Standard name
Description Subunit (90 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0.06 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.91 0.93 0.98 0.98 0.99 0.95 0.95 0.95 0.85 0.78 0.8 0.89 0.99 0.99 0.99 0.98 0.98 0.75 0.74 0.7 0.68 0.67 0.71
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0.05 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.14 0.09 0 0 0 0 0.09 0.08 0.26 0.31 0.31 0.14 0.05 0 0 0.05 0 0.11 0.11 0.13 0.11 0.14 0.09
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 1 3 4 2 6 2
Bud 0 2 0 0 0 0 3 4 2 5 9 4 0 1 0 0 0 1 0 1 3 4 5
Bud Neck 0 1 5 2 7 5 14 18 2 9 9 12 0 0 0 3 11 0 1 1 2 2 4
Bud Site 0 0 0 0 0 0 0 0 0 0 3 1 0 0 0 0 0
Cell Periphery 0 0 2 3 3 0 0 1 0 0 0 1 1 1 0 2 4 1 1 3 3 1 2
Cytoplasm 124 199 271 199 340 200 316 290 152 139 199 255 161 269 254 492 518 110 149 164 96 161 182
Endoplasmic Reticulum 1 2 0 0 0 0 0 0 1 0 0 0 0 1 1 49 25 2 0 0 2 1 6
Endosome 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 4 4 4 1 2 1 0
Golgi 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 2 2 0 0 0 1 2 0
Mitochondria 19 19 1 3 2 9 30 25 46 55 77 39 8 1 0 26 9 16 21 30 15 34 23
Nucleus 0 1 1 2 2 0 2 4 3 3 1 1 2 1 0 3 2 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
Peroxisomes 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1
SpindlePole 0 0 2 0 1 3 7 4 3 4 9 10 0 0 0 0 0 0 3 1 1 4 2
Vac/Vac Membrane 0 0 1 0 0 0 0 2 0 0 0 2 0 1 1 3 4 2 7 4 5 8 18
Unique Cell Count 137 213 277 204 345 210 333 306 178 179 250 285 163 271 256 502 530 147 203 234 142 239 257
Labelled Cell Count 144 224 284 210 355 218 372 350 209 215 307 325 172 275 257 581 582 147 203 234 142 239 257


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.3 2.9 4.2 3.9 4.6 3.5 3.4 3.8 3.2 2.9 2.7 3.5 3.6 3.8 4.1 5.1 5.1 4.8 3.5 3.5 4.1
Std Deviation (1e-4) 0.4 0.5 0.9 1.4 1.8 1.2 1.0 1.1 1.4 0.7 0.6 1.6 0.7 1.3 1.7 1.2 1.0 0.8 1.4 1.3 2.0
Intensity Change (Log2) -0.1 0.14 -0.28 -0.31 -0.14 -0.41 -0.54 -0.62 -0.26 -0.21 -0.13 -0.04 0.29 0.27 0.2 -0.25 -0.28 -0.02


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Taf5-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available