Standard name | |
---|---|
Description | Member of the conserved GPN-loop GTPase family; has a role in transport of RNA polymerase II to the nucleus; exhibits GTP-dependent binding to PolII; has ATPase activity; involved in sister chromatid cohesion; phosphorylated by the Pcl1p-Pho85p kinase complex; human homolog XAB1 interacts with human RNA polymerase II; protein abundance increases in response to DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 0 | 2 | 1 | 6 | 14 | 6 | 7 | 5 | 1 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
Bud | 2 | 0 | 0 | 2 | 0 | 3 | 10 | 3 | 6 | 14 | 11 | 17 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 12 | 3 | 18 | 8 | 36 | 36 | 23 | 37 | 27 | 26 | 14 | 21 | 17 | 3 | 10 | 5 | 0 | 0 | 1 | 0 | 0 | 0 |
Cytoplasm | 134 | 177 | 270 | 277 | 406 | 375 | 419 | 360 | 273 | 337 | 233 | 273 | 475 | 612 | 562 | 156 | 244 | 181 | 127 | 170 | 263 | 301 | 300 | 425 |
Endoplasmic Reticulum | 0 | 4 | 19 | 4 | 10 | 13 | 45 | 39 | 22 | 24 | 13 | 11 | 11 | 13 | 8 | 3 | 5 | 3 | 1 | 2 | 13 | 1 | 2 | 10 |
Endosome | 0 | 0 | 0 | 0 | 1 | 2 | 1 | 0 | 0 | 5 | 1 | 2 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 2 |
Golgi | 1 | 0 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 0 | 0 | 0 |
Mitochondria | 2 | 0 | 3 | 14 | 40 | 77 | 219 | 150 | 121 | 238 | 174 | 198 | 0 | 0 | 0 | 0 | 4 | 3 | 0 | 0 | 3 | 0 | 1 | 0 |
Nucleus | 0 | 1 | 0 | 0 | 2 | 1 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 2 | 2 | 1 | 0 | 2 | 0 | 1 | 0 | 4 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 1 | 2 | 2 | 9 | 10 | 23 | 36 | 22 | 24 | 18 | 30 | 1 | 0 | 3 | 4 | 7 | 17 | 0 | 2 | 0 | 5 | 4 | 4 |
Unique Cell Count | 135 | 184 | 292 | 291 | 445 | 440 | 633 | 547 | 402 | 548 | 402 | 456 | 483 | 621 | 571 | 162 | 255 | 202 | 134 | 179 | 294 | 314 | 315 | 460 |
Labelled Cell Count | 139 | 184 | 307 | 305 | 488 | 496 | 770 | 635 | 474 | 685 | 479 | 563 | 503 | 648 | 590 | 168 | 272 | 212 | 134 | 179 | 294 | 314 | 315 | 460 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 12.3 | 16.1 | 13.3 | 12.1 | 10.9 | 9.4 | 8.6 | 8.5 | 8.0 | 7.6 | 7.2 | 7.1 | 15.3 | 14.9 | 14.3 | 22.0 | 24.5 | 23.3 | 15.8 | 15.7 | 16.3 |
Std Deviation (1e-4) | 2.1 | 2.9 | 2.1 | 1.7 | 1.5 | 1.6 | 1.6 | 1.7 | 1.6 | 1.7 | 1.4 | 1.5 | 2.8 | 2.7 | 2.6 | 7.8 | 8.1 | 7.8 | 2.6 | 2.9 | 3.2 |
Intensity Change (Log2) | – | – | – | -0.14 | -0.29 | -0.51 | -0.63 | -0.64 | -0.73 | -0.81 | -0.9 | -0.91 | 0.2 | 0.16 | 0.1 | 0.73 | 0.88 | 0.81 | 0.24 | 0.24 | 0.29 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.3 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -2.3 | 0 | -1.9 | 1.0 | 1.5 | 1.0 | 1.6 | 1.5 | 1.0 | -0.9 | -0.5 | -0.9 | -1.3 | -0.1 | -1.0 |
Cytoplasm | 1.4 | -0.6 | -3.0 | -8.5 | -8.5 | -7.7 | -9.5 | -10.0 | -9.8 | 4.1 | 4.7 | 4.5 | 1.6 | 1.6 | -1.1 |
Endoplasmic Reticulum | -3.2 | -2.9 | -2.3 | 0.3 | 0.3 | -0.6 | -1.3 | -2.0 | -2.8 | -3.0 | -3.4 | -4.1 | -2.2 | -2.6 | -2.7 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 2.7 | 4.5 | 7.0 | 11.1 | 9.4 | 9.9 | 12.9 | 12.6 | 12.8 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 2.6 | 3.9 | 3.4 | 2.9 | 2.9 | 3.9 | 0 | 0 | 0 | 0 | 0 | 4.4 |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
---|
Gene | Images |
---|
Gene | Images |
---|