Standard name
Description Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0.07 0.07 0.06 0.11 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0.07 0.11 0.08 0.09 0.1 0.12 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.97 0.98 0.99 0.99 0.98 0.97 0.75 0.66 0.71 0.66 0.69 0.65 0.99 0.98 0.96 0.99 0.99 1.0 0.96 0.91 0.96 0.95 0.92 0.92
Endoplasmic Reticulum 0 0 0 0 0 0 0.2 0.2 0.16 0.23 0.17 0.17 0 0 0 0.05 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0.06 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 12 7 21 18 12 28 0 0 0 0 0 0 0 0 0 0 1 1
Bud 0 0 1 0 0 0 1 1 1 5 1 1 0 2 2 0 0 0 0 0 1 1 4 4
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 2 0 4 9 8 8 28 32 24 24 19 33 1 11 16 7 1 4 0 0 0 0 0 0
Cytoplasm 195 95 152 202 280 280 293 192 208 173 131 174 247 322 414 349 136 258 188 101 139 250 314 419
Endoplasmic Reticulum 2 1 0 4 7 5 78 57 48 59 32 46 4 1 9 18 6 7 2 1 1 6 10 13
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 1 4 6 17 15 1 9 0 1 1 0 0 1 0 0 0 0 0 1
Mitochondria 1 1 0 0 0 0 2 1 11 6 14 9 0 0 0 0 1 0 1 0 0 0 1 1
Nucleus 1 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 1 0 0 0 1 15 6 1 0 2 0 1 3 0 0 2 0 2 1 1 1 4
Unique Cell Count 200 97 154 205 287 288 392 290 291 262 190 266 250 327 431 352 137 259 197 112 145 262 341 455
Labelled Cell Count 201 97 158 215 295 294 419 313 336 301 211 302 252 339 445 374 144 272 197 112 145 262 341 455


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 78.8 101.5 92.3 88.5 68.7 68.7 41.8 37.6 32.7 31.3 27.6 28.2 105.9 101.5 92.9 164.2 152.6 164.9 102.3 100.0 104.9
Std Deviation (1e-4) 15.9 24.6 20.0 18.6 14.9 14.9 11.2 9.9 9.8 8.4 8.7 6.5 22.9 23.5 21.5 41.1 52.0 53.2 23.3 26.0 27.5
Intensity Change (Log2) -0.06 -0.43 -0.43 -1.14 -1.3 -1.5 -1.56 -1.74 -1.71 0.2 0.14 0.01 0.83 0.73 0.84 0.15 0.12 0.19


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 3.4 3.3 3.2 4.2 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0.9 0 0 2.0 3.1 2.3 2.6 2.7 3.4 0 0 0.7 0 0 0
Cytoplasm -0.1 -0.8 -1.0 -6.5 -7.8 -6.9 -7.8 -7.2 -7.9 0.1 -0.2 -1.6 0.5 0.5 1.1
Endoplasmic Reticulum 0 0 0 6.0 5.9 5.3 6.4 5.3 5.5 0 0 0 2.9 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 3.1 3.0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 3.4 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 0 2.4 0 0 0 0 0 0 0 0 0 0