Standard name | |
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Description | Subunit of inner ring of nuclear pore complex (NPC); contributes to NPC assembly and nucleocytoplasmic transport; interacts with genomic regions that contain ribosomal protein and subtelomeric genes, where it functions in nucleosome positioning and as a repressor of transcription; both Nup170p and NUP157p are similar to human Nup155p; NUP170 has a paralog, NUP157, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 2 | 3 |
Bud | 0 | 1 | 0 | 0 | 0 | 1 | 4 | 5 | 3 | 1 | 2 | 3 | 0 | 0 | 0 | 1 | 2 | 0 | 2 | 3 | 1 | 1 | 4 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 1 | 0 | 1 | 5 | 7 | 5 | 14 | 7 | 10 | 6 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 6 | 6 | 8 | 7 | 10 | 8 | 16 | 10 | 1 | 6 | 5 | 7 | 15 | 15 | 21 | 18 | 30 | 16 | 0 | 0 | 0 | 0 | 1 | 1 |
Endoplasmic Reticulum | 0 | 4 | 0 | 0 | 0 | 3 | 2 | 1 | 2 | 1 | 1 | 0 | 0 | 1 | 1 | 7 | 6 | 1 | 0 | 0 | 2 | 1 | 3 | 3 |
Endosome | 2 | 0 | 15 | 2 | 20 | 6 | 9 | 11 | 5 | 0 | 5 | 6 | 4 | 4 | 2 | 16 | 13 | 2 | 7 | 7 | 11 | 11 | 26 | 41 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 6 | 2 | 1 | 11 | 10 | 10 |
Mitochondria | 17 | 27 | 49 | 40 | 81 | 263 | 373 | 380 | 306 | 355 | 255 | 301 | 1 | 1 | 1 | 21 | 29 | 6 | 12 | 17 | 14 | 39 | 72 | 66 |
Nucleus | 11 | 19 | 7 | 8 | 10 | 14 | 24 | 34 | 20 | 33 | 19 | 14 | 7 | 7 | 3 | 13 | 21 | 4 | 3 | 8 | 1 | 5 | 0 | 5 |
Nuclear Periphery | 296 | 380 | 271 | 188 | 261 | 247 | 341 | 309 | 218 | 245 | 190 | 264 | 107 | 110 | 104 | 154 | 130 | 38 | 368 | 435 | 328 | 248 | 255 | 322 |
Nucleolus | 24 | 31 | 41 | 58 | 68 | 119 | 167 | 178 | 123 | 158 | 121 | 144 | 11 | 11 | 13 | 28 | 35 | 19 | 7 | 8 | 6 | 2 | 4 | 7 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 5 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 3 | 6 | 12 |
SpindlePole | 0 | 0 | 2 | 0 | 3 | 4 | 7 | 6 | 4 | 8 | 5 | 5 | 3 | 3 | 6 | 5 | 2 | 1 | 1 | 1 | 2 | 2 | 1 | 9 |
Vac/Vac Membrane | 162 | 154 | 81 | 32 | 71 | 39 | 48 | 41 | 31 | 23 | 22 | 19 | 30 | 33 | 41 | 79 | 71 | 35 | 17 | 29 | 4 | 8 | 20 | 20 |
Unique Cell Count | 380 | 469 | 338 | 232 | 369 | 455 | 643 | 680 | 449 | 544 | 411 | 484 | 141 | 144 | 150 | 258 | 246 | 92 | 433 | 521 | 382 | 339 | 413 | 516 |
Labelled Cell Count | 518 | 623 | 475 | 335 | 525 | 709 | 999 | 981 | 733 | 840 | 635 | 772 | 178 | 185 | 195 | 344 | 340 | 122 | 433 | 521 | 382 | 339 | 413 | 516 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
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Mean Cell GFP Intensity (1e-4) | 11.7 | 12.2 | 9.1 | 8.8 | 8.1 | 6.7 | 6.3 | 6.4 | 6.3 | 6.1 | 6.7 | 6.3 | 10.0 | 10.0 | 9.9 | 8.4 | 8.8 | 10.8 | 11.0 | 11.4 | 11.7 |
Std Deviation (1e-4) | 2.2 | 3.3 | 2.3 | 2.2 | 2.1 | 2.0 | 1.9 | 1.6 | 1.8 | 1.8 | 2.2 | 1.7 | 2.7 | 2.7 | 2.8 | 1.8 | 2.1 | 2.5 | 2.3 | 2.2 | 2.2 |
Intensity Change (Log2) | – | – | – | -0.05 | -0.17 | -0.45 | -0.54 | -0.51 | -0.54 | -0.58 | -0.45 | -0.53 | 0.13 | 0.13 | 0.11 | -0.11 | -0.05 | 0.24 | 0.27 | 0.32 | 0.35 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 2.9 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0.5 | 0.3 | -0.6 | 0.1 | -1.0 | 0 | -1.5 | -1.2 | -1.0 | 3.9 | 3.8 | 5.0 | 2.7 | 4.8 | 5.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | -2.5 | 0.6 | -2.7 | -2.9 | -2.7 | -2.9 | -5.0 | -2.7 | -2.9 | -0.8 | -0.9 | -1.7 | 1.0 | 0.5 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0.9 | 2.6 | 12.3 | 13.1 | 12.6 | 15.0 | 14.7 | 13.2 | 13.6 | -4.5 | -4.5 | -4.6 | -2.4 | -1.0 | -2.0 |
Nucleus | 1.0 | 0.6 | 0.9 | 1.4 | 2.2 | 1.8 | 2.8 | 1.9 | 0.7 | 0 | 0 | 0 | 2.0 | 3.6 | 0 |
Nuclear Periphery | 0.3 | -2.9 | -7.6 | -8.3 | -10.5 | -9.1 | -10.3 | -9.5 | -7.6 | -1.0 | -0.9 | -2.6 | -5.5 | -7.0 | -7.4 |
Nucleolus | 4.0 | 2.3 | 4.9 | 5.0 | 5.1 | 5.2 | 5.8 | 5.7 | 6.0 | -1.4 | -1.5 | -1.1 | -0.5 | 0.7 | 2.1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | -3.0 | -1.5 | -6.0 | -7.3 | -8.3 | -6.8 | -8.8 | -7.4 | -8.6 | -0.6 | -0.2 | 0.8 | 1.8 | 1.3 | 2.7 |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
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37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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