Standard name | |
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Human Ortholog | |
Description | Iron-sulfer protein required for synthesis of Wybutosine modified tRNA; Wybutosine is a modified guanosine found at the 3'-position adjacent to the anticodon of phenylalanine tRNA which supports reading frame maintenance by stabilizing codon-anticodon interactions; induction by Yap5p in response to iron provides protection from high iron toxicity; overexpression results in increased cellular iron |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 15 | 37 | 47 | 10 | 25 | 18 | 34 | 27 | 14 | – | 10 | 10 | 11 | 17 | 7 | 16 | 14 | 19 | 4 | 8 | 12 | 3 | 14 | 16 |
Bud | 5 | 7 | 9 | 1 | 8 | 7 | 18 | 9 | 15 | – | 17 | 9 | 3 | 5 | 3 | 3 | 6 | 6 | 0 | 1 | 1 | 1 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 8 | 2 | 3 | 8 |
Bud Site | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 9 | 39 | 80 | 13 | 60 | 20 | 46 | 29 | 22 | – | 21 | 12 | 26 | 100 | 64 | 78 | 69 | 67 | 8 | 11 | 43 | 16 | 71 | 77 |
Cytoplasm | 22 | 43 | 54 | 16 | 86 | 95 | 213 | 149 | 158 | – | 121 | 103 | 22 | 103 | 117 | 46 | 34 | 26 | 1 | 11 | 22 | 2 | 3 | 11 |
Endoplasmic Reticulum | 26 | 60 | 45 | 10 | 54 | 34 | 76 | 48 | 26 | – | 13 | 17 | 22 | 66 | 46 | 1 | 1 | 3 | 83 | 116 | 135 | 66 | 121 | 130 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 1 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 0 | 2 | 0 | 0 | 2 | 1 |
Mitochondria | 0 | 1 | 0 | 1 | 0 | 12 | 17 | 10 | 24 | – | 32 | 12 | 1 | 1 | 1 | 2 | 1 | 2 | 0 | 3 | 25 | 1 | 6 | 4 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | – | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 0 | 1 | 5 | 5 | 4 | 2 | – | 3 | 1 | 0 | 3 | 0 | 1 | 1 | 1 | 1 | 4 | 17 | 2 | 4 | 7 |
Unique Cell Count | 68 | 137 | 194 | 41 | 190 | 158 | 342 | 231 | 225 | 185 | 144 | 60 | 218 | 185 | 124 | 111 | 102 | 109 | 168 | 269 | 101 | 231 | 264 | |
Labelled Cell Count | 78 | 187 | 236 | 51 | 235 | 192 | 410 | 281 | 262 | 220 | 166 | 85 | 298 | 240 | 149 | 129 | 128 | 109 | 168 | 269 | 101 | 231 | 264 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.4 | 10.2 | 8.5 | 8.1 | 8.7 | 6.2 | 6.7 | 6.7 | 5.8 | – | 5.3 | 6.0 | 9.0 | 8.6 | 7.9 | 16.7 | 17.0 | 16.5 | 9.4 | 8.8 | 8.6 |
Std Deviation (1e-4) | 1.5 | 1.5 | 0.9 | 0.9 | 1.1 | 0.9 | 1.0 | 1.0 | 0.8 | – | 0.7 | 1.0 | 1.3 | 1.1 | 1.4 | 3.2 | 2.8 | 3.1 | 1.2 | 1.4 | 1.3 |
Intensity Change (Log2) | – | – | – | -0.06 | 0.04 | -0.45 | -0.33 | -0.34 | -0.54 | – | -0.67 | -0.51 | 0.09 | 0.02 | -0.11 | 0.97 | 1.01 | 0.96 | 0.15 | 0.05 | 0.02 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | -2.8 | -3.1 | -4.4 | -3.4 | -5.2 | – | -5.1 | -4.2 | -1.0 | -4.6 | -5.7 | -2.5 | -2.4 | -1.1 |
Bud | 0 | -0.2 | -0.1 | 0.3 | -0.4 | 0.9 | – | 1.8 | 0.7 | 0 | -1.3 | -1.7 | 0 | 0.3 | 0.5 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -1.1 | -2.0 | -5.9 | -7.3 | -6.7 | -7.5 | – | -6.6 | -6.7 | 0.3 | 0.9 | -1.3 | 3.8 | 3.5 | 4.0 |
Cytoplasm | 1.4 | 3.5 | 6.1 | 7.7 | 7.5 | 8.7 | – | 7.3 | 8.0 | 1.3 | 4.0 | 6.9 | 1.7 | 0.5 | -0.4 |
Endoplasmic Reticulum | 0.2 | 1.2 | -0.4 | -0.3 | -0.6 | -3.2 | – | -4.4 | -2.7 | 2.1 | 1.6 | 0.4 | -5.5 | -5.2 | -4.5 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 3.9 | 3.2 | 0 | 4.7 | – | 6.1 | 4.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 8.8583 | 10.6085 | 9.5274 | 8.8093 | 9.0063 | 9.8757 | 8.4472 | 9.1668 | 8.7358 | 7.46 | 8.138 | 8.6846 | 6.9336 | 7.0946 | 6.7123 | 7.0325 | 6.2607 | 7.0412 |
Actin | 0.07 | 0.0051 | 0.0287 | 0.0078 | 0.0202 | 0.019 | 0.012 | 0.0062 | 0.0123 | 0.0391 | 0.0173 | 0.0119 | 0.0187 | 0.0034 | 0.0114 | 0.0025 | 0.0229 | 0.0102 |
Bud | 0.0013 | 0.0004 | 0.0025 | 0.0005 | 0.0004 | 0.0005 | 0.0013 | 0.0005 | 0.0011 | 0.0005 | 0.0008 | 0.0002 | 0.0005 | 0.0002 | 0.0008 | 0.0002 | 0.0003 | 0.0003 |
Bud Neck | 0.0024 | 0.0037 | 0.0073 | 0.0202 | 0.0148 | 0.023 | 0.0016 | 0.0025 | 0.003 | 0.0251 | 0.0102 | 0.0144 | 0.0021 | 0.0042 | 0.0051 | 0.0031 | 0.0111 | 0.0207 |
Bud Periphery | 0.0099 | 0.002 | 0.0186 | 0.0079 | 0.0032 | 0.0047 | 0.0087 | 0.004 | 0.0085 | 0.0033 | 0.006 | 0.002 | 0.0024 | 0.0011 | 0.0066 | 0.004 | 0.0031 | 0.0031 |
Bud Site | 0.0068 | 0.0375 | 0.0128 | 0.0038 | 0.0026 | 0.0017 | 0.0017 | 0.013 | 0.0093 | 0.0009 | 0.0013 | 0.0002 | 0.0026 | 0.0162 | 0.0116 | 0.0003 | 0.0003 | 0.0008 |
Cell Periphery | 0.0913 | 0.1463 | 0.1653 | 0.1195 | 0.1272 | 0.0738 | 0.0775 | 0.162 | 0.0998 | 0.0519 | 0.0992 | 0.059 | 0.0764 | 0.1066 | 0.1068 | 0.0781 | 0.0659 | 0.0809 |
Cytoplasm | 0.1316 | 0.189 | 0.1497 | 0.0649 | 0.1446 | 0.1512 | 0.1661 | 0.2744 | 0.1217 | 0.141 | 0.1523 | 0.0946 | 0.1592 | 0.1819 | 0.1851 | 0.0871 | 0.1373 | 0.1774 |
Cytoplasmic Foci | 0.0157 | 0.0028 | 0.0072 | 0.017 | 0.0166 | 0.0092 | 0.01 | 0.0032 | 0.0058 | 0.0101 | 0.0092 | 0.0035 | 0.0085 | 0.0022 | 0.0057 | 0.0087 | 0.0072 | 0.004 |
Eisosomes | 0.0031 | 0.0012 | 0.0016 | 0.0012 | 0.0017 | 0.0015 | 0.0013 | 0.0015 | 0.0019 | 0.005 | 0.0019 | 0.0009 | 0.002 | 0.0009 | 0.0013 | 0.0004 | 0.008 | 0.0014 |
Endoplasmic Reticulum | 0.5145 | 0.5462 | 0.5164 | 0.6257 | 0.5717 | 0.6478 | 0.6082 | 0.4858 | 0.6613 | 0.6189 | 0.5842 | 0.7653 | 0.6438 | 0.6297 | 0.5976 | 0.7359 | 0.6317 | 0.6555 |
Endosome | 0.0228 | 0.0021 | 0.0109 | 0.0294 | 0.0132 | 0.0086 | 0.0199 | 0.0034 | 0.0078 | 0.0314 | 0.0233 | 0.0061 | 0.0133 | 0.0025 | 0.0108 | 0.0057 | 0.0123 | 0.0086 |
Golgi | 0.0209 | 0.0033 | 0.0122 | 0.0148 | 0.0288 | 0.0142 | 0.021 | 0.0121 | 0.0182 | 0.0176 | 0.0324 | 0.0123 | 0.0086 | 0.0039 | 0.0093 | 0.0067 | 0.0205 | 0.009 |
Lipid Particles | 0.055 | 0.0322 | 0.0309 | 0.0573 | 0.0247 | 0.0185 | 0.0299 | 0.0191 | 0.0151 | 0.0108 | 0.0083 | 0.0162 | 0.0156 | 0.0283 | 0.0149 | 0.0296 | 0.0182 | 0.0137 |
Mitochondria | 0.0153 | 0.0002 | 0.0023 | 0.0011 | 0.0059 | 0.004 | 0.0045 | 0.0004 | 0.0111 | 0.0014 | 0.0402 | 0.0035 | 0.0047 | 0.0002 | 0.0057 | 0.002 | 0.0503 | 0.0028 |
None | 0.018 | 0.002 | 0.0064 | 0.0008 | 0.0014 | 0.0009 | 0.0062 | 0.0006 | 0.0074 | 0.0143 | 0.0007 | 0.0008 | 0.0051 | 0.001 | 0.0041 | 0.0006 | 0.0022 | 0.0012 |
Nuclear Periphery | 0.0057 | 0.0059 | 0.0057 | 0.0074 | 0.004 | 0.0033 | 0.0082 | 0.0032 | 0.0051 | 0.0057 | 0.0031 | 0.0025 | 0.0145 | 0.0068 | 0.009 | 0.0039 | 0.0033 | 0.0034 |
Nucleolus | 0.0002 | 0.0001 | 0.0003 | 0.0004 | 0.0001 | 0.0001 | 0.0007 | 0.0001 | 0.0002 | 0.0007 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 |
Nucleus | 0.0008 | 0.0008 | 0.001 | 0.0008 | 0.0005 | 0.0008 | 0.0016 | 0.0005 | 0.0007 | 0.002 | 0.0007 | 0.0004 | 0.0028 | 0.0022 | 0.0012 | 0.0005 | 0.0005 | 0.0007 |
Peroxisomes | 0.0024 | 0.0001 | 0.0016 | 0.0042 | 0.0065 | 0.0045 | 0.0063 | 0 | 0.0016 | 0.0009 | 0.0002 | 0.0001 | 0.0045 | 0 | 0.002 | 0.0231 | 0.0015 | 0.0001 |
Punctate Nuclear | 0.001 | 0.0003 | 0.0004 | 0.0005 | 0.0003 | 0.0002 | 0.0025 | 0.0001 | 0.0003 | 0.0077 | 0.0002 | 0.0001 | 0.0018 | 0.0003 | 0.0019 | 0.0002 | 0.0003 | 0.0002 |
Vacuole | 0.0104 | 0.0186 | 0.0175 | 0.0138 | 0.011 | 0.0117 | 0.0095 | 0.0071 | 0.007 | 0.0109 | 0.0072 | 0.0054 | 0.0093 | 0.008 | 0.0078 | 0.0071 | 0.0027 | 0.0054 |
Vacuole Periphery | 0.0008 | 0.0002 | 0.0008 | 0.0009 | 0.0006 | 0.0006 | 0.0013 | 0.0002 | 0.0007 | 0.0008 | 0.0011 | 0.0004 | 0.0031 | 0.0002 | 0.001 | 0.0003 | 0.0003 | 0.0005 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 33.1067 | 35.2712 | 38.507 | 34.4494 | 39.6902 | 29.4622 | 32.6907 | 35.2748 | 31.2663 | 37.3964 |
Translational Efficiency | 1.2031 | 0.9919 | 0.7361 | 0.7829 | 0.7184 | 0.8117 | 0.836 | 0.5002 | 0.5254 | 0.5979 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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