Standard name | |
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Human Ortholog | |
Description | Protein integral to the mitochondrial membrane; has a conserved methyltransferase motif and is predicted to be an RNA methyltransferase; multicopy suppressor of respiratory defects caused by OXA1 mutations |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 3 | 5 | 1 | 3 | 4 | 1 | 10 | 16 |
Bud | 1 | 1 | 7 | 5 | 2 | 3 | 6 | 8 | 5 | 9 | 2 | 11 | 4 | 4 | 1 | 14 | 3 | 7 | 0 | 1 | 0 | 0 | 3 | 5 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 1 | 7 |
Bud Site | 1 | 0 | 0 | 0 | 1 | 2 | 1 | 4 | 5 | 6 | 4 | 2 | 0 | 0 | 0 | 2 | 0 | 2 | – | – | – | – | – | – |
Cell Periphery | 0 | 3 | 6 | 4 | 3 | 2 | 2 | 3 | 1 | 11 | 2 | 2 | 10 | 11 | 7 | 29 | 23 | 12 | 0 | 0 | 0 | 0 | 1 | 3 |
Cytoplasm | 1 | 1 | 8 | 7 | 12 | 11 | 13 | 10 | 8 | 4 | 12 | 5 | 11 | 15 | 30 | 21 | 14 | 14 | 0 | 0 | 1 | 2 | 1 | 0 |
Endoplasmic Reticulum | 0 | 3 | 3 | 1 | 1 | 7 | 2 | 0 | 2 | 1 | 1 | 2 | 6 | 5 | 10 | 18 | 5 | 6 | 0 | 0 | 3 | 0 | 1 | 3 |
Endosome | 4 | 2 | 2 | 1 | 1 | 1 | 4 | 3 | 1 | 1 | 1 | 0 | 1 | 30 | 22 | 24 | 7 | 13 | 8 | 5 | 10 | 7 | 22 | 27 |
Golgi | 0 | 5 | 3 | 4 | 3 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 21 | 22 | 43 | 42 | 74 | 54 | 7 | 12 | 9 | 12 | 23 | 22 |
Mitochondria | 151 | 64 | 155 | 128 | 135 | 197 | 250 | 304 | 218 | 269 | 199 | 220 | 168 | 313 | 180 | 31 | 36 | 19 | 123 | 78 | 122 | 135 | 242 | 215 |
Nucleus | 4 | 1 | 1 | 1 | 1 | 3 | 2 | 5 | 3 | 6 | 3 | 1 | 1 | 0 | 0 | 10 | 2 | 7 | 0 | 0 | 0 | 0 | 2 | 0 |
Nuclear Periphery | 4 | 0 | 1 | 0 | 3 | 17 | 23 | 23 | 7 | 17 | 14 | 20 | 2 | 1 | 1 | 2 | 4 | 0 | 1 | 0 | 0 | 3 | 3 | 3 |
Nucleolus | 5 | 1 | 5 | 2 | 5 | 23 | 17 | 15 | 19 | 11 | 10 | 7 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 |
Peroxisomes | 3 | 0 | 4 | 1 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 1 | 21 | 12 | 21 | 5 | 17 | 4 | 4 | 20 | 6 | 18 | 19 |
SpindlePole | 0 | 0 | 2 | 0 | 2 | 1 | 2 | 4 | 3 | 5 | 0 | 1 | 1 | 2 | 0 | 32 | 16 | 13 | 1 | 0 | 0 | 1 | 2 | 1 |
Vac/Vac Membrane | 17 | 12 | 12 | 7 | 13 | 12 | 17 | 17 | 17 | 10 | 8 | 1 | 28 | 64 | 68 | 58 | 53 | 34 | 8 | 9 | 1 | 4 | 15 | 26 |
Unique Cell Count | 157 | 78 | 172 | 137 | 156 | 226 | 281 | 331 | 232 | 280 | 217 | 227 | 209 | 387 | 302 | 249 | 198 | 162 | 160 | 120 | 177 | 180 | 358 | 359 |
Labelled Cell Count | 191 | 94 | 209 | 161 | 183 | 280 | 342 | 397 | 289 | 350 | 256 | 273 | 256 | 489 | 375 | 306 | 246 | 204 | 160 | 120 | 177 | 180 | 358 | 359 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.1 | 6.1 | 5.8 | 6.1 | 6.2 | 5.7 | 5.1 | 5.3 | 5.0 | 4.3 | 4.7 | 4.5 | 6.5 | 6.2 | 6.3 | 6.3 | 7.5 | 7.4 | 5.7 | 6.0 | 6.5 |
Std Deviation (1e-4) | 0.7 | 1.1 | 1.5 | 1.6 | 1.5 | 1.7 | 1.4 | 1.5 | 1.6 | 1.2 | 1.3 | 1.2 | 1.1 | 1.3 | 1.3 | 1.2 | 1.3 | 1.4 | 1.1 | 1.6 | 1.4 |
Intensity Change (Log2) | – | – | – | 0.07 | 0.1 | -0.02 | -0.19 | -0.14 | -0.22 | -0.45 | -0.31 | -0.37 | 0.16 | 0.1 | 0.12 | 0.11 | 0.36 | 0.35 | -0.03 | 0.05 | 0.16 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | -0.2 | 0 | 0 | 0 | -1.0 | -1.1 | 0 | 0 | 0 | 0 | 0 | 0 | 0.7 | 0 | 0.1 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0.6 | -0.4 | 0 | 3.0 | 2.9 | 1.6 |
Cytoplasm | 0.2 | 1.1 | 0.1 | 0 | -0.9 | -0.6 | 0 | 0.4 | -1.4 | 0.3 | -0.4 | 2.0 | 1.5 | 1.0 | 1.5 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.5 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.1 | 2.9 | 3.6 | 0 | 3.0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3.3 | 2.1 | 4.4 | 4.9 | 8.4 | 7.7 |
Mitochondria | 1.0 | -1.0 | -0.9 | -0.4 | 0.7 | 1.4 | 0 | 0 | 0 | -2.6 | -2.7 | -7.0 | -15.8 | -13.8 | -14.3 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 3.3 | 3.5 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 2.8 | 1.5 | 0.9 | 2.2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1.6 | 1.0 | 2.6 | 0 | 3.1 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4.3 | 3.1 | 3.0 |
Vacuole | -0.7 | 0.5 | -0.7 | -0.4 | -0.8 | 0.1 | -1.6 | -1.5 | -3.6 | 2.0 | 3.0 | 4.3 | 4.4 | 5.0 | 3.7 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.7496 | 3.2975 | 2.9463 | 2.2651 | 2.7503 | 2.9724 | 4.5963 | 4.6904 | 4.6132 | 4.6908 | 4.4779 | 4.3525 | 6.5334 | 6.2709 | 6.0141 | 6.3205 | 5.6016 | 5.685 |
Actin | 0.0285 | 0.0053 | 0.0254 | 0.009 | 0.0016 | 0.0038 | 0.0596 | 0.0086 | 0.0159 | 0.0343 | 0.0007 | 0.0101 | 0.0239 | 0.0141 | 0.0247 | 0.0397 | 0.0064 | 0.0085 |
Bud | 0.0008 | 0.0007 | 0.007 | 0.0012 | 0.0003 | 0.0002 | 0.001 | 0.0011 | 0.0007 | 0.0004 | 0.0004 | 0.0004 | 0.0009 | 0.0012 | 0.003 | 0.0004 | 0.0003 | 0.0005 |
Bud Neck | 0.0011 | 0.0003 | 0.0006 | 0.0059 | 0.0001 | 0.0033 | 0.0011 | 0.0007 | 0.0006 | 0.0031 | 0 | 0.0013 | 0.004 | 0.001 | 0.0013 | 0.0006 | 0.0002 | 0.0004 |
Bud Periphery | 0.0021 | 0.0015 | 0.007 | 0.0034 | 0.0014 | 0.0006 | 0.0024 | 0.002 | 0.0017 | 0.0022 | 0.0022 | 0.0008 | 0.0017 | 0.0025 | 0.004 | 0.0038 | 0.0008 | 0.0007 |
Bud Site | 0.0064 | 0.0026 | 0.0098 | 0.001 | 0.0003 | 0.0006 | 0.0054 | 0.0067 | 0.0021 | 0.0008 | 0.0001 | 0.0009 | 0.0044 | 0.0344 | 0.0158 | 0.0018 | 0.0004 | 0.0006 |
Cell Periphery | 0.0009 | 0.0005 | 0.0022 | 0.0004 | 0.0003 | 0.0003 | 0.0008 | 0.0007 | 0.013 | 0.0012 | 0.0004 | 0.0002 | 0.0009 | 0.0023 | 0.0019 | 0.0049 | 0.0001 | 0.0003 |
Cytoplasm | 0.0024 | 0.0012 | 0.0013 | 0.0004 | 0.0004 | 0.0007 | 0.0051 | 0.0031 | 0.0018 | 0.0014 | 0.0015 | 0.0016 | 0.0082 | 0.0038 | 0.0042 | 0.0231 | 0.0002 | 0.0039 |
Cytoplasmic Foci | 0.0172 | 0.0179 | 0.0063 | 0.0075 | 0.0132 | 0.0132 | 0.0245 | 0.027 | 0.0237 | 0.0052 | 0.0083 | 0.0122 | 0.031 | 0.0219 | 0.0243 | 0.0037 | 0.0099 | 0.0194 |
Eisosomes | 0.0007 | 0.0002 | 0.0017 | 0.0005 | 0.0002 | 0.0006 | 0.0007 | 0.0002 | 0.0019 | 0.0073 | 0.0003 | 0.0002 | 0.0005 | 0.001 | 0.001 | 0.001 | 0.0001 | 0.0002 |
Endoplasmic Reticulum | 0.0037 | 0.0004 | 0.0004 | 0.0001 | 0.0003 | 0.0002 | 0.0032 | 0.0007 | 0.001 | 0.0002 | 0.0014 | 0.0005 | 0.0089 | 0.0014 | 0.0016 | 0.0136 | 0.0002 | 0.0004 |
Endosome | 0.0706 | 0.0563 | 0.0134 | 0.0058 | 0.0687 | 0.0249 | 0.0995 | 0.0842 | 0.035 | 0.0258 | 0.0537 | 0.0223 | 0.0794 | 0.0393 | 0.0595 | 0.0098 | 0.0288 | 0.0358 |
Golgi | 0.047 | 0.0423 | 0.027 | 0.0114 | 0.0544 | 0.0212 | 0.0738 | 0.0628 | 0.0423 | 0.0364 | 0.0547 | 0.0419 | 0.0595 | 0.0487 | 0.0541 | 0.0068 | 0.053 | 0.0495 |
Lipid Particles | 0.0398 | 0.0258 | 0.0059 | 0.0055 | 0.0172 | 0.0231 | 0.0416 | 0.022 | 0.0063 | 0.0014 | 0.0019 | 0.0056 | 0.0379 | 0.0112 | 0.0165 | 0.0015 | 0.0047 | 0.0147 |
Mitochondria | 0.7167 | 0.7874 | 0.8603 | 0.9126 | 0.8222 | 0.861 | 0.6069 | 0.7392 | 0.8186 | 0.8704 | 0.8477 | 0.8644 | 0.6372 | 0.7704 | 0.7446 | 0.8534 | 0.8589 | 0.8249 |
None | 0.0089 | 0.0002 | 0.0038 | 0.0005 | 0.0003 | 0.0015 | 0.0048 | 0.0008 | 0.0011 | 0.0012 | 0.002 | 0.0048 | 0.007 | 0.0118 | 0.0034 | 0.0105 | 0.0001 | 0.0013 |
Nuclear Periphery | 0.0082 | 0.0003 | 0.0003 | 0 | 0.0002 | 0.0004 | 0.0147 | 0.0002 | 0.0003 | 0 | 0.0008 | 0.0021 | 0.012 | 0.0004 | 0.0011 | 0.0044 | 0 | 0.0002 |
Nucleolus | 0.0012 | 0.0006 | 0.0002 | 0.0002 | 0.0001 | 0.0011 | 0.0027 | 0.0008 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0007 | 0.0016 | 0.0009 | 0.0002 | 0.0001 | 0.0002 |
Nucleus | 0.0015 | 0.0004 | 0.0003 | 0.0001 | 0.0001 | 0.0003 | 0.0027 | 0.0005 | 0.0003 | 0.0001 | 0.0001 | 0.0031 | 0.0099 | 0.0008 | 0.0006 | 0.0015 | 0.0001 | 0.0002 |
Peroxisomes | 0.0247 | 0.0262 | 0.0234 | 0.0325 | 0.0134 | 0.033 | 0.0254 | 0.0202 | 0.0209 | 0.005 | 0.0051 | 0.0166 | 0.0534 | 0.0167 | 0.0186 | 0.0144 | 0.0332 | 0.0294 |
Punctate Nuclear | 0.0016 | 0.0002 | 0.0001 | 0.0001 | 0.0002 | 0.0036 | 0.0052 | 0.0002 | 0.0003 | 0 | 0 | 0.0003 | 0.0034 | 0.0003 | 0.0044 | 0.0014 | 0 | 0.0002 |
Vacuole | 0.0088 | 0.0181 | 0.0014 | 0.0008 | 0.0021 | 0.0034 | 0.0122 | 0.0135 | 0.0092 | 0.0014 | 0.0078 | 0.0067 | 0.0094 | 0.0107 | 0.009 | 0.0018 | 0.0008 | 0.0038 |
Vacuole Periphery | 0.0071 | 0.0114 | 0.0022 | 0.0011 | 0.003 | 0.003 | 0.0066 | 0.0047 | 0.0031 | 0.0021 | 0.0105 | 0.0039 | 0.0058 | 0.0045 | 0.0053 | 0.0016 | 0.0017 | 0.0051 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 10.5197 | 13.2353 | 8.2704 | 10.0461 | 13.1342 | 10.9033 | 9.5084 | 12.835 | 12.2829 | 11.2271 |
Translational Efficiency | 0.9554 | 0.6104 | 1.002 | 1.1476 | 0.5079 | 0.8402 | 1.1745 | 0.8518 | 0.8916 | 0.9021 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✔ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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