Standard name
Description Poly(A)RNA binding protein involved in nuclear mRNA export; component of the nuclear pore; ortholog of human TAP

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.12 0.07
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0.15 0.06 0.07 0.09 0.09 0.09 0 0 0 0 0.11 0.05 0.06 0 0 0 0 0 0.07
Endoplasmic Reticulum 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06
Endosome 0 0 0 0 0 0.09 0.12 0.08 0 0.05 0 0.07 0.05 0 0.06 0 0.05 0.05 0.15 0.12 0.08
Golgi 0 0.05 0 0 0.05 0 0 0 0 0 0 0 0.06 0.1 0.1 0 0 0 0.15 0.12 0
Mitochondria 0 0 0 0 0 0.07 0.07 0 0.24 0.18 0.45 0.29 0.06 0.06 0.06 0 0 0 0 0.09 0
Nucleus 0 0 0.08 0 0 0 0 0.12 0 0.05 0.05 0.08 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0.55 0.22 0.27 0.43 0.47 0.4 0.49 0.32 0.42 0.44 0.43 0.43 0.2 0.28 0.22 0.86 0.74 0.74 0.19 0.38 0.34
Nucleolus 0.08 0 0 0 0 0.1 0.07 0.11 0.25 0.17 0.19 0.17 0.05 0.07 0.05 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0.63 0.87 0.71 0.56 0.51 0.39 0.33 0.37 0.28 0.31 0.23 0.25 0.71 0.76 0.74 0 0.09 0.05 0 0 0.07
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 1 2 0 0 3 0 0 0 0 1 0 0 1 3 0 1 1 0 0 0 0
Bud 1 1 0 0 0 0 0 2 0 1 0 5 0 1 0 2 8 3 0 0 1
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 1 1 1 1 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
Cytoplasm 2 9 10 6 11 14 16 19 4 5 4 8 13 7 7 0 1 1 0 0 1
Endoplasmic Reticulum 5 0 0 4 5 7 8 4 1 2 3 3 5 6 3 2 3 1 0 0 1
Endosome 5 2 2 3 2 14 21 16 3 8 3 17 6 3 6 7 17 5 0 0 1
Golgi 1 16 0 1 7 2 2 2 1 0 0 0 7 14 11 3 2 0 0 0 0
Mitochondria 6 3 0 2 2 11 13 9 27 27 74 69 7 8 6 0 1 0 0 0 1
Nucleus 2 3 5 2 2 5 6 25 5 8 9 20 3 3 1 3 15 4 0 0 0
Nuclear Periphery 108 76 18 43 70 61 87 67 48 66 71 103 24 38 24 194 285 81 0 3 7
Nucleolus 15 5 2 2 5 15 13 22 28 26 31 40 6 9 5 1 7 1 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
SpindlePole 1 0 0 0 0 1 0 2 0 1 0 3 0 0 0 0 2 3 0 0 0
Vac/Vac Membrane 125 299 47 57 77 60 58 77 32 47 38 61 84 103 80 7 36 5 0 0 1
Unique Cell Count 198 343 66 101 150 154 178 208 114 151 164 240 119 135 108 226 386 111 4 8 23
Labelled Cell Count 272 416 84 120 184 190 224 245 150 193 235 330 156 195 144 226 386 111 4 8 23


Nuclear Periphery

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 12.9 16.0 13.0 11.9 12.5 10.3 10.0 9.8 8.1 8.6 8.0 8.0 14.0 14.3 13.3
Std Deviation (1e-4) 2.6 3.1 2.6 2.3 2.2 2.2 2.0 2.0 1.6 1.7 1.6 1.6 3.3 3.1 3.9
Intensity Change (Log2) -0.13 -0.05 -0.34 -0.39 -0.41 -0.69 -0.6 -0.71 -0.7 0.1 0.13 0.03


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -2.0 -1.8 -1.3 -1.4 -1.4 -2.8 0 0 0 -0.8 -2.4 -1.9
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 2.1 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 4.3 3.7 6.6 4.9 0 0 0
Nucleus 0 0 0 0 1.0 0 0 0 0.2 0 0 0
Nuclear Periphery 2.0 2.7 1.7 3.0 0.8 2.0 2.3 2.3 2.3 -1.1 0.1 -0.8
Nucleolus 0 0 1.7 0 1.9 3.7 2.9 3.1 2.9 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole -1.9 -2.7 -4.4 -5.4 -4.9 -5.6 -5.5 -6.8 -6.9 -0.1 0.8 0.4


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Mex67-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available