Standard name | |
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Human Ortholog | |
Description | HDEL receptor; an integral membrane protein that binds to the HDEL motif in proteins destined for retention in the endoplasmic reticulum; has a role in maintenance of normal levels of ER-resident proteins |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | – | 4 | 25 | 18 | 22 | 23 | 42 | 32 | 45 | 62 | 56 | 70 | 106 | 104 | 105 | 30 | 31 | 31 | 1 | 3 | 6 | 21 | 24 | 27 |
Bud | – | 0 | 2 | 1 | 1 | 2 | 8 | 1 | 6 | 6 | 14 | 14 | 12 | 9 | 6 | 10 | 2 | 7 | 0 | 0 | 1 | 0 | 4 | 5 |
Bud Neck | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 1 |
Bud Site | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | – | 2 | 0 | 1 | 10 | 11 | 7 | 15 | 14 | 18 | 10 | 16 | 5 | 17 | 26 | 3 | 9 | 5 | 0 | 0 | 0 | 0 | 0 | 3 |
Cytoplasm | – | 25 | 5 | 23 | 31 | 38 | 36 | 33 | 33 | 37 | 35 | 29 | 42 | 61 | 64 | 35 | 26 | 29 | 1 | 3 | 1 | 5 | 8 | 14 |
Endoplasmic Reticulum | – | 93 | 111 | 143 | 272 | 228 | 274 | 223 | 234 | 285 | 231 | 319 | 451 | 535 | 550 | 2 | 6 | 2 | 13 | 105 | 113 | 311 | 392 | 565 |
Endosome | – | 0 | 2 | 1 | 1 | 0 | 1 | 2 | 3 | 6 | 3 | 5 | 0 | 0 | 1 | 4 | 5 | 2 | 0 | 0 | 1 | 2 | 6 | 4 |
Golgi | – | 5 | 18 | 26 | 14 | 5 | 20 | 21 | 21 | 40 | 32 | 31 | 119 | 166 | 197 | 87 | 86 | 80 | 0 | 2 | 8 | 33 | 21 | 27 |
Mitochondria | – | 0 | 0 | 1 | 4 | 10 | 12 | 25 | 45 | 43 | 78 | 75 | 0 | 0 | 0 | 14 | 9 | 12 | 0 | 0 | 0 | 2 | 8 | 6 |
Nucleus | – | 0 | 0 | 0 | 0 | 0 | 1 | 4 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | – | 0 | 1 | 0 | 0 | 1 | 0 | 4 | 2 | 5 | 6 | 9 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 2 | 1 |
Nucleolus | – | 0 | 0 | 0 | 0 | 0 | 4 | 3 | 0 | 4 | 1 | 2 | 0 | 1 | 0 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | – | 1 | 1 | 2 | 5 | 2 | 22 | 15 | 15 | 53 | 11 | 25 | 13 | 17 | 17 | 16 | 8 | 13 | 0 | 1 | 0 | 4 | 8 | 13 |
Unique Cell Count | 115 | 127 | 176 | 315 | 271 | 351 | 310 | 320 | 419 | 328 | 442 | 553 | 688 | 738 | 168 | 154 | 151 | 18 | 120 | 135 | 388 | 485 | 676 | |
Labelled Cell Count | 130 | 165 | 216 | 360 | 320 | 427 | 378 | 418 | 560 | 477 | 596 | 749 | 914 | 966 | 203 | 186 | 184 | 18 | 120 | 135 | 388 | 485 | 676 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | – | 36.2 | 22.1 | 22.0 | 21.5 | 21.1 | 18.8 | 18.1 | 17.6 | 16.8 | 16.5 | 16.9 | 26.1 | 28.1 | 28.5 | 24.2 | 27.1 | 27.9 | 30.0 | 30.4 | 32.2 |
Std Deviation (1e-4) | – | 6.5 | 4.7 | 4.6 | 4.4 | 3.8 | 3.9 | 4.3 | 4.2 | 3.5 | 3.5 | 4.1 | 5.5 | 6.1 | 6.0 | 8.1 | 8.0 | 9.6 | 5.8 | 7.4 | 7.2 |
Intensity Change (Log2) | – | – | – | -0.01 | -0.04 | -0.07 | -0.23 | -0.29 | -0.33 | -0.39 | -0.42 | -0.39 | 0.24 | 0.35 | 0.37 | 0.13 | 0.29 | 0.34 | 0.44 | 0.46 | 0.54 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | -2.3 | -3.9 | -3.2 | -2.1 | -2.6 | -1.5 | -1.3 | -0.7 | -1.0 | -0.1 | -1.3 | -1.6 | -0.4 | 0.1 | 0.2 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.9 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2.7 | 2.1 | 3.0 | 2.2 | 2.3 | 2.2 | 1.8 | 2.3 | 1.1 | 1.5 | 1.9 | 1.8 | 4.2 | 3.4 | 3.9 |
Endoplasmic Reticulum | -1.4 | -0.3 | -0.9 | -2.3 | -3.5 | -3.2 | -4.3 | -3.8 | -3.5 | -1.6 | -2.5 | -3.2 | -15.1 | -14.1 | -14.6 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0.1 | -3.6 | -4.9 | -3.0 | -2.5 | -2.6 | -1.5 | -1.4 | -2.5 | 1.9 | 2.5 | 3.0 | 6.7 | 7.2 | 6.7 |
Mitochondria | 0 | 0 | 0 | 0 | 3.3 | 4.5 | 3.8 | 6.0 | 5.0 | 0 | 0 | 0 | 3.3 | 0 | 3.2 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 2.5 | 0 | 0 | 3.9 | 0 | 2.3 | 0 | 0 | 0 | 3.2 | 0 | 3.0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 17.8117 | 20.8255 | 17.6644 | 19.2864 | 16.8281 | 18.9095 | 16.6082 | 19.4561 | 19.7597 | 16.7384 | 17.9602 | 20.0909 | 19.1375 | 23.7088 | 21.847 | 21.3437 | 11.3155 | 23.2393 |
Actin | 0.0143 | 0.0255 | 0.0229 | 0.001 | 0.0039 | 0.0084 | 0.0188 | 0.0245 | 0.0337 | 0.011 | 0.003 | 0.012 | 0.0266 | 0.0069 | 0.0151 | 0.0039 | 0.1783 | 0.0103 |
Bud | 0.0001 | 0.0023 | 0.0004 | 0 | 0.0002 | 0.0009 | 0.0004 | 0.0004 | 0.0004 | 0.0001 | 0.0001 | 0.0003 | 0.0006 | 0 | 0.0002 | 0 | 0.0012 | 0.0001 |
Bud Neck | 0.0016 | 0.001 | 0.001 | 0.0001 | 0.0004 | 0.0014 | 0.0005 | 0.0007 | 0.0008 | 0.0004 | 0.0005 | 0.0027 | 0.0011 | 0.0004 | 0.0015 | 0.0009 | 0.0012 | 0.0011 |
Bud Periphery | 0.0002 | 0.0022 | 0.0009 | 0 | 0.0003 | 0.0006 | 0.0004 | 0.0003 | 0.0005 | 0.0001 | 0.0004 | 0.0003 | 0.0014 | 0 | 0.0002 | 0.0001 | 0.0016 | 0.0001 |
Bud Site | 0.0008 | 0.0127 | 0.0011 | 0 | 0.0008 | 0.0002 | 0.0017 | 0.0122 | 0.0006 | 0.0003 | 0 | 0.0009 | 0.0009 | 0.0001 | 0.0037 | 0 | 0.0039 | 0 |
Cell Periphery | 0.0023 | 0.0059 | 0.003 | 0.0008 | 0.0016 | 0.001 | 0.0018 | 0.0022 | 0.0022 | 0.0009 | 0.0008 | 0.0008 | 0.0016 | 0.0031 | 0.0022 | 0.0018 | 0.0017 | 0.0009 |
Cytoplasm | 0.0267 | 0.0773 | 0.0341 | 0.0061 | 0.0068 | 0.0248 | 0.0362 | 0.0395 | 0.0249 | 0.0125 | 0.0131 | 0.0311 | 0.0224 | 0.0356 | 0.0195 | 0.0098 | 0.008 | 0.0148 |
Cytoplasmic Foci | 0.0207 | 0.0182 | 0.0211 | 0.0054 | 0.0228 | 0.015 | 0.0446 | 0.0439 | 0.0129 | 0.0178 | 0.0072 | 0.0135 | 0.0189 | 0.025 | 0.0212 | 0.0106 | 0.0299 | 0.0184 |
Eisosomes | 0.0009 | 0.0008 | 0.0003 | 0 | 0.0002 | 0.0003 | 0.0005 | 0.0004 | 0.0002 | 0.0001 | 0.0002 | 0.0005 | 0.0004 | 0.0022 | 0.0003 | 0.0008 | 0.0024 | 0.0001 |
Endoplasmic Reticulum | 0.66 | 0.6258 | 0.6757 | 0.8637 | 0.7172 | 0.66 | 0.5109 | 0.5754 | 0.7123 | 0.685 | 0.7316 | 0.6484 | 0.4925 | 0.567 | 0.5613 | 0.7172 | 0.3707 | 0.4518 |
Endosome | 0.0626 | 0.0456 | 0.0649 | 0.0276 | 0.0499 | 0.0632 | 0.0789 | 0.0616 | 0.0487 | 0.0616 | 0.0771 | 0.064 | 0.061 | 0.052 | 0.0571 | 0.0607 | 0.08 | 0.0776 |
Golgi | 0.0894 | 0.076 | 0.0978 | 0.0511 | 0.1058 | 0.1678 | 0.1648 | 0.1581 | 0.1065 | 0.1703 | 0.1339 | 0.1787 | 0.2513 | 0.1953 | 0.2383 | 0.1306 | 0.152 | 0.3264 |
Lipid Particles | 0.0517 | 0.0907 | 0.0404 | 0.0366 | 0.0489 | 0.0232 | 0.0792 | 0.0565 | 0.0185 | 0.0247 | 0.009 | 0.0166 | 0.051 | 0.1019 | 0.0582 | 0.0359 | 0.1024 | 0.064 |
Mitochondria | 0.0042 | 0.0019 | 0.0128 | 0.0006 | 0.0155 | 0.0035 | 0.0136 | 0.0017 | 0.0044 | 0.0013 | 0.0038 | 0.0065 | 0.0024 | 0.0005 | 0.0015 | 0.0009 | 0.0268 | 0.0013 |
None | 0.0133 | 0.0004 | 0.0016 | 0.0001 | 0.0005 | 0.0005 | 0.0027 | 0.0076 | 0.0006 | 0.0022 | 0.001 | 0.0058 | 0.011 | 0.0002 | 0.0009 | 0.0005 | 0.0029 | 0.0002 |
Nuclear Periphery | 0.028 | 0.0057 | 0.0082 | 0.0042 | 0.0128 | 0.0164 | 0.0216 | 0.0077 | 0.0216 | 0.0043 | 0.0098 | 0.0113 | 0.034 | 0.0067 | 0.0102 | 0.0203 | 0.015 | 0.0273 |
Nucleolus | 0.0018 | 0.0001 | 0.0002 | 0 | 0.0001 | 0.0003 | 0.001 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0003 | 0.0006 | 0 | 0.0002 | 0 | 0.0003 | 0 |
Nucleus | 0.0028 | 0.0007 | 0.0006 | 0.0001 | 0.0003 | 0.0035 | 0.0037 | 0.0005 | 0.0014 | 0.0002 | 0.0003 | 0.0011 | 0.0033 | 0.0002 | 0.0011 | 0.0004 | 0.0009 | 0.0004 |
Peroxisomes | 0.0031 | 0.0004 | 0.0038 | 0.0001 | 0.006 | 0.0007 | 0.0036 | 0.001 | 0.0005 | 0.0002 | 0.0001 | 0.0004 | 0.0026 | 0.0002 | 0.0014 | 0.0001 | 0.0084 | 0.0002 |
Punctate Nuclear | 0.0065 | 0.0005 | 0.0017 | 0.0001 | 0.0007 | 0.0016 | 0.0083 | 0.001 | 0.0024 | 0.0005 | 0.0002 | 0.0005 | 0.0077 | 0.0002 | 0.0011 | 0.0002 | 0.0015 | 0.0003 |
Vacuole | 0.0054 | 0.0053 | 0.0052 | 0.0013 | 0.0025 | 0.0038 | 0.0036 | 0.0033 | 0.0036 | 0.0047 | 0.0047 | 0.0026 | 0.005 | 0.0015 | 0.003 | 0.0026 | 0.0074 | 0.0017 |
Vacuole Periphery | 0.0035 | 0.0011 | 0.0024 | 0.0009 | 0.0027 | 0.003 | 0.0034 | 0.0013 | 0.0033 | 0.0017 | 0.0033 | 0.0019 | 0.0036 | 0.0009 | 0.0019 | 0.0025 | 0.0034 | 0.0029 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 66.873 | 31.3847 | 45.4686 | 55.6486 | 42.2681 | 43.4434 | 49.8662 | 58.1336 | 46.3165 | 73.2392 |
Translational Efficiency | 1.3839 | 1.9865 | 1.2104 | 1.0812 | 1.743 | 2.1375 | 1.4207 | 1.1178 | 1.4347 | 1.1894 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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