Standard name
Description UBX domain-containing protein that interacts with Cdc48p; ubiquitin regulatory X is also known as UBX

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.93 0.97 0.99 0.96 0.96 0.86 0.8 0.7 0.75 0.76 0.55 0.67 0.98 1.0 0.98 0.93 0.94 0.74 0.81 0.66 0.83 0.79 0.83
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.08 0.07 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.13 0 0 0.1 0.07 0.27 0.32 0.35 0.38 0.43 0.61 0.5 0 0 0 0 0 0.14 0.06 0.18 0.08 0.07 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 5 6 1 2 4
Bud 1 0 2 0 3 1 2 10 10 8 7 9 1 0 0 0 0 1 9 1 1 3 4
Bud Neck 0 1 3 1 4 3 3 13 2 2 2 2 2 0 0 0 1 2 2 3 1 1 3
Bud Site 0 0 0 0 0 0 1 1 3 0 1 0 0 0 0 0 0
Cell Periphery 0 5 0 2 1 2 0 2 0 4 0 0 3 1 1 1 2 1 2 3 0 2 2
Cytoplasm 259 462 291 197 265 210 276 222 271 275 159 213 234 407 388 158 129 203 388 183 144 187 235
Endoplasmic Reticulum 1 5 1 0 0 0 0 2 1 0 5 0 1 0 2 14 10 2 0 2 0 0 2
Endosome 0 2 0 0 0 0 0 0 0 0 0 0 1 0 0 1 3 1 9 2 1 4 3
Golgi 0 1 0 1 0 0 0 0 0 1 0 0 0 0 4 1 1 2 1 0 0 1 0
Mitochondria 37 2 3 20 20 65 111 112 138 156 177 158 0 0 0 3 4 37 30 51 13 16 12
Nucleus 0 1 0 0 1 0 0 1 1 0 0 1 0 0 2 2 0 0 2 0 0 0 0
Nuclear Periphery 1 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0
Nucleolus 1 0 0 1 0 0 0 0 0 0 0 1 0 0 0 2 1 1 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0
SpindlePole 1 0 1 3 1 1 8 6 12 7 5 9 0 0 0 0 2 5 11 2 2 4 3
Vac/Vac Membrane 0 2 1 0 5 0 1 0 1 11 1 0 0 0 0 11 4 5 5 7 1 2 5
Unique Cell Count 278 474 294 205 277 245 343 317 363 362 290 316 239 407 394 169 137 276 481 278 174 238 284
Labelled Cell Count 301 481 302 225 301 283 402 369 439 464 358 393 242 408 397 193 157 276 481 278 174 238 284


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.1 4.0 3.2 3.0 3.2 2.9 2.3 2.5 2.7 2.4 2.5 2.4 4.3 4.0 4.3 4.6 5.9 5.8 3.4 3.9 4.4
Std Deviation (1e-4) 0.7 1.0 0.9 1.0 1.4 1.2 1.0 0.8 1.2 0.9 0.8 1.2 1.2 1.1 1.4 1.6 1.9 2.3 1.0 1.6 1.1
Intensity Change (Log2) -0.1 -0.02 -0.18 -0.47 -0.36 -0.26 -0.46 -0.39 -0.44 0.4 0.3 0.4 0.5 0.86 0.83 0.08 0.27 0.43


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole