Standard name | |
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Human Ortholog | |
Description | Ribosomal 60S subunit protein L15B; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15B has a paralog, RPL15A, that arose from the whole genome duplication; relocalizes from nucleus to nucleolus upon DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 1 | 0 | 1 | 2 | 5 | 3 | 3 | 3 | 7 | 6 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 5 | 2 | 0 | 1 | 3 | 1 |
Bud Neck | 0 | 0 | 0 | 3 | 2 | 0 | 0 | 2 | 1 | 1 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 |
Bud Site | 0 | 0 | 0 | 1 | 0 | 8 | 3 | 5 | 5 | 3 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 4 | 6 | 8 | 7 | 8 | 17 | 28 | 66 | 36 | 42 | 35 | 46 | 22 | 57 | 102 | 42 | 35 | 19 | 2 | 0 | 0 | 1 | 2 | 3 |
Endoplasmic Reticulum | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 10 | 9 | 3 | 0 | 0 | 0 | 1 | 0 | 0 |
Endosome | 2 | 3 | 8 | 37 | 48 | 7 | 42 | 22 | 11 | 28 | 24 | 35 | 43 | 80 | 109 | 39 | 24 | 16 | 6 | 10 | 8 | 25 | 54 | 62 |
Golgi | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 2 | 0 | 1 | 3 | 0 |
Mitochondria | 9 | 11 | 0 | 16 | 2 | 70 | 21 | 60 | 86 | 72 | 103 | 89 | 5 | 3 | 2 | 18 | 16 | 19 | 0 | 7 | 3 | 5 | 7 | 7 |
Nucleus | 235 | 318 | 111 | 71 | 56 | 30 | 48 | 71 | 27 | 54 | 64 | 47 | 78 | 56 | 58 | 144 | 101 | 96 | 178 | 259 | 68 | 53 | 48 | 51 |
Nuclear Periphery | 8 | 6 | 3 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 3 | 0 | 2 | 2 | 1 | 6 | 2 | 4 | 3 | 5 | 7 |
Nucleolus | 47 | 54 | 42 | 156 | 62 | 32 | 22 | 19 | 16 | 19 | 22 | 16 | 164 | 194 | 89 | 106 | 87 | 116 | 113 | 111 | 82 | 75 | 76 | 73 |
Peroxisomes | 1 | 0 | 0 | 1 | 2 | 0 | 0 | 3 | 1 | 2 | 1 | 2 | 1 | 0 | 4 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 4 | 11 | 100 | 56 | 16 | 32 | 34 | 13 | 32 | 21 | 40 | 51 | 89 | 120 | 37 | 24 | 26 | 4 | 5 | 11 | 26 | 42 | 52 |
Vac/Vac Membrane | 13 | 34 | 4 | 4 | 15 | 7 | 20 | 26 | 26 | 24 | 19 | 36 | 4 | 9 | 14 | 25 | 31 | 20 | 22 | 39 | 8 | 36 | 44 | 43 |
Unique Cell Count | 292 | 399 | 163 | 244 | 175 | 138 | 163 | 248 | 166 | 207 | 224 | 243 | 268 | 338 | 350 | 335 | 260 | 252 | 344 | 446 | 191 | 237 | 298 | 314 |
Labelled Cell Count | 319 | 438 | 187 | 399 | 253 | 193 | 220 | 312 | 226 | 284 | 299 | 317 | 370 | 493 | 498 | 424 | 332 | 318 | 344 | 446 | 191 | 237 | 298 | 314 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.3 | 7.5 | 7.9 | 7.4 | 7.5 | 4.4 | 5.3 | 5.0 | 4.5 | 4.6 | 4.6 | 4.7 | 8.0 | 6.7 | 6.1 | 8.6 | 9.9 | 8.7 | 7.2 | 6.8 | 7.0 |
Std Deviation (1e-4) | 1.4 | 1.4 | 1.4 | 1.4 | 5.1 | 1.7 | 1.7 | 1.5 | 1.4 | 1.3 | 1.0 | 1.2 | 1.9 | 1.5 | 1.7 | 2.0 | 2.0 | 2.2 | 1.4 | 1.5 | 2.1 |
Intensity Change (Log2) | – | – | – | -0.09 | -0.08 | -0.83 | -0.57 | -0.67 | -0.82 | -0.76 | -0.78 | -0.75 | 0.02 | -0.25 | -0.37 | 0.13 | 0.32 | 0.15 | -0.13 | -0.22 | -0.17 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -1.1 | -0.1 | 2.3 | 3.5 | 5.6 | 4.5 | 4.3 | 3.3 | 4.1 | 1.3 | 3.7 | 6.2 | 2.7 | 2.8 | 1.1 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 3.2 | 5.6 | 0 | 5.2 | 1.5 | 0 | 0 | 0 | 0 | 3.5 | 5.2 | 6.6 | 2.4 | 1.6 | 0.6 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 3.3 | 0 | 0 | 4.7 | 6.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.0 | 3.2 | 3.6 |
Nucleus | -7.8 | -6.6 | -8.0 | -7.0 | -7.9 | -9.5 | -8.1 | -7.7 | -9.9 | -7.9 | -11.5 | -11.6 | -5.3 | -5.9 | -6.0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 7.5 | 1.9 | 0 | -2.8 | -5.1 | 0 | 0 | 0 | 0 | 7.1 | 6.6 | -0.1 | 1.3 | 1.7 | 4.2 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 7.6 | 5.8 | 0 | 3.4 | 2.2 | 0 | 0 | 0 | 0 | 3.5 | 5.1 | 6.7 | 1.5 | 0.9 | 1.2 |
Vacuole | 0 | 2.4 | 1.2 | 3.4 | 3.1 | 4.2 | 3.3 | 2.5 | 4.1 | 0 | 0 | 0.9 | 2.2 | 3.4 | 2.3 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 6.7136 | 6.9055 | 6.3589 | 5.7118 | 6.0236 | 6.4152 | 5.3547 | 6.0961 | 5.5454 | 5.07 | 4.3647 | 5.8206 | 7.458 | 7.2939 | 6.6271 | 6.6585 | 6.6818 | 7.0299 |
Actin | 0.0153 | 0 | 0.0268 | 0.0002 | 0.0271 | 0.0069 | 0.0665 | 0.0002 | 0.0048 | 0.0325 | 0.0021 | 0.0045 | 0.0263 | 0 | 0.0001 | 0.0103 | 0.0003 | 0.0131 |
Bud | 0.0002 | 0.0001 | 0.0002 | 0.0005 | 0.0003 | 0.0001 | 0.0008 | 0.0002 | 0.0004 | 0.0004 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0003 | 0.0002 | 0.0001 |
Bud Neck | 0.001 | 0.0014 | 0.0022 | 0.0019 | 0.0018 | 0.0017 | 0.0034 | 0.0017 | 0.0013 | 0.0029 | 0.0011 | 0.0024 | 0.0008 | 0.0015 | 0.0009 | 0.001 | 0.0008 | 0.0017 |
Bud Periphery | 0.0005 | 0.0001 | 0.0004 | 0.0012 | 0.0007 | 0.0003 | 0.0019 | 0.0005 | 0.0014 | 0.001 | 0.0009 | 0.0005 | 0.0006 | 0.0002 | 0.0005 | 0.0005 | 0.0008 | 0.0003 |
Bud Site | 0.0015 | 0.0006 | 0.0026 | 0.0009 | 0.0009 | 0.0003 | 0.0091 | 0.0013 | 0.002 | 0.0023 | 0.0012 | 0.0004 | 0.0009 | 0.001 | 0.001 | 0.0008 | 0.0004 | 0.0004 |
Cell Periphery | 0.0003 | 0.0002 | 0.0003 | 0.0016 | 0.0002 | 0.0002 | 0.001 | 0.0005 | 0.0005 | 0.0007 | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0001 |
Cytoplasm | 0.0056 | 0.0003 | 0.0027 | 0.0243 | 0.0008 | 0.0002 | 0.0091 | 0.0007 | 0.0097 | 0.0007 | 0.0014 | 0.0004 | 0.0011 | 0.0034 | 0.0006 | 0.0009 | 0.0002 | 0.0001 |
Cytoplasmic Foci | 0.0047 | 0.0002 | 0.0044 | 0.0007 | 0.0004 | 0.0004 | 0.0233 | 0.0003 | 0.01 | 0.001 | 0.0069 | 0.0009 | 0.0095 | 0.0004 | 0.0009 | 0.0045 | 0.0001 | 0.002 |
Eisosomes | 0.0003 | 0 | 0.0005 | 0.0007 | 0.0003 | 0 | 0.0006 | 0 | 0.0001 | 0.0003 | 0.0001 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0 |
Endoplasmic Reticulum | 0.0014 | 0 | 0.0005 | 0.0016 | 0.0011 | 0.0001 | 0.005 | 0.0003 | 0.0015 | 0.0023 | 0.0027 | 0.0023 | 0.0013 | 0.0003 | 0.0009 | 0.0013 | 0.0001 | 0.0001 |
Endosome | 0.0079 | 0.0003 | 0.0045 | 0.002 | 0.0037 | 0.001 | 0.0294 | 0.0017 | 0.0109 | 0.0071 | 0.0168 | 0.0046 | 0.0157 | 0.0025 | 0.0086 | 0.0104 | 0.0005 | 0.0016 |
Golgi | 0.0032 | 0 | 0.0028 | 0.0001 | 0.0026 | 0.0026 | 0.0216 | 0.0001 | 0.0091 | 0.005 | 0.0055 | 0.002 | 0.0052 | 0 | 0.0005 | 0.0096 | 0.0001 | 0.0013 |
Lipid Particles | 0.0084 | 0.0004 | 0.0051 | 0.0014 | 0.0014 | 0.0007 | 0.0222 | 0.0008 | 0.0084 | 0.0025 | 0.029 | 0.0098 | 0.0083 | 0.0004 | 0.0034 | 0.0121 | 0.0005 | 0.0046 |
Mitochondria | 0.018 | 0.0001 | 0.0016 | 0.0007 | 0.003 | 0.0055 | 0.0239 | 0.0012 | 0.0101 | 0.0044 | 0.0746 | 0.0009 | 0.0252 | 0.0002 | 0.0019 | 0.0046 | 0.0024 | 0.0008 |
None | 0.001 | 0 | 0.0109 | 0.0407 | 0.0043 | 0.0001 | 0.0143 | 0.0069 | 0.004 | 0.0004 | 0.0011 | 0.0002 | 0.0008 | 0.0019 | 0.0003 | 0.0005 | 0.0006 | 0.0001 |
Nuclear Periphery | 0.0149 | 0.0015 | 0.006 | 0.0055 | 0.0443 | 0.0044 | 0.0067 | 0.0052 | 0.0082 | 0.0039 | 0.0138 | 0.0126 | 0.0213 | 0.0124 | 0.0057 | 0.0112 | 0.0077 | 0.0024 |
Nucleolus | 0.4679 | 0.4168 | 0.528 | 0.3834 | 0.3265 | 0.5396 | 0.413 | 0.5723 | 0.6327 | 0.5406 | 0.333 | 0.608 | 0.4347 | 0.5171 | 0.6332 | 0.5209 | 0.2453 | 0.5205 |
Nucleus | 0.424 | 0.5676 | 0.3666 | 0.5081 | 0.5255 | 0.4116 | 0.2927 | 0.3887 | 0.2253 | 0.3434 | 0.4586 | 0.3291 | 0.394 | 0.4351 | 0.3069 | 0.3539 | 0.6949 | 0.4204 |
Peroxisomes | 0.0028 | 0 | 0.0018 | 0.0001 | 0.0003 | 0.0005 | 0.024 | 0.0001 | 0.0137 | 0.0004 | 0.0016 | 0.0013 | 0.0052 | 0 | 0.0001 | 0.0018 | 0.0002 | 0.0027 |
Punctate Nuclear | 0.0185 | 0.0085 | 0.0262 | 0.0027 | 0.0516 | 0.0223 | 0.0213 | 0.0075 | 0.0351 | 0.034 | 0.0397 | 0.0171 | 0.0453 | 0.014 | 0.0136 | 0.053 | 0.0429 | 0.0267 |
Vacuole | 0.0013 | 0.0016 | 0.0045 | 0.0185 | 0.0014 | 0.001 | 0.0081 | 0.0083 | 0.0072 | 0.0132 | 0.0043 | 0.0014 | 0.0015 | 0.0085 | 0.016 | 0.0012 | 0.0008 | 0.0007 |
Vacuole Periphery | 0.0013 | 0.0002 | 0.0013 | 0.0032 | 0.0018 | 0.0003 | 0.0021 | 0.0014 | 0.0035 | 0.001 | 0.0051 | 0.0012 | 0.0017 | 0.0005 | 0.0045 | 0.0008 | 0.001 | 0.0004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 610.0122 | 705.7 | 884.2711 | 637.1796 | 768.8086 | 749.541 | 597.9889 | 618.948 | 742.4403 | 567.4522 |
Translational Efficiency | 1.5479 | 1.4603 | 1.1759 | 1.7911 | 1.4388 | 1.2602 | 1.4881 | 1.5594 | 1.2303 | 1.5247 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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