Standard name | |
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Human Ortholog | |
Description | Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 59 | 22 | 11 | 14 | 28 | 40 | 100 | – | 24 | 77 | 113 | 68 | 24 | 46 | 23 | 12 | 9 | 6 | 22 | 11 | 1 | 10 | 16 | 14 |
Bud | 9 | 7 | 2 | 1 | 5 | 10 | 6 | – | 2 | 6 | 15 | 8 | 4 | 8 | 6 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 4 | 2 | 0 | 2 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 187 | 131 | 72 | 118 | 123 | 57 | 208 | – | 39 | 132 | 170 | 120 | 236 | 372 | 411 | 91 | 110 | 118 | 219 | 139 | 99 | 158 | 373 | 340 |
Cytoplasm | 63 | 56 | 13 | 65 | 30 | 31 | 47 | – | 14 | 42 | 52 | 37 | 54 | 61 | 36 | 9 | 18 | 15 | 11 | 18 | 4 | 4 | 10 | 2 |
Endoplasmic Reticulum | 28 | 2 | 3 | 8 | 14 | 4 | 30 | – | 3 | 15 | 18 | 11 | 19 | 20 | 9 | 6 | 1 | 5 | 12 | 2 | 0 | 3 | 10 | 6 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 2 | 2 |
Golgi | 0 | 0 | 0 | 0 | 2 | 1 | 22 | – | 0 | 3 | 4 | 14 | 1 | 1 | 0 | 1 | 6 | 1 | 1 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 1 | 1 | 0 | 0 | 0 | 38 | 11 | – | 25 | 41 | 86 | 52 | 0 | 0 | 1 | 12 | 14 | 22 | 1 | 0 | 0 | 7 | 2 | 1 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 2 | 2 | – | 3 | 1 | 4 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 1 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 2 | 1 | – | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 1 | 2 | 0 | 0 | 2 | 2 | – | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 0 | 1 | 0 | 1 | 7 | – | 0 | 1 | 1 | 7 | 0 | 0 | 0 | 2 | 2 | 0 | 0 | 1 | 0 | 1 | 0 | 0 |
Unique Cell Count | 246 | 160 | 85 | 151 | 163 | 116 | 302 | 76 | 208 | 268 | 196 | 254 | 419 | 441 | 102 | 124 | 135 | 276 | 181 | 109 | 192 | 423 | 376 | |
Labelled Cell Count | 348 | 221 | 103 | 207 | 202 | 188 | 436 | 110 | 318 | 465 | 321 | 338 | 509 | 487 | 136 | 160 | 170 | 276 | 181 | 109 | 192 | 423 | 376 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 14.0 | 13.7 | 14.5 | 13.7 | 16.2 | 10.9 | 15.1 | – | 12.0 | 13.4 | 12.8 | 13.9 | 18.7 | 21.1 | 21.5 | 22.1 | 23.4 | 22.6 | 13.4 | 14.9 | 16.0 |
Std Deviation (1e-4) | 2.2 | 2.2 | 2.0 | 2.2 | 2.8 | 2.6 | 2.4 | – | 2.8 | 3.0 | 2.7 | 4.0 | 2.9 | 3.7 | 4.2 | 4.8 | 9.6 | 4.8 | 3.0 | 2.8 | 3.1 |
Intensity Change (Log2) | – | – | – | -0.08 | 0.16 | -0.41 | 0.06 | – | -0.27 | -0.11 | -0.18 | -0.06 | 0.36 | 0.54 | 0.56 | 0.61 | 0.69 | 0.64 | -0.12 | 0.04 | 0.14 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | -0.9 | 0.9 | 3.5 | 3.6 | – | 2.9 | 4.1 | 4.9 | 3.7 | -0.9 | -0.5 | -2.7 | -0.2 | -1.4 | -2.3 |
Bud | 0 | 0 | 1.9 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -1.2 | -1.7 | -5.2 | -2.9 | – | -4.6 | -3.6 | -3.7 | -3.9 | 2.3 | 1.1 | 2.6 | 0.9 | 0.8 | 0.6 |
Cytoplasm | 4.4 | 0.6 | 1.9 | 0.1 | – | 0.5 | 1.0 | 0.9 | 0.7 | 1.2 | -0.2 | -2.1 | -1.4 | -0.2 | -0.9 |
Endoplasmic Reticulum | 0 | 1.5 | 0 | 1.9 | – | 0 | 1.2 | 1.1 | 0 | 1.3 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 5.9 | 0 | – | 5.8 | 4.4 | 6.0 | 5.3 | 0 | 0 | 0 | 3.3 | 3.2 | 3.9 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 9.5854 | 14.1796 | 11.5235 | 9.8763 | 10.5633 | 11.6054 | 14.4703 | 19.3522 | 16.7638 | 15.3815 | 14.686 | 16.8912 | 18.0905 | 21.6781 | 19.5211 | 17.9984 | 20.2378 | 19.291 |
Actin | 0.0353 | 0.0108 | 0.0122 | 0.0017 | 0.0054 | 0.0036 | 0.0377 | 0.0005 | 0.0061 | 0.0088 | 0.0125 | 0.0131 | 0.0052 | 0.0014 | 0.0075 | 0.0007 | 0.0027 | 0.0021 |
Bud | 0.0014 | 0.0003 | 0.0004 | 0.0001 | 0.0006 | 0.0002 | 0.0007 | 0.0001 | 0.0005 | 0.0004 | 0.0006 | 0.0005 | 0.0006 | 0.0002 | 0.0002 | 0.0003 | 0.0003 | 0.0003 |
Bud Neck | 0.0019 | 0.0007 | 0.0021 | 0.0006 | 0.0036 | 0.0018 | 0.0016 | 0.001 | 0.0023 | 0.0044 | 0.0013 | 0.0023 | 0.0024 | 0.0017 | 0.0039 | 0.0072 | 0.003 | 0.0032 |
Bud Periphery | 0.009 | 0.0012 | 0.0025 | 0.0017 | 0.0041 | 0.0033 | 0.0042 | 0.0007 | 0.0017 | 0.0069 | 0.0059 | 0.005 | 0.0037 | 0.001 | 0.0019 | 0.0049 | 0.0032 | 0.0053 |
Bud Site | 0.0095 | 0.0379 | 0.0089 | 0.0004 | 0.0051 | 0.0004 | 0.0063 | 0.0108 | 0.0138 | 0.0013 | 0.0024 | 0.0011 | 0.0076 | 0.0371 | 0.0076 | 0.001 | 0.0015 | 0.0008 |
Cell Periphery | 0.7132 | 0.8318 | 0.8257 | 0.8328 | 0.7714 | 0.8619 | 0.6997 | 0.779 | 0.7695 | 0.7733 | 0.7822 | 0.8051 | 0.8039 | 0.7744 | 0.8452 | 0.8007 | 0.7483 | 0.8302 |
Cytoplasm | 0.0814 | 0.0513 | 0.0679 | 0.0264 | 0.1116 | 0.0442 | 0.087 | 0.1601 | 0.1231 | 0.0824 | 0.0556 | 0.0911 | 0.0986 | 0.1486 | 0.084 | 0.1176 | 0.1901 | 0.1004 |
Cytoplasmic Foci | 0.0102 | 0.0013 | 0.0047 | 0.0031 | 0.0012 | 0.0006 | 0.0035 | 0.0001 | 0.0022 | 0.0184 | 0.0008 | 0.0004 | 0.0003 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0001 |
Eisosomes | 0.0604 | 0.0322 | 0.0323 | 0.0061 | 0.0439 | 0.04 | 0.0774 | 0.0252 | 0.0232 | 0.0168 | 0.0885 | 0.0252 | 0.0247 | 0.0241 | 0.0216 | 0.0062 | 0.0312 | 0.0253 |
Endoplasmic Reticulum | 0.025 | 0.0235 | 0.0131 | 0.0243 | 0.0187 | 0.0186 | 0.0315 | 0.0187 | 0.0211 | 0.0508 | 0.0315 | 0.0326 | 0.0372 | 0.008 | 0.021 | 0.0532 | 0.0153 | 0.0273 |
Endosome | 0.0064 | 0.0003 | 0.0019 | 0.0059 | 0.0004 | 0.0023 | 0.0045 | 0 | 0.0017 | 0.001 | 0.0008 | 0.0013 | 0.0019 | 0 | 0.0002 | 0 | 0 | 0 |
Golgi | 0.0044 | 0.0015 | 0.0013 | 0.0013 | 0.0006 | 0.0019 | 0.0089 | 0.0002 | 0.0012 | 0.0015 | 0.0015 | 0.0021 | 0.0005 | 0.0003 | 0.0004 | 0.0003 | 0.0003 | 0.0004 |
Lipid Particles | 0.0067 | 0.0026 | 0.004 | 0.0113 | 0.0042 | 0.0014 | 0.0037 | 0.0004 | 0.005 | 0.0026 | 0.0014 | 0.0012 | 0.0012 | 0.0004 | 0.0008 | 0.0009 | 0.0004 | 0.0008 |
Mitochondria | 0.0168 | 0 | 0.0126 | 0.0376 | 0.0175 | 0.0118 | 0.0123 | 0 | 0.017 | 0.0227 | 0.0083 | 0.0149 | 0.002 | 0 | 0.0003 | 0 | 0 | 0 |
None | 0.0025 | 0.0004 | 0.0039 | 0.0016 | 0.0008 | 0.0005 | 0.0013 | 0.0003 | 0.0018 | 0.0007 | 0.0015 | 0.0003 | 0.0008 | 0.0003 | 0.0004 | 0.0002 | 0.0003 | 0.0002 |
Nuclear Periphery | 0.0038 | 0.0017 | 0.0014 | 0.0058 | 0.001 | 0.0046 | 0.0099 | 0.0016 | 0.0015 | 0.0024 | 0.0019 | 0.0015 | 0.0046 | 0.0012 | 0.0023 | 0.0034 | 0.0018 | 0.0014 |
Nucleolus | 0.0013 | 0.0001 | 0.0002 | 0.0265 | 0.0014 | 0.0001 | 0.0003 | 0 | 0.001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0.0013 | 0.0002 | 0.0002 | 0.0017 | 0.0006 | 0.0003 | 0.0028 | 0.0001 | 0.0007 | 0.0002 | 0.0002 | 0.0001 | 0.0005 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0001 |
Peroxisomes | 0.0024 | 0 | 0.0024 | 0.0037 | 0.0055 | 0.0002 | 0.0015 | 0 | 0.0042 | 0.0017 | 0.0005 | 0.0003 | 0 | 0 | 0.0002 | 0 | 0 | 0 |
Punctate Nuclear | 0.0019 | 0.0001 | 0.0004 | 0.0037 | 0.0005 | 0.0003 | 0.0004 | 0 | 0.0004 | 0.0011 | 0 | 0.0001 | 0.0002 | 0 | 0.0001 | 0 | 0 | 0 |
Vacuole | 0.0046 | 0.002 | 0.0019 | 0.0028 | 0.0018 | 0.0016 | 0.004 | 0.0013 | 0.0019 | 0.0023 | 0.0024 | 0.0019 | 0.0036 | 0.0011 | 0.0019 | 0.0029 | 0.0012 | 0.0019 |
Vacuole Periphery | 0.0007 | 0 | 0.0002 | 0.0008 | 0.0002 | 0.0003 | 0.0007 | 0 | 0.0002 | 0.0001 | 0.0003 | 0.0002 | 0.0004 | 0 | 0.0001 | 0 | 0 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 61.8813 | 42.0729 | 75.1591 | 84.5669 | 72.3216 | 97.5615 | 63.8098 | 95.7052 | 125.1709 | 73.1196 |
Translational Efficiency | 1.698 | 1.7757 | 1.4472 | 2.2059 | 1.5431 | 1.287 | 1.6091 | 1.4924 | 1.325 | 1.4639 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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