | 0.0241 | 0.0006 | 0.0108 | 0.0002 | 0.0005 | 0.0005 | 0.0057 | 0.0001 |
Nuclear Periphery | 0.0085 | 0.0008 | 0.0021 | 0.0025 | 0.0019 | 0.0052 | 0.007 | 0.0006 | 0.0046 | 0.0067 | 0.0364 | 0.003 | 0.0094 | 0.0013 | 0.0016 | 0.0027 | 0.0039 | 0.0024 |
Nucleolus | 0.0013 | 0.0001 | 0.0003 | 0.0016 | 0 | 0 | 0.001 | 0 | 0.0017 | 0.0002 | 0.0019 | 0.0001 | 0.0014 | 0 | 0.0007 | 0.0121 | 0.0005 | 0 |
Nucleus | 0.0315 | 0.0082 | 0.0159 | 0.0123 | 0.0128 | 0.023 | 0.0302 | 0.0126 | 0.0141 | 0.0088 | 0.0236 | 0.022 | 0.022 | 0.0119 | 0.0147 | 0.0228 | 0.0192 | 0.0257 |
Peroxisomes | 0.0034 | 0.0009 | 0.0008 | 0.0012 | 0.0029 | 0.0064 | 0.0033 | 0 | 0.0019 | 0.0006 | 0.0043 | 0 | 0.0155 | 0 | 0.0029 | 0.0011 | 0.0002 | 0 |
Punctate Nuclear | 0.0044 | 0.0001 | 0.0012 | 0.0006 | 0.0003 | 0.0006 | 0.0096 | 0.0001 | 0.0019 | 0.0009 | 0.0034 | 0.001 | 0.0074 | 0.0002 | 0.0003 | 0.0014 | 0.0002 | 0.0001 |
Vacuole | 0.0041 | 0.0001 | 0.006 | 0.017 | 0.0004 | 0.0003 | 0.0018 | 0 | 0.002 | 0.0142 | 0.0328 | 0.0011 | 0.003 | 0.0001 | 0.001 | 0.001 | 0.0116 | 0.0001 |
Vacuole Periphery | 0.0023 | 0 | 0.0035 | 0.0052 | 0.0002 | 0.0001 | 0.001 | 0 | 0.0015 | 0.0115 | 0.0147 | 0.0001 | 0.0017 | 0 | 0.0004 | 0.0011 | 0.0067 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 242.4679 | 280.6251 | 212.8979 | 250.4587 | 201.9866 | 259.894 | 388.0247 | 384.4395 | 361.4375 | 265.6626 |
Translational Efficiency | 1.8449 | 2.1368 | 2.3273 | 1.7041 | 2.0794 | 2.5833 | 2.1016 | 2.7298 | 2.3419 | 2.3972 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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