Standard name | |
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Description | Peptidylprolyl-cis/trans-isomerase (PPIase); specific for phosphorylated S/T residues N-terminal to proline; regulates phosphorylation of RNAPII large subunit (Rpo21p) C-terminal domain (CTD) at Ser7; associates with phospho-Ser5 form of RNAPII in vivo; present along entire coding length of genes; represses initiation of CUTs; required for efficient termination of mRNA transcription, trimethylation of histone H3; human ortholog PIN1 can complement yeast null and ts mutants |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 2 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | – | 0 | 0 | 0 | 2 | 1 | – | 3 | 3 | 3 | 3 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 21 | 46 | 35 |
Bud Neck | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 9 |
Bud Site | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 4 | 4 | 3 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 2 | – | 0 | 11 | 21 | 13 | 33 | – | 13 | 21 | 13 | 17 | 30 | 104 | 175 | 17 | 17 | 27 | 0 | 1 | 0 | 10 | 36 | 43 |
Endoplasmic Reticulum | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 5 | 5 | 8 | 0 | 0 | 0 | 1 | 4 | 5 |
Endosome | 0 | – | 0 | 5 | 1 | 2 | 3 | – | 4 | 6 | 3 | 4 | 7 | 4 | 18 | 3 | 1 | 1 | 1 | 0 | 2 | 11 | 35 | 26 |
Golgi | 0 | – | 0 | 0 | 5 | 0 | 4 | – | 0 | 1 | 0 | 0 | 10 | 18 | 17 | 6 | 10 | 19 | 0 | 0 | 0 | 0 | 1 | 3 |
Mitochondria | 0 | – | 0 | 0 | 2 | 18 | 1 | – | 24 | 13 | 19 | 21 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 0 |
Nucleus | 18 | – | 5 | 156 | 288 | 119 | 273 | – | 183 | 205 | 155 | 244 | 133 | 113 | 97 | 72 | 54 | 44 | 50 | 55 | 30 | 188 | 303 | 244 |
Nuclear Periphery | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 10 | 6 |
Nucleolus | 16 | – | 8 | 0 | 7 | 19 | 9 | – | 24 | 42 | 26 | 37 | 15 | 6 | 4 | 1 | 2 | 6 | 16 | 5 | 10 | 64 | 126 | 70 |
Peroxisomes | 0 | – | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | – | 0 | 0 | 1 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 14 | 59 | 49 |
Vac/Vac Membrane | 6 | – | 5 | 38 | 84 | 66 | 89 | – | 56 | 93 | 36 | 61 | 119 | 214 | 289 | 60 | 63 | 68 | 0 | 2 | 2 | 30 | 78 | 58 |
Unique Cell Count | 36 | 17 | 204 | 389 | 216 | 387 | 282 | 344 | 231 | 359 | 293 | 426 | 552 | 151 | 133 | 149 | 73 | 70 | 49 | 352 | 724 | 568 | ||
Labelled Cell Count | 42 | 18 | 210 | 409 | 239 | 413 | 311 | 389 | 258 | 392 | 315 | 461 | 600 | 167 | 153 | 174 | 73 | 70 | 49 | 352 | 724 | 568 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 10.4 | – | 8.9 | 11.8 | 12.4 | 8.0 | 11.3 | – | 9.5 | 10.2 | 9.5 | 9.9 | 14.8 | 14.7 | 14.8 | 18.2 | 19.8 | 19.5 | 12.2 | 12.4 | 12.8 |
Std Deviation (1e-4) | 2.5 | – | 1.3 | 2.1 | 1.9 | 2.0 | 2.2 | – | 1.9 | 1.9 | 1.8 | 2.0 | 2.3 | 2.2 | 2.2 | 4.4 | 4.7 | 5.7 | 1.7 | 1.9 | 2.0 |
Intensity Change (Log2) | – | – | – | 0.41 | 0.49 | -0.15 | 0.35 | – | 0.1 | 0.2 | 0.11 | 0.16 | 0.74 | 0.73 | 0.74 | 1.04 | 1.16 | 1.14 | 0.46 | 0.48 | 0.53 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 2.8 | 0 | 0 | 0 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 4.2 | 4.0 | 2.0 | 3.6 | – | 2.9 | 2.5 | 3.1 | 3.3 | 1.3 | 0 | 0 | 1.4 | 0.9 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0.1 | 0 | – | 0 | 0 | 0 | 0 | 0.9 | 1.7 | 1.9 | 0.8 | 1.4 | 1.3 |