Standard name | |
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Description | Cyclin-like component of the RNA polymerase II holoenzyme; involved in phosphorylation of the RNA polymerase II C-terminal domain; forms a kinase-cyclin pair in the RNAPII holoenzyme with Ssn3p; required for both entry into and execution of the meiotic program; involved in glucose repression and telomere maintenance; cyclin homolog 35% identical to human cyclin C |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 1 | 1 | 2 | 1 | 3 | 1 | 4 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 1 | 1 | 1 | 5 | 7 |
Bud Neck | 0 | 0 | 3 | 0 | 3 | 2 | 1 | 2 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 2 |
Bud Site | 2 | 0 | 0 | 0 | 1 | 4 | 10 | 7 | 5 | 5 | 9 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 8 | 3 | 19 | 16 | 43 | 18 | 23 | 22 | 22 | 30 | 14 | 19 | 14 | 35 | 34 | 46 | 31 | 42 | 4 | 0 | 4 | 2 | 3 | 4 |
Endoplasmic Reticulum | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 15 | 10 | 15 | 0 | 0 | 0 | 0 | 0 | 1 |
Endosome | 2 | 0 | 0 | 2 | 3 | 4 | 0 | 2 | 0 | 0 | 0 | 7 | 1 | 1 | 2 | 5 | 5 | 6 | 2 | 2 | 1 | 1 | 6 | 6 |
Golgi | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 2 | 2 | 2 | 0 | 0 | 1 | 1 | 4 | 0 |
Mitochondria | 69 | 1 | 3 | 25 | 36 | 78 | 154 | 105 | 220 | 176 | 197 | 129 | 0 | 0 | 0 | 12 | 8 | 23 | 3 | 1 | 3 | 2 | 10 | 7 |
Nucleus | 163 | 81 | 162 | 155 | 211 | 170 | 191 | 187 | 194 | 244 | 184 | 186 | 90 | 170 | 211 | 347 | 247 | 323 | 168 | 80 | 143 | 104 | 123 | 129 |
Nuclear Periphery | 0 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 1 |
Nucleolus | 13 | 0 | 1 | 0 | 0 | 2 | 1 | 0 | 1 | 2 | 2 | 2 | 0 | 0 | 0 | 0 | 2 | 2 | 4 | 5 | 17 | 15 | 18 | 15 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 1 | 13 | 10 | 7 | 2 | 4 | 16 | 2 | 10 | 1 | 5 | 2 | 6 | 5 | 7 | 9 | 3 | 7 | 2 | 6 | 8 | 12 | 11 |
Vac/Vac Membrane | 11 | 6 | 1 | 0 | 7 | 3 | 4 | 1 | 9 | 8 | 8 | 37 | 5 | 8 | 8 | 25 | 20 | 35 | 21 | 14 | 27 | 17 | 33 | 25 |
Unique Cell Count | 200 | 90 | 190 | 189 | 282 | 226 | 276 | 257 | 312 | 347 | 280 | 297 | 109 | 209 | 254 | 421 | 309 | 417 | 219 | 110 | 215 | 161 | 228 | 222 |
Labelled Cell Count | 269 | 92 | 206 | 210 | 314 | 285 | 393 | 343 | 461 | 476 | 417 | 394 | 113 | 220 | 260 | 460 | 334 | 453 | 219 | 110 | 215 | 161 | 228 | 222 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
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Mean Cell GFP Intensity (1e-4) | 4.0 | 5.5 | 4.9 | 5.2 | 5.0 | 4.0 | 3.8 | 4.5 | 3.7 | 4.0 | 3.6 | 4.2 | 5.8 | 6.0 | 5.9 | 6.6 | 6.9 | 6.5 | 5.5 | 6.0 | 6.1 |
Std Deviation (1e-4) | 0.7 | 1.1 | 0.8 | 1.7 | 1.9 | 1.1 | 1.2 | 1.6 | 0.8 | 1.1 | 0.8 | 1.0 | 1.3 | 1.4 | 1.4 | 1.5 | 1.7 | 1.6 | 1.3 | 1.8 | 1.7 |
Intensity Change (Log2) | – | – | – | 0.07 | 0.02 | -0.29 | -0.39 | -0.12 | -0.43 | -0.3 | -0.46 | -0.22 | 0.25 | 0.3 | 0.26 | 0.43 | 0.49 | 0.4 | 0.15 | 0.29 | 0.32 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
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Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -0.5 | 1.7 | -0.7 | -0.6 | -0.5 | -1.2 | -0.5 | -2.1 | -1.4 | 0.8 | 2.0 | 1.1 | 0.3 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.2 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 4.3 | 4.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.2 |
Nucleus | -0.9 | -2.7 | -2.5 | -4.0 | -3.2 | -5.5 | -3.9 | -4.7 | -5.4 | -0.6 | -1.0 | -0.6 | -0.9 | -1.5 | -2.2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | -0.6 | -2.3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | -1.9 | -1.9 | -2.6 | -3.3 | -2.1 | -4.4 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.8 | 0 | 0 | 0 | 3.1 | 3.2 | 3.8 |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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