Standard name | |
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Human Ortholog | |
Description | Glycogen synthase; expression induced by glucose limitation, nitrogen starvation, environmental stress, and entry into stationary phase; GSY1 has a paralog, GSY2, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasmic foci upon DNA replication stress |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 3 | 1 | 5 | 4 | 28 | – | 25 | 14 | 10 | 13 | 4 | 10 | 10 | 1 | 0 | 0 | 1 | 1 | 4 | 2 | 7 | 3 |
Bud | 4 | 3 | 2 | 1 | 2 | 6 | 18 | – | 24 | 24 | 18 | 26 | 2 | 13 | 12 | 0 | 0 | 0 | 3 | 4 | 3 | 2 | 7 | 12 |
Bud Neck | 3 | 0 | 13 | 10 | 18 | 6 | 21 | – | 6 | 1 | 2 | 3 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 1 | 2 | 1 | 3 | 4 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | 4 | – | 2 | 2 | 2 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 2 | 3 | 9 | 5 | 7 | 5 | 13 | – | 20 | 28 | 21 | 43 | 2 | 8 | 18 | 10 | 5 | 6 | 1 | 0 | 7 | 2 | 3 | 2 |
Cytoplasm | 349 | 329 | 479 | 430 | 480 | 576 | 680 | – | 343 | 337 | 238 | 311 | 368 | 315 | 353 | 338 | 247 | 225 | 315 | 307 | 405 | 217 | 259 | 298 |
Endoplasmic Reticulum | 2 | 3 | 6 | 2 | 2 | 1 | 9 | – | 7 | 11 | 7 | 8 | 2 | 3 | 8 | 24 | 14 | 16 | 2 | 1 | 2 | 3 | 7 | 3 |
Endosome | 2 | 0 | 0 | 0 | 0 | 4 | 5 | – | 2 | 2 | 1 | 5 | 1 | 7 | 14 | 3 | 4 | 3 | 5 | 3 | 6 | 2 | 1 | 1 |
Golgi | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 | 1 | 1 | 1 | 1 | 1 | 0 | 2 |
Mitochondria | 6 | 4 | 0 | 3 | 2 | 48 | 94 | – | 188 | 211 | 224 | 185 | 4 | 6 | 10 | 8 | 4 | 4 | 20 | 11 | 35 | 25 | 30 | 22 |
Nucleus | 2 | 3 | 1 | 0 | 2 | 3 | 1 | – | 3 | 3 | 4 | 2 | 1 | 0 | 3 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 4 | 1 | 2 | 0 | 0 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 9 | 7 | – | 4 | 2 | 1 | 3 | 0 | 7 | 3 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 2 | 0 | 3 | 2 | 10 | 11 | 35 | – | 16 | 7 | 3 | 15 | 1 | 4 | 9 | 1 | 2 | 1 | 9 | 1 | 7 | 1 | 2 | 3 |
Vac/Vac Membrane | 1 | 0 | 1 | 0 | 0 | 8 | 7 | – | 4 | 16 | 28 | 28 | 1 | 2 | 4 | 2 | 6 | 6 | 4 | 4 | 2 | 13 | 16 | 14 |
Unique Cell Count | 363 | 334 | 489 | 436 | 501 | 632 | 796 | 533 | 539 | 464 | 534 | 378 | 353 | 412 | 350 | 262 | 237 | 373 | 344 | 489 | 278 | 346 | 378 | |
Labelled Cell Count | 374 | 345 | 517 | 455 | 528 | 682 | 922 | 645 | 662 | 562 | 646 | 387 | 375 | 445 | 391 | 285 | 264 | 373 | 344 | 489 | 278 | 346 | 378 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 4.3 | 4.9 | 5.0 | 4.3 | 4.9 | 4.2 | 4.3 | – | 4.1 | 4.3 | 4.1 | 4.8 | 4.3 | 4.9 | 5.0 | 6.0 | 6.2 | 6.4 | 3.9 | 4.1 | 4.5 |
Std Deviation (1e-4) | 1.7 | 1.0 | 0.9 | 1.0 | 1.1 | 1.2 | 1.1 | – | 1.2 | 1.2 | 1.0 | 1.1 | 1.0 | 1.7 | 1.4 | 1.4 | 1.6 | 1.9 | 1.1 | 1.3 | 1.8 |
Intensity Change (Log2) | – | – | – | -0.23 | -0.03 | -0.26 | -0.21 | – | -0.27 | -0.21 | -0.28 | -0.04 | -0.21 | -0.03 | 0.0 | 0.28 | 0.31 | 0.37 | -0.36 | -0.29 | -0.13 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cytoplasm | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vacuole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 2.4073 | 3.041 | 2.56 | 1.8349 | 2.6807 | 2.5796 | 2.2107 | 1.9467 | 1.9231 | 1.4472 | 1.5903 | 1.954 | 3.6807 | 4.4277 | 4.3098 | 4.2976 | 4.224 | 3.9396 |
Actin | 0.0408 | 0.0042 | 0.0329 | 0.0033 | 0.061 | 0.0011 | 0.0563 | 0.0067 | 0.0275 | 0.0035 | 0.035 | 0.0197 | 0.0005 | 0.0091 | 0.0079 | 0.018 | 0.0047 | 0.0049 |
Bud | 0.0026 | 0.0019 | 0.0014 | 0.0013 | 0.0007 | 0.0011 | 0.0006 | 0.0021 | 0.0014 | 0.0011 | 0.0043 | 0.0017 | 0.0003 | 0.0018 | 0.0033 | 0.0027 | 0.0025 | 0.0006 |
Bud Neck | 0.006 | 0.0004 | 0.007 | 0.0005 | 0.0006 | 0.0009 | 0.002 | 0.0003 | 0.0005 | 0.0006 | 0.0255 | 0.0053 | 0.0002 | 0.0006 | 0.0011 | 0.0004 | 0.0007 | 0.0017 |
Bud Periphery | 0.0035 | 0.0014 | 0.0012 | 0.0014 | 0.0005 | 0.004 | 0.0007 | 0.001 | 0.0013 | 0.0021 | 0.0059 | 0.0023 | 0.0002 | 0.0009 | 0.0051 | 0.0049 | 0.0034 | 0.0009 |
Bud Site | 0.0108 | 0.0071 | 0.0164 | 0.0012 | 0.0018 | 0.0003 | 0.0085 | 0.0189 | 0.0145 | 0.0012 | 0.0147 | 0.0084 | 0.0006 | 0.022 | 0.0064 | 0.0003 | 0.0013 | 0.0005 |
Cell Periphery | 0.0009 | 0.0009 | 0.0006 | 0.0004 | 0.0003 | 0.0003 | 0.0003 | 0.0005 | 0.0004 | 0.0002 | 0.0004 | 0.0004 | 0.0002 | 0.0014 | 0.0013 | 0.0001 | 0.0004 | 0.0012 |
Cytoplasm | 0.5733 | 0.8214 | 0.6977 | 0.7544 | 0.7978 | 0.8445 | 0.4947 | 0.7973 | 0.7697 | 0.6964 | 0.5943 | 0.7643 | 0.8308 | 0.8007 | 0.8375 | 0.75 | 0.8981 | 0.8787 |
Cytoplasmic Foci | 0.0366 | 0.0264 | 0.0206 | 0.0194 | 0.0172 | 0.0172 | 0.0486 | 0.0161 | 0.0138 | 0.018 | 0.031 | 0.0328 | 0.0474 | 0.058 | 0.032 | 0.0468 | 0.0401 | 0.0315 |
Eisosomes | 0.0003 | 0.0001 | 0.0002 | 0 | 0 | 0 | 0.0005 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0 | 0 | 0 | 0.0001 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0108 | 0.0037 | 0.0066 | 0.0046 | 0.0032 | 0.0059 | 0.0054 | 0.0025 | 0.0047 | 0.0045 | 0.0037 | 0.0043 | 0.0093 | 0.0026 | 0.0059 | 0.003 | 0.0023 | 0.0049 |
Endosome | 0.0606 | 0.0138 | 0.0186 | 0.0508 | 0.0419 | 0.029 | 0.0576 | 0.0048 | 0.0109 | 0.066 | 0.044 | 0.0182 | 0.0094 | 0.0109 | 0.0082 | 0.0072 | 0.0101 | 0.011 |
Golgi | 0.0123 | 0.0034 | 0.0073 | 0.0119 | 0.0021 | 0.0026 | 0.035 | 0.0006 | 0.0026 | 0.0475 | 0.0224 | 0.009 | 0.0007 | 0.0017 | 0.0008 | 0.0013 | 0.0009 | 0.0016 |
Lipid Particles | 0.0053 | 0.0014 | 0.0029 | 0.003 | 0.0014 | 0.0005 | 0.0304 | 0.0002 | 0.001 | 0.0013 | 0.0046 | 0.0016 | 0.0005 | 0.0005 | 0.0005 | 0.0007 | 0.0003 | 0.0004 |
Mitochondria | 0.0212 | 0.0087 | 0.0043 | 0.0419 | 0.0005 | 0.0079 | 0.007 | 0.0003 | 0.0071 | 0.0073 | 0.0168 | 0.0113 | 0.0005 | 0.0003 | 0.0004 | 0.0006 | 0.0006 | 0.0009 |
None | 0.1401 | 0.0912 | 0.1642 | 0.0887 | 0.055 | 0.0755 | 0.1596 | 0.143 | 0.1339 | 0.1373 | 0.1353 | 0.1105 | 0.0911 | 0.07 | 0.0804 | 0.1432 | 0.0265 | 0.0492 |
Nuclear Periphery | 0.0104 | 0.001 | 0.0037 | 0.0017 | 0.001 | 0.0012 | 0.0194 | 0.0006 | 0.0012 | 0.0013 | 0.0022 | 0.0005 | 0.0014 | 0.0008 | 0.0013 | 0.0009 | 0.0009 | 0.001 |
Nucleolus | 0.0012 | 0.0001 | 0.0003 | 0.0001 | 0.0001 | 0.0001 | 0.0011 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0001 |
Nucleus | 0.0204 | 0.0016 | 0.003 | 0.0014 | 0.0013 | 0.0015 | 0.0415 | 0.0009 | 0.0011 | 0.001 | 0.0019 | 0.0013 | 0.0015 | 0.0019 | 0.002 | 0.0014 | 0.0016 | 0.0023 |
Peroxisomes | 0.0118 | 0.006 | 0.0028 | 0.0041 | 0.0015 | 0.0005 | 0.0085 | 0.0002 | 0.0026 | 0.0007 | 0.0009 | 0.0052 | 0.0006 | 0.005 | 0.0012 | 0.0108 | 0.0016 | 0.0024 |
Punctate Nuclear | 0.0117 | 0.0008 | 0.0045 | 0.0004 | 0.0005 | 0.0006 | 0.0164 | 0.0005 | 0.0009 | 0.0008 | 0.0014 | 0.0012 | 0.0009 | 0.009 | 0.001 | 0.0053 | 0.0012 | 0.0041 |
Vacuole | 0.0147 | 0.0039 | 0.0031 | 0.0066 | 0.0107 | 0.0042 | 0.004 | 0.0029 | 0.0038 | 0.0071 | 0.0336 | 0.0015 | 0.0033 | 0.0025 | 0.0033 | 0.0019 | 0.0022 | 0.0017 |
Vacuole Periphery | 0.0047 | 0.0005 | 0.0007 | 0.0026 | 0.001 | 0.0012 | 0.0018 | 0.0004 | 0.0005 | 0.002 | 0.0214 | 0.0004 | 0.0004 | 0.0003 | 0.0004 | 0.0004 | 0.0005 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 3.6313 | 1.855 | 10.6676 | 29.1754 | 14.1245 | 8.8141 | 9.7294 | 18.3551 | 32.9561 | 9.7909 |
Translational Efficiency | – | – | – | – | – | – | – | – | – | – |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | – |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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