Standard name | |
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Human Ortholog | |
Description | Component of the MICOS complex; MICOS (formerly MINOS or MitOS) is a mitochondrial inner membrane complex that extends into the intermembrane space and has a role in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane; forms a subcomplex with Mic10p and Mic12p whose assembly and stability requires cardiolipin |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 6 | 4 | 6 | 0 | 1 | 2 | – | 1 | 0 | 0 | 1 | 4 | 5 | 2 | 2 | 2 | 0 | 3 | 30 | 7 | 18 | 26 | 42 |
Bud | 2 | 3 | 4 | 2 | 5 | 11 | 5 | – | 11 | 8 | 11 | 8 | 3 | 4 | 8 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 |
Bud Site | 0 | 2 | 0 | 1 | 0 | 1 | 1 | – | 4 | 3 | 3 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 16 | 8 | 3 | 6 | 1 | 4 | – | 4 | 1 | 5 | 4 | 5 | 3 | 0 | 3 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 |
Cytoplasm | 1 | 3 | 1 | 7 | 8 | 9 | 20 | – | 8 | 11 | 9 | 11 | 6 | 9 | 8 | 18 | 13 | 14 | 0 | 0 | 0 | 0 | 1 | 1 |
Endoplasmic Reticulum | 1 | 8 | 4 | 2 | 1 | 2 | 2 | – | 2 | 1 | 1 | 4 | 0 | 8 | 1 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 1 |
Endosome | 8 | 2 | 11 | 4 | 21 | 3 | 43 | – | 5 | 5 | 13 | 2 | 16 | 19 | 40 | 1 | 1 | 1 | 8 | 17 | 8 | 9 | 15 | 9 |
Golgi | 7 | 9 | 35 | 24 | 31 | 1 | 16 | – | 1 | 4 | 6 | 4 | 17 | 35 | 71 | 10 | 12 | 2 | 22 | 52 | 17 | 27 | 34 | 39 |
Mitochondria | 187 | 328 | 141 | 162 | 155 | 287 | 263 | – | 272 | 254 | 419 | 355 | 259 | 309 | 376 | 4 | 7 | 2 | 157 | 223 | 112 | 79 | 109 | 113 |
Nucleus | 0 | 1 | 0 | 0 | 2 | 5 | 3 | – | 2 | 3 | 8 | 4 | 0 | 0 | 2 | 5 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 21 | 16 | 6 | 5 | 8 | 18 | 38 | – | 19 | 17 | 29 | 34 | 11 | 15 | 12 | 0 | 0 | 1 | 0 | 1 | 0 | 4 | 2 | 2 |
Nucleolus | 18 | 8 | 4 | 1 | 3 | 27 | 22 | – | 16 | 20 | 30 | 15 | 10 | 6 | 8 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 2 | 1 |
Peroxisomes | 9 | 15 | 12 | 8 | 15 | 3 | 6 | – | 8 | 5 | 4 | 2 | 59 | 54 | 85 | 2 | 3 | 1 | 22 | 35 | 37 | 73 | 81 | 86 |
SpindlePole | 1 | 0 | 4 | 3 | 6 | 7 | 16 | – | 9 | 5 | 8 | 7 | 6 | 2 | 4 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 2 |
Vac/Vac Membrane | 22 | 19 | 4 | 8 | 18 | 18 | 61 | – | 13 | 20 | 17 | 21 | 13 | 14 | 23 | 2 | 3 | 0 | 3 | 3 | 1 | 1 | 2 | 1 |
Unique Cell Count | 206 | 348 | 171 | 183 | 212 | 325 | 401 | 302 | 297 | 474 | 406 | 305 | 369 | 486 | 39 | 38 | 20 | 224 | 377 | 186 | 223 | 282 | 307 | |
Labelled Cell Count | 278 | 436 | 238 | 236 | 279 | 394 | 503 | 375 | 357 | 563 | 472 | 410 | 484 | 640 | 48 | 44 | 22 | 224 | 377 | 186 | 223 | 282 | 307 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.1 | 9.2 | 8.7 | 8.5 | 9.1 | 5.9 | 7.6 | – | 6.8 | 7.2 | 7.3 | 7.1 | 8.8 | 9.7 | 9.8 | 10.2 | 11.7 | 9.8 | 8.5 | 9.1 | 9.2 |
Std Deviation (1e-4) | 1.6 | 1.7 | 1.6 | 1.8 | 2.1 | 1.5 | 1.7 | – | 1.8 | 1.7 | 1.9 | 1.7 | 1.6 | 1.8 | 1.9 | 2.9 | 3.1 | 3.3 | 2.4 | 2.3 | 2.5 |
Intensity Change (Log2) | – | – | – | -0.02 | 0.06 | -0.56 | -0.2 | – | -0.35 | -0.28 | -0.26 | -0.29 | 0.02 | 0.16 | 0.17 | 0.23 | 0.42 | 0.17 | -0.04 | 0.06 | 0.08 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0.6 | 0 | – | 0.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -1.6 | -1.0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 2.6 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | -2.0 | 1.2 | 0 | 1.6 | – | -2.8 | -2.7 | -2.2 | 0 | -0.5 | -0.6 | 0.8 | 0 | 0 | 0 |
Golgi | -1.9 | -1.5 | -8.2 | -6.3 | – | -7.9 | -7.2 | -8.8 | -8.5 | -5.0 | -3.5 | -1.8 | 0.7 | 1.5 | 0 |
Mitochondria | 1.6 | -2.2 | 1.8 | -4.1 | – | 2.4 | 0.9 | 2.0 | 1.6 | 0.7 | 0.4 | -1.4 | -8.8 | -7.9 | -7.1 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | -0.4 | 0.1 | 1.0 | 2.5 | – | 1.3 | 1.1 | 1.3 | 2.1 | 0.1 | 0.3 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 2.6 | 1.7 | – | 1.5 | 2.1 | 2.0 | 0.8 | 0.6 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | -1.1 | 0 | -3.8 | -3.5 | – | -2.3 | -3.0 | 0 | 0 | 3.6 | 2.5 | 3.3 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 1.0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 1.1 | 2.6 | 1.6 | 4.4 | – | 1.1 | 2.1 | 0.8 | 1.5 | 1.1 | 0.9 | 1.4 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.0019 | 6.2464 | 5.1814 | 5.1368 | 4.8094 | 5.336 | 7.2533 | 8.6723 | 7.832 | 7.4543 | 7.3933 | 7.904 | 10.8011 | 11.1997 | 10.3815 | 10.4444 | 9.6752 | 9.9992 |
Actin | 0.0451 | 0.019 | 0.0173 | 0.0073 | 0.0081 | 0.0156 | 0.0534 | 0.029 | 0.0142 | 0.0032 | 0.0049 | 0.0118 | 0.0196 | 0.0061 | 0.0183 | 0.0174 | 0.0031 | 0.008 |
Bud | 0.0004 | 0.0006 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0.0008 | 0.0013 | 0.0003 | 0.0001 | 0.0012 | 0.0001 | 0.0003 | 0.0005 | 0.0001 | 0.0001 | 0 | 0.0001 |
Bud Neck | 0.001 | 0.0003 | 0.001 | 0.0001 | 0.0003 | 0.0015 | 0.001 | 0.0004 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0002 | 0.0002 | 0.0003 | 0.0001 | 0 | 0.0001 |
Bud Periphery | 0.0007 | 0.0009 | 0.0003 | 0.0001 | 0.0006 | 0.0003 | 0.0014 | 0.002 | 0.0005 | 0.0002 | 0.002 | 0.0002 | 0.0005 | 0.0005 | 0.0002 | 0.0001 | 0.0001 | 0.0004 |
Bud Site | 0.0026 | 0.0013 | 0.0011 | 0.0002 | 0.0007 | 0.0002 | 0.0023 | 0.0086 | 0.0005 | 0.0001 | 0.0009 | 0.0001 | 0.0008 | 0.0029 | 0.0009 | 0.0001 | 0.0001 | 0.0001 |
Cell Periphery | 0.0003 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0006 | 0.0004 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 |
Cytoplasm | 0.0014 | 0.0001 | 0.0004 | 0.0003 | 0.0007 | 0.0016 | 0.0006 | 0.0002 | 0.0002 | 0 | 0.0004 | 0 | 0.0019 | 0.0004 | 0.0006 | 0 | 0 | 0.0001 |
Cytoplasmic Foci | 0.0092 | 0.0041 | 0.0077 | 0.0095 | 0.0133 | 0.0042 | 0.0074 | 0.0062 | 0.0044 | 0.0036 | 0.0059 | 0.0019 | 0.0053 | 0.0046 | 0.0043 | 0.0019 | 0.0013 | 0.0022 |
Eisosomes | 0.0009 | 0.0003 | 0.0004 | 0.0003 | 0.0003 | 0.0003 | 0.001 | 0.0006 | 0.001 | 0.0002 | 0.0014 | 0.0004 | 0.0007 | 0.0002 | 0.0008 | 0.0003 | 0.0002 | 0.0002 |
Endoplasmic Reticulum | 0.002 | 0.0001 | 0.0005 | 0.0004 | 0.0048 | 0.0004 | 0.0011 | 0.0003 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0.001 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0001 |
Endosome | 0.0215 | 0.0133 | 0.0181 | 0.0118 | 0.0324 | 0.0088 | 0.0332 | 0.0183 | 0.0127 | 0.0065 | 0.0426 | 0.0129 | 0.0153 | 0.0215 | 0.0084 | 0.0026 | 0.0044 | 0.007 |
Golgi | 0.0343 | 0.0868 | 0.0288 | 0.0109 | 0.0268 | 0.0391 | 0.0941 | 0.0817 | 0.0469 | 0.0202 | 0.0768 | 0.0626 | 0.0567 | 0.0551 | 0.0452 | 0.0117 | 0.0486 | 0.0555 |
Lipid Particles | 0.0274 | 0.0096 | 0.0313 | 0.0113 | 0.0066 | 0.0107 | 0.0291 | 0.0149 | 0.0078 | 0.016 | 0.0028 | 0.0124 | 0.0398 | 0.0044 | 0.005 | 0.0016 | 0.0061 | 0.006 |
Mitochondria | 0.7722 | 0.842 | 0.8712 | 0.9334 | 0.877 | 0.8943 | 0.713 | 0.803 | 0.8892 | 0.9387 | 0.8446 | 0.8888 | 0.8149 | 0.8797 | 0.8848 | 0.9412 | 0.9132 | 0.8934 |
None | 0.0013 | 0.0001 | 0.0005 | 0.0004 | 0.0004 | 0.0019 | 0.0007 | 0.0001 | 0.0003 | 0 | 0.0001 | 0 | 0.0031 | 0 | 0.0004 | 0 | 0 | 0.0001 |
Nuclear Periphery | 0.0174 | 0.0001 | 0.0012 | 0.0007 | 0.0074 | 0.0018 | 0.0041 | 0.0002 | 0.0017 | 0 | 0.0002 | 0.0001 | 0.0061 | 0.0001 | 0.0009 | 0 | 0.0003 | 0.0004 |
Nucleolus | 0.0019 | 0.0002 | 0.0004 | 0.0001 | 0.0004 | 0.0002 | 0.0017 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0004 | 0.0002 | 0 | 0.0001 | 0.0001 |
Nucleus | 0.0042 | 0.0001 | 0.0003 | 0.0001 | 0.0008 | 0.0015 | 0.0152 | 0.0002 | 0.0004 | 0 | 0.0002 | 0 | 0.0008 | 0.0001 | 0.0004 | 0 | 0.0001 | 0.0002 |
Peroxisomes | 0.0418 | 0.0172 | 0.0128 | 0.0096 | 0.0109 | 0.0086 | 0.0167 | 0.0239 | 0.0159 | 0.0075 | 0.0092 | 0.0052 | 0.0251 | 0.0105 | 0.0234 | 0.0209 | 0.0164 | 0.0166 |
Punctate Nuclear | 0.0034 | 0 | 0.0023 | 0.0013 | 0.0004 | 0.0056 | 0.0011 | 0.0001 | 0.0007 | 0 | 0.0001 | 0 | 0.0021 | 0 | 0.0038 | 0 | 0 | 0.0039 |
Vacuole | 0.0032 | 0.0016 | 0.0013 | 0.0007 | 0.0027 | 0.0008 | 0.0117 | 0.0027 | 0.0007 | 0.0013 | 0.0026 | 0.0007 | 0.001 | 0.0058 | 0.0004 | 0.0004 | 0.0011 | 0.0019 |
Vacuole Periphery | 0.0077 | 0.0022 | 0.0027 | 0.0016 | 0.0049 | 0.0024 | 0.0098 | 0.0053 | 0.0019 | 0.0019 | 0.003 | 0.0025 | 0.0044 | 0.0066 | 0.0012 | 0.0015 | 0.0044 | 0.0035 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 9.3907 | 9.7938 | 9.3438 | 23.693 | 15.2193 | 12.514 | 21.2197 | 26.7341 | 23.6736 | 25.9613 |
Translational Efficiency | 2.9775 | 2.6711 | 3.1724 | 1.3047 | 1.514 | 2.9952 | 1.6682 | 1.5836 | 1.6699 | 1.3525 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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