Standard name | |
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Human Ortholog | |
Description | Histone H3; core histone protein required for chromatin assembly, part of heterochromatin-mediated telomeric and HM silencing; one of two identical histone H3 proteins (see HHT2); regulated by acetylation, methylation, and phosphorylation; H3K14 acetylation plays an important role in the unfolding of strongly positioned nucleosomes during repair of UV damage |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 1 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 1 | 5 | 0 | 2 | 0 |
Bud | 0 | 1 | 3 | 5 | 1 | 5 | – | 23 | 6 | 16 | 16 | 11 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 3 | 2 | 4 | 9 |
Bud Neck | 2 | 0 | 2 | 0 | 0 | 0 | – | 8 | 0 | 1 | 3 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 1 | 0 | 1 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 1 | – | 1 | 4 | 2 | 2 | 7 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 2 | 0 | 2 | 3 | 1 | 0 | – | 6 | 0 | 2 | 1 | 2 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 0 | 3 | 1 | 0 | 0 |
Cytoplasm | 354 | 187 | 185 | 228 | 281 | 295 | – | 440 | 227 | 326 | 157 | 218 | 211 | 278 | 348 | 20 | 36 | 38 | 305 | 160 | 126 | 130 | 205 | 207 |
Endoplasmic Reticulum | 0 | 1 | 1 | 0 | 1 | 1 | – | 2 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 | 1 | 3 | 0 | 1 | 2 | 0 | 1 | 0 |
Endosome | 0 | 1 | 0 | 0 | 7 | 1 | – | 8 | 0 | 1 | 0 | 3 | 0 | 1 | 1 | 0 | 2 | 2 | 1 | 1 | 4 | 1 | 0 | 4 |
Golgi | 0 | 0 | 0 | 0 | 1 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 1 | 1 | 1 |
Mitochondria | 8 | 3 | 25 | 58 | 35 | 141 | – | 247 | 198 | 251 | 189 | 274 | 1 | 1 | 0 | 1 | 0 | 1 | 17 | 17 | 26 | 6 | 19 | 14 |
Nucleus | 0 | 0 | 0 | 1 | 2 | 1 | – | 4 | 1 | 2 | 2 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 2 |
Nuclear Periphery | 0 | 0 | 0 | 1 | 0 | 0 | – | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
Nucleolus | 0 | 0 | 0 | 0 | 1 | 0 | – | 3 | 1 | 1 | 3 | 1 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
Peroxisomes | 1 | 0 | 0 | 0 | 2 | 0 | – | 2 | 0 | 1 | 0 | 2 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 2 | 0 | 0 | 4 | – | 20 | 5 | 11 | 17 | 18 | 0 | 0 | 1 | 0 | 0 | 0 | 5 | 2 | 4 | 1 | 0 | 2 |
Vac/Vac Membrane | 0 | 1 | 1 | 1 | 1 | 6 | – | 7 | 6 | 7 | 4 | 3 | 0 | 1 | 0 | 0 | 0 | 4 | 2 | 3 | 4 | 4 | 6 | 6 |
Unique Cell Count | 360 | 193 | 199 | 239 | 304 | 365 | 628 | 352 | 480 | 294 | 419 | 212 | 282 | 350 | 20 | 38 | 43 | 348 | 193 | 197 | 156 | 250 | 263 | |
Labelled Cell Count | 367 | 195 | 221 | 297 | 333 | 455 | 771 | 450 | 622 | 395 | 543 | 212 | 284 | 352 | 25 | 39 | 50 | 348 | 193 | 197 | 156 | 250 | 263 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 3.4 | 4.0 | 3.2 | 3.2 | 4.2 | 3.1 | – | 3.1 | 2.6 | 3.0 | 2.8 | 2.6 | 4.5 | 4.5 | 4.6 | 5.0 | 5.5 | 5.7 | 4.3 | 4.6 | 4.8 |
Std Deviation (1e-4) | 0.4 | 0.6 | 1.6 | 1.9 | 2.7 | 2.0 | – | 1.9 | 1.5 | 1.8 | 1.9 | 1.2 | 2.3 | 2.2 | 2.3 | 0.6 | 1.9 | 1.9 | 2.2 | 2.3 | 2.3 |
Intensity Change (Log2) | – | – | – | 0.01 | 0.41 | -0.05 | – | -0.02 | -0.28 | -0.08 | -0.17 | -0.3 | 0.51 | 0.49 | 0.52 | 0.66 | 0.79 | 0.84 | 0.43 | 0.52 | 0.58 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Neck | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud Site | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cell Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endosome | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Golgi | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Mitochondria | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuclear Periphery | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Peroxisomes | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
SpindlePole | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.7461 | -0.9216 | -0.6884 | -1.0851 | -0.9571 | -0.7339 | -0.9151 | -1.0043 | -0.9867 | -1.1822 | -0.4938 | -1.1906 | -0.0828 | 0.2062 | -0.0812 | 0.1821 | 0.3886 | 0.0995 |
Actin | 0.0261 | 0.0001 | 0.0061 | 0.0074 | 0.0079 | 0.0098 | 0.0287 | 0.0003 | 0.0108 | 0.0092 | 0.0137 | 0.0035 | 0.0053 | 0.0001 | 0.0019 | 0.0414 | 0.0088 | 0.0015 |
Bud | 0.002 | 0.0003 | 0.0015 | 0.0018 | 0.0069 | 0.0002 | 0.0017 | 0.0021 | 0.0018 | 0.0013 | 0.0016 | 0.0013 | 0.0011 | 0 | 0.0007 | 0.0042 | 0.0013 | 0.0001 |
Bud Neck | 0.0022 | 0.0001 | 0.0031 | 0.0012 | 0.001 | 0.0004 | 0.0038 | 0.0012 | 0.0015 | 0.0002 | 0.0001 | 0.0008 | 0.0183 | 0.0001 | 0.0015 | 0.0006 | 0.0003 | 0.0048 |
Bud Periphery | 0.0077 | 0.0003 | 0.0023 | 0.0042 | 0.0118 | 0.0006 | 0.0029 | 0.0027 | 0.0044 | 0.0181 | 0.0038 | 0.0012 | 0.0027 | 0.0001 | 0.0031 | 0.0114 | 0.0011 | 0.0003 |
Bud Site | 0.0101 | 0.008 | 0.0112 | 0.0524 | 0.003 | 0.0002 | 0.0137 | 0.0106 | 0.0088 | 0.0018 | 0.0013 | 0.0008 | 0.0106 | 0.0058 | 0.0063 | 0.0134 | 0.009 | 0.0001 |
Cell Periphery | 0.0007 | 0.0001 | 0.0005 | 0.0005 | 0.0005 | 0.0002 | 0.0004 | 0.0001 | 0.0002 | 0.0003 | 0.0001 | 0.0001 | 0.0015 | 0.0001 | 0.0002 | 0.0004 | 0.0001 | 0.0001 |
Cytoplasm | 0.0384 | 0.0328 | 0.0303 | 0.0138 | 0.0287 | 0.0537 | 0.0297 | 0.0239 | 0.0369 | 0.0314 | 0.0456 | 0.0578 | 0.0261 | 0.027 | 0.0245 | 0.0654 | 0.0309 | 0.0661 |
Cytoplasmic Foci | 0.0328 | 0.0077 | 0.0225 | 0.0282 | 0.0525 | 0.0255 | 0.0296 | 0.0035 | 0.0162 | 0.0116 | 0.0081 | 0.0093 | 0.0197 | 0.0009 | 0.0038 | 0.0119 | 0.037 | 0.0027 |
Eisosomes | 0.0005 | 0.0001 | 0.0003 | 0.0005 | 0.0001 | 0.0002 | 0.0006 | 0.0002 | 0.0002 | 0.0002 | 0.0003 | 0.0001 | 0.0003 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0001 |
Endoplasmic Reticulum | 0.0054 | 0.0004 | 0.0022 | 0.001 | 0.0017 | 0.0004 | 0.0036 | 0.0002 | 0.0007 | 0.001 | 0.0014 | 0.0004 | 0.0008 | 0.0002 | 0.0003 | 0.0003 | 0.0004 | 0.0002 |
Endosome | 0.0277 | 0.0005 | 0.0185 | 0.0017 | 0.0226 | 0.0055 | 0.0291 | 0.0001 | 0.011 | 0.0111 | 0.0297 | 0.003 | 0.0174 | 0.0001 | 0.0071 | 0.0009 | 0.0246 | 0.0003 |
Golgi | 0.0066 | 0.0001 | 0.0118 | 0.0012 | 0.0134 | 0.0059 | 0.0101 | 0 | 0.0077 | 0.0048 | 0.0082 | 0.002 | 0.0064 | 0 | 0.0062 | 0.0006 | 0.0311 | 0.0003 |
Lipid Particles | 0.0131 | 0.0007 | 0.0083 | 0.0046 | 0.0477 | 0.0051 | 0.0194 | 0.0002 | 0.0077 | 0.0066 | 0.0013 | 0.002 | 0.0046 | 0.0001 | 0.0008 | 0.001 | 0.0053 | 0.0001 |
Mitochondria | 0.0131 | 0.0005 | 0.0177 | 0.0028 | 0.0464 | 0.0028 | 0.0173 | 0.0006 | 0.0064 | 0.0045 | 0.0135 | 0.0013 | 0.0015 | 0.0001 | 0.0015 | 0.0027 | 0.0069 | 0.0005 |
None | 0.7647 | 0.9437 | 0.8476 | 0.8496 | 0.6685 | 0.8616 | 0.7728 | 0.9492 | 0.8627 | 0.8558 | 0.8316 | 0.8975 | 0.8675 | 0.9646 | 0.9399 | 0.828 | 0.8148 | 0.9193 |
Nuclear Periphery | 0.0172 | 0.0002 | 0.0011 | 0.0018 | 0.0037 | 0.0036 | 0.0073 | 0.0004 | 0.0011 | 0.0039 | 0.0237 | 0.001 | 0.0009 | 0.0001 | 0.0001 | 0.0003 | 0.0003 | 0.0001 |
Nucleolus | 0.0007 | 0.0004 | 0.0012 | 0.001 | 0.0009 | 0.0003 | 0.001 | 0.0006 | 0.001 | 0.0003 | 0.0004 | 0.0006 | 0.0009 | 0.0001 | 0.0001 | 0.007 | 0.0002 | 0.0001 |
Nucleus | 0.0024 | 0.0007 | 0.0014 | 0.0011 | 0.0032 | 0.0006 | 0.0025 | 0.0008 | 0.0031 | 0.0009 | 0.0065 | 0.0027 | 0.001 | 0.0002 | 0.0002 | 0.0021 | 0.0003 | 0.0015 |
Peroxisomes | 0.0194 | 0.0012 | 0.0054 | 0.0135 | 0.0576 | 0.0144 | 0.0171 | 0.0002 | 0.0139 | 0.0323 | 0.0027 | 0.0016 | 0.0039 | 0 | 0.0009 | 0.0049 | 0.0252 | 0.001 |
Punctate Nuclear | 0.0029 | 0.0017 | 0.003 | 0.011 | 0.0059 | 0.0014 | 0.0047 | 0.0023 | 0.0021 | 0.0036 | 0.0011 | 0.0125 | 0.004 | 0.0002 | 0.0001 | 0.0012 | 0.0007 | 0.0005 |
Vacuole | 0.0041 | 0.0003 | 0.0031 | 0.0006 | 0.0123 | 0.0062 | 0.0027 | 0.0004 | 0.0015 | 0.0006 | 0.0038 | 0.0005 | 0.005 | 0.0001 | 0.0005 | 0.0019 | 0.0011 | 0.0001 |
Vacuole Periphery | 0.0022 | 0 | 0.0007 | 0.0003 | 0.0038 | 0.0015 | 0.0015 | 0.0002 | 0.0004 | 0.0006 | 0.0015 | 0.0001 | 0.0004 | 0 | 0.0001 | 0.0002 | 0.0004 | 0 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 1916.8632 | 1195.1711 | 188.7712 | 188.9763 | 1823.9434 | 1046.4465 | 756.486 | 524.0887 | 390.6922 | 1330.9675 |
Translational Efficiency | 1.695 | 1.6421 | 1.851 | 1.7371 | 1.593 | 2.3914 | 1.7238 | 1.6635 | 1.5711 | 1.792 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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