Standard name
Description Strand exchange protein; forms a helical filament with DNA that searches for homology; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; homolog of Dmc1p and bacterial RecA protein

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.81 0.98 1.0 0.93 0.95 0.87 0.73 0.77 0.75 0.66 0.55 0.57 0.98 1.0 0.99 0.92 0.88 0.59 0.78 0.57 0.91 0.91 0.84
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.07 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0.31 0.06 0 0.12 0.06 0.34 0.43 0.31 0.4 0.5 0.68 0.6 0 0 0 0 0 0.21 0.1 0.22 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06 0.05 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 2 1 7 0 1 3
Bud 2 0 0 3 4 4 17 9 9 9 10 2 0 0 2 0 0 0 0 5 0 1 13
Bud Neck 0 0 0 2 3 2 3 1 3 1 0 1 1 5 0 0 0 0 1 4 0 0 2
Bud Site 0 0 0 0 1 1 1 7 0 2 1 2 0 0 0 0 0
Cell Periphery 0 0 2 1 3 0 0 0 1 0 0 1 2 8 1 6 1 0 0 4 0 0 2
Cytoplasm 101 124 252 213 300 284 340 347 258 252 139 174 253 421 450 130 89 82 105 144 108 224 313
Endoplasmic Reticulum 1 0 0 0 0 0 0 0 0 0 0 3 2 1 0 7 7 4 0 2 0 2 1
Endosome 0 0 1 0 4 0 1 0 1 0 1 0 1 0 2 2 4 2 3 5 0 1 1
Golgi 0 0 1 1 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 3 0 0 0
Mitochondria 38 8 2 27 20 112 200 139 137 191 172 183 0 1 1 3 3 29 13 55 2 6 9
Nucleus 0 0 0 1 1 1 2 3 1 1 2 1 0 0 2 0 0 0 0 0 1 0 0
Nuclear Periphery 0 0 0 1 0 0 0 1 0 0 0 2 0 0 1 0 0 1 0 1 0 0 2
Nucleolus 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1
Peroxisomes 0 0 0 0 0 0 1 0 0 1 0 0 0 1 0 1 0 1 0 0 0 0 0
SpindlePole 1 0 3 2 3 2 7 27 11 10 6 9 0 0 0 1 3 3 2 5 0 1 8
Vac/Vac Membrane 0 0 1 1 0 1 2 8 0 2 4 4 0 0 0 8 5 4 4 6 1 3 2
Unique Cell Count 124 127 253 228 315 328 463 448 345 382 252 304 257 423 455 141 101 140 136 253 120 248 374
Labelled Cell Count 143 132 262 253 340 407 575 543 421 470 335 383 260 437 460 160 112 140 136 253 120 248 374


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 3.1 3.9 4.1 3.4 3.7 3.0 3.0 3.0 2.8 2.7 2.5 2.5 4.7 4.7 4.8 4.8 5.1 5.8 4.2 4.8 5.4
Std Deviation (1e-4) 0.6 0.9 4.5 1.5 1.7 1.2 1.6 1.8 1.4 1.2 1.3 1.2 1.0 1.2 1.2 1.3 1.5 2.6 1.3 1.2 1.4
Intensity Change (Log2) -0.25 -0.15 -0.45 -0.46 -0.43 -0.55 -0.59 -0.69 -0.7 0.22 0.2 0.22 0.23 0.33 0.51 0.04 0.24 0.4


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Actin
Bud
Bud Neck
Bud Site
Cell Periphery
Cyto
Endoplasmic Reticulum
Endosome
Golgi
Mitochondria
Nuclear Periphery
Nuc
Nucleolus
Peroxisomes
SpindlePole
Vac
Cortical Patches
Cytoplasm
Nucleus
Vacuole


Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rad51-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available