Standard name | |
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Human Ortholog | |
Description | Putative zinc finger DNA binding transcription factor; contains two N-terminal C2H2 zinc fingers and C-terminal proline rich domain; overproduction impairs cell growth and induces expression of genes involved in monosaccharide catabolism and aldehyde metabolism; regulates expression of of Y' telomeric elements and subtelomeric COS genes; relocalizes to the cytosol in response to hypoxia; RGM1 has a paralog, USV1, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Bud | 0 | 1 | 0 | 0 | 1 | 2 | 0 | – | 12 | 8 | 11 | 8 | 0 | 1 | 0 | 0 | 0 | 0 | 6 | 3 | 2 | 2 | 10 | 11 |
Bud Neck | 0 | 0 | 2 | 0 | 1 | 2 | 1 | – | 5 | 1 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 6 | 1 | – | 4 | 6 | 5 | 9 | 0 | 1 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 16 | 11 | 30 | 20 | 62 | 73 | 106 | – | 89 | 85 | 71 | 86 | 20 | 52 | 82 | 16 | 7 | 12 | 6 | 2 | 16 | 4 | 11 | 15 |
Endoplasmic Reticulum | 0 | 2 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 8 | 2 | 3 | 0 | 0 | 0 | 0 | 0 | 3 |
Endosome | 0 | 0 | 4 | 8 | 20 | 3 | 36 | – | 14 | 11 | 4 | 3 | 0 | 3 | 5 | 0 | 1 | 2 | 0 | 2 | 0 | 1 | 2 | 14 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 2 | 1 | 1 |
Mitochondria | 7 | 27 | 7 | 32 | 16 | 154 | 82 | – | 187 | 227 | 168 | 277 | 3 | 8 | 1 | 3 | 4 | 7 | 2 | 3 | 1 | 2 | 5 | 7 |
Nucleus | 345 | 101 | 179 | 270 | 241 | 142 | 238 | – | 173 | 207 | 144 | 256 | 171 | 291 | 223 | 105 | 62 | 121 | 345 | 111 | 197 | 139 | 192 | 143 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 2 | 2 | 1 | 3 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 2 |
Nucleolus | 0 | 0 | 0 | 2 | 0 | 0 | 1 | – | 1 | 1 | 4 | 5 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 13 | 12 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 3 | 6 | 6 | 14 | – | 6 | 11 | 4 | 9 | 0 | 2 | 0 | 0 | 0 | 0 | 6 | 3 | 9 | 2 | 12 | 14 |
Vac/Vac Membrane | 24 | 24 | 12 | 13 | 34 | 19 | 55 | – | 24 | 29 | 18 | 31 | 12 | 28 | 58 | 15 | 12 | 30 | 32 | 23 | 41 | 25 | 67 | 86 |
Unique Cell Count | 378 | 136 | 226 | 329 | 355 | 321 | 477 | 419 | 467 | 338 | 552 | 202 | 370 | 353 | 133 | 82 | 160 | 406 | 154 | 275 | 186 | 327 | 323 | |
Labelled Cell Count | 392 | 166 | 235 | 348 | 382 | 407 | 534 | 517 | 588 | 432 | 690 | 207 | 388 | 372 | 147 | 89 | 177 | 406 | 154 | 275 | 186 | 327 | 323 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.0 | 4.5 | 5.6 | 5.5 | 6.0 | 4.3 | 5.5 | – | 4.3 | 4.5 | 4.4 | 4.4 | 6.0 | 5.2 | 6.2 | 6.6 | 7.4 | 7.5 | 5.2 | 5.4 | 5.4 |
Std Deviation (1e-4) | 0.6 | 0.6 | 1.5 | 1.5 | 1.9 | 1.9 | 4.4 | – | 1.5 | 1.6 | 1.5 | 3.3 | 1.3 | 1.2 | 1.7 | 1.2 | 1.8 | 1.5 | 1.6 | 1.5 | 1.2 |
Intensity Change (Log2) | – | – | – | -0.01 | 0.11 | -0.39 | -0.01 | – | -0.39 | -0.31 | -0.34 | -0.33 | 0.12 | -0.09 | 0.14 | 0.24 | 0.42 | 0.42 | -0.1 | -0.05 | -0.06 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | 0 | 0 | 0 |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | 2.1 | 2.7 | 4.2 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.4116 | -0.0841 | -0.462 | -0.4768 | -0.8874 | -0.4613 | 2.0405 | 1.7479 | 1.863 | 1.4239 | 1.2983 | 1.7376 | 3.6535 | 3.8566 | 3.5825 | 3.0327 | 3.1995 | 3.4465 |
Actin | 0.0109 | 0 | 0.0002 | 0.0008 | 0 | 0.0004 | 0.0289 | 0 | 0.0119 | 0.0321 | 0.0045 | 0.0063 | 0.008 | 0.0001 | 0.0134 | 0 | 0.0182 | 0.0037 |
Bud | 0.0006 | 0 | 0.0001 | 0.0001 | 0 | 0 | 0.0006 | 0 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0.0003 | 0 | 0.0002 | 0 | 0.0019 | 0 |
Bud Neck | 0.0042 | 0.0002 | 0.0003 | 0.0002 | 0.0003 | 0.001 | 0.0016 | 0.0001 | 0.0003 | 0.0003 | 0.001 | 0.0012 | 0.0006 | 0.0001 | 0.0005 | 0 | 0.0208 | 0.0015 |
Bud Periphery | 0.001 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0013 | 0 | 0.0002 | 0.0002 | 0.0003 | 0.0006 | 0.0006 | 0 | 0.0004 | 0 | 0.0029 | 0.0001 |
Bud Site | 0.0082 | 0.0001 | 0.0001 | 0.0002 | 0 | 0 | 0.0019 | 0.0001 | 0.0004 | 0.0007 | 0.0039 | 0.0009 | 0.0013 | 0.0002 | 0.0007 | 0 | 0.0341 | 0.0001 |
Cell Periphery | 0.0004 | 0 | 0 | 0.0001 | 0 | 0 | 0.0002 | 0 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0.0007 | 0 |
Cytoplasm | 0.0033 | 0.0011 | 0.0023 | 0.0046 | 0.0005 | 0.0012 | 0.0112 | 0.0075 | 0.0011 | 0.0048 | 0.0016 | 0.0009 | 0.0202 | 0.021 | 0.0034 | 0.0002 | 0.0011 | 0.005 |
Cytoplasmic Foci | 0.0075 | 0.0002 | 0.0004 | 0.0034 | 0 | 0.0003 | 0.0274 | 0.0001 | 0.0009 | 0.0046 | 0.0082 | 0.0018 | 0.0077 | 0.0005 | 0.0034 | 0 | 0.0013 | 0.0006 |
Eisosomes | 0.0001 | 0 | 0 | 0 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0003 | 0 |
Endoplasmic Reticulum | 0.001 | 0.0003 | 0.0004 | 0.0033 | 0 | 0.0002 | 0.0048 | 0.0002 | 0.0006 | 0.0028 | 0.0017 | 0.0006 | 0.0069 | 0.001 | 0.0012 | 0 | 0.0005 | 0.0001 |
Endosome | 0.0143 | 0.0142 | 0.0004 | 0.0096 | 0.0001 | 0.0007 | 0.0276 | 0.0001 | 0.0083 | 0.0062 | 0.0244 | 0.0061 | 0.0119 | 0.0004 | 0.0041 | 0 | 0.0026 | 0.0008 |
Golgi | 0.0068 | 0.0017 | 0 | 0.0007 | 0 | 0.0004 | 0.0059 | 0 | 0.0021 | 0.0021 | 0.0067 | 0.0033 | 0.0022 | 0 | 0.0007 | 0 | 0.0018 | 0.0006 |
Lipid Particles | 0.0103 | 0 | 0 | 0.0031 | 0 | 0.0035 | 0.0166 | 0 | 0.0015 | 0.0029 | 0.0112 | 0.0095 | 0.0034 | 0.0001 | 0.0009 | 0 | 0.0016 | 0.0015 |
Mitochondria | 0.0105 | 0.001 | 0.0007 | 0.0019 | 0.0002 | 0.0002 | 0.0164 | 0.0003 | 0.0026 | 0.001 | 0.0017 | 0.0067 | 0.0015 | 0.0002 | 0.0008 | 0.0001 | 0.0013 | 0.0008 |
None | 0.0036 | 0.0009 | 0.0062 | 0.0043 | 0.0002 | 0.0004 | 0.0102 | 0.0065 | 0.0014 | 0.0024 | 0.0009 | 0.0004 | 0.0114 | 0.0326 | 0.0054 | 0 | 0.0006 | 0.0092 |
Nuclear Periphery | 0.0091 | 0.0138 | 0.0089 | 0.0066 | 0.0083 | 0.0093 | 0.0331 | 0.0044 | 0.0066 | 0.0151 | 0.0055 | 0.0088 | 0.0207 | 0.0042 | 0.0071 | 0.0006 | 0.0028 | 0.0021 |
Nucleolus | 0.0111 | 0.0077 | 0.0073 | 0.0041 | 0.0234 | 0.0138 | 0.0058 | 0.0051 | 0.0041 | 0.0025 | 0.0183 | 0.0135 | 0.004 | 0.004 | 0.0052 | 0.0022 | 0.015 | 0.0095 |
Nucleus | 0.8668 | 0.9509 | 0.951 | 0.8778 | 0.9595 | 0.9567 | 0.7587 | 0.971 | 0.9541 | 0.9177 | 0.8912 | 0.9311 | 0.8776 | 0.9217 | 0.9429 | 0.9961 | 0.8789 | 0.9553 |
Peroxisomes | 0.0062 | 0 | 0 | 0.033 | 0 | 0.0006 | 0.0209 | 0 | 0.0006 | 0.0013 | 0.0025 | 0.0015 | 0.006 | 0 | 0.0035 | 0 | 0.0011 | 0.0033 |
Punctate Nuclear | 0.0165 | 0.0042 | 0.0206 | 0.0421 | 0.0073 | 0.0108 | 0.0176 | 0.0042 | 0.0015 | 0.0025 | 0.0142 | 0.0047 | 0.0103 | 0.0134 | 0.0045 | 0.0008 | 0.0109 | 0.0055 |
Vacuole | 0.0057 | 0.0019 | 0.0005 | 0.0034 | 0.0001 | 0.0002 | 0.0054 | 0.0002 | 0.0008 | 0.0004 | 0.0014 | 0.001 | 0.0035 | 0.0004 | 0.0012 | 0 | 0.0011 | 0.0002 |
Vacuole Periphery | 0.0018 | 0.002 | 0.0002 | 0.0006 | 0.0001 | 0.0001 | 0.0038 | 0.0001 | 0.0007 | 0.0002 | 0.0005 | 0.0008 | 0.0017 | 0.0001 | 0.0004 | 0 | 0.0002 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | – | – | – | – | – | – | – | – | – | – |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | – |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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