Standard name
Human Ortholog
Description GTPase-activating protein (RhoGAP) for Rho3p and Rho4p; possibly involved in control of actin cytoskeleton organization
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0.1 0.13 0.12 0.12 0.06 0 0 0.08 0 0 0 0.05 0.1 0.08 0.06 0.06 0.1 0.06 0.12 0.12 0.09 0.17 0.22 0.19
Bud 0.1 0.07 0 0.12 0.05 0 0 0.05 0 0 0.08 0.06 0.05 0 0 0 0 0 0.1 0.11 0.15 0.15 0.12 0.11
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.09 0.1 0.09 0.13 0.12 0.06
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0.08 0.06 0.06 0 0 0.05 0.05 0.08 0.06 0.06 0.07 0.06 0.1 0.1 0 0 0 0 0 0
Cytoplasm 0.65 0.73 0.83 0.78 0.76 0.78 0.77 0.7 0.69 0.68 0.53 0.55 0.85 0.88 0.89 0.57 0.64 0.64 0.52 0.51 0.39 0.32 0.4 0.48
Endoplasmic Reticulum 0.05 0.09 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0.06 0 0.07 0 0 0 0 0 0
Endosome 0.14 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0 0.11 0 0 0.05 0.06 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0
Mitochondria 0.09 0 0 0 0 0.11 0.13 0.13 0.21 0.2 0.51 0.36 0 0 0 0 0 0 0 0 0.09 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.06 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0.05 0 0 0.05 0 0 0 0 0 0 0 0.09 0.08 0.08 0 0 0 0.05 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0.05 0 0.08 0 0.05 0 0 0 0.13 0.09 0.07 0 0.05 0.05 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 21 34 3 6 12 7 12 23 8 9 7 15 24 31 23 10 14 6 28 35 7 34 61 65
Bud 21 18 0 6 9 4 9 14 10 8 19 16 13 10 10 6 4 3 23 31 11 29 32 36
Bud Neck 0 1 0 0 1 1 0 2 0 1 1 1 0 0 0 1 0 0 19 29 7 26 34 20
Bud Site 1 4 0 0 0 1 1 2 2 2 1 1 1 1 0 1 0 0 – – – – – –
Cell Periphery 4 9 1 1 15 9 17 11 9 14 12 21 14 23 28 10 15 10 3 1 1 1 2 2
Cytoplasm 130 185 20 39 148 125 206 209 157 180 133 153 211 322 359 100 93 67 118 151 31 64 113 162
Endoplasmic Reticulum 10 24 0 0 3 6 9 10 12 8 5 9 5 8 4 11 6 7 7 9 2 2 7 11
Endosome 28 6 0 1 6 4 6 3 4 2 4 5 9 3 9 13 5 11 9 8 3 10 10 13
Golgi 0 1 0 0 1 0 2 0 0 1 0 0 0 2 2 6 5 5 0 4 0 0 0 0
Mitochondria 17 5 0 2 4 18 35 40 49 53 128 99 2 0 0 7 3 2 8 3 7 8 5 6
Nucleus 0 0 0 0 3 1 0 1 2 3 1 2 0 2 0 1 1 1 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0
Nucleolus 3 0 0 0 1 2 0 2 1 1 1 0 0 1 0 3 0 0 0 0 0 0 0 0
Peroxisomes 7 6 0 0 5 2 3 2 5 3 2 4 3 4 4 9 8 0 0 0 0 0 0 1
SpindlePole 2 0 0 1 9 7 4 15 6 8 2 3 9 10 13 15 11 8 2 1 0 10 2 3
Vac/Vac Membrane 0 4 0 2 8 4 9 15 6 20 11 13 2 1 2 22 13 7 4 13 3 3 6 6
Unique Cell Count 200 255 24 50 195 161 268 297 229 264 253 278 248 368 404 174 145 104 229 296 80 198 282 340
Labelled Cell Count 244 297 24 58 225 191 313 350 271 313 327 342 293 418 454 215 178 127 229 296 80 198 282 340


Ambiguous, Bud, Bud Neck, Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 6.6 8.2 8.8 7.4 8.6 7.2 6.8 6.9 6.2 6.0 5.4 5.7 8.6 8.6 8.4 9.9 11.0 9.8 8.1 8.3 8.4
Std Deviation (1e-4) 0.9 1.2 1.6 1.4 1.9 1.7 1.8 1.5 2.0 1.6 1.5 1.5 1.3 1.3 1.4 2.2 3.4 2.1 1.1 1.3 1.5
Intensity Change (Log2) – – – -0.26 -0.04 -0.29 -0.37 -0.35 -0.52 -0.55 -0.7 -0.63 -0.05 -0.04 -0.07 0.16 0.31 0.15 -0.12 -0.08 -0.07


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -0.5 -0.8 -0.6 -0.7 -1.4 -1.5 -1.5 -2.9 -2.7 0.2 0.6 0.8 -2.4 -1.9 -1.8
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 4.8 3.6 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 2.0926 2.3539 1.9086 1.8532 1.9278 2.3542 2.7467 3.0405 2.8226 2.765 2.441 2.8246 2.8332 2.6499 2.4664 2.6809 2.1789 2.5514
Actin 0.0963 0.0423 0.0949 0.0966 0.1226 0.0506 0.0884 0.0156 0.078 0.0458 0.0751 0.037 0.0723 0.0334 0.1061 0.0672 0.0656 0.0633
Bud 0.0079 0.0167 0.1546 0.0239 0.0098 0.002 0.0396 0.0272 0.1964 0.0449 0.0393 0.0094 0.0191 0.015 0.1497 0.03 0.0052 0.0055
Bud Neck 0.0257 0.0052 0.0042 0.0043 0.0012 0.408 0.0196 0.0035 0.0013 0.0038 0.0332 0.3979 0.0355 0.0082 0.0075 0.0286 0.1397 0.4065
Bud Periphery 0.0107 0.0181 0.2453 0.0454 0.0062 0.0033 0.0324 0.0158 0.2797 0.1378 0.0444 0.0098 0.0399 0.014 0.209 0.0679 0.0059 0.0071
Bud Site 0.0713 0.2229 0.0479 0.0042 0.0044 0.0033 0.0836 0.3258 0.0575 0.0158 0.0253 0.0073 0.0957 0.2545 0.0454 0.0082 0.0363 0.0091
Cell Periphery 0.0058 0.0066 0.0072 0.0027 0.0012 0.002 0.0068 0.0043 0.0031 0.0049 0.0019 0.0016 0.0052 0.0026 0.0041 0.004 0.0012 0.0012
Cytoplasm 0.4562 0.5537 0.244 0.6547 0.2976 0.3938 0.4307 0.5276 0.2995 0.5437 0.4805 0.4329 0.4439 0.5413 0.3441 0.607 0.5747 0.3427
Cytoplasmic Foci 0.0891 0.0459 0.0281 0.021 0.1326 0.0411 0.0799 0.0303 0.0201 0.0546 0.1093 0.0588 0.1001 0.0399 0.0244 0.034 0.0686 0.0677
Eisosomes 0.0005 0.0004 0.0004 0.0003 0.0022 0.0001 0.0007 0.0001 0.0002 0.0002 0.0002 0.0001 0.0005 0.0001 0.0002 0.0002 0.0005 0.0001
Endoplasmic Reticulum 0.0147 0.0076 0.0069 0.0049 0.0094 0.0056 0.0129 0.0028 0.0028 0.0056 0.0026 0.0022 0.0113 0.004 0.0052 0.0051 0.0023 0.0031
Endosome 0.0625 0.0162 0.0454 0.037 0.1331 0.0309 0.0632 0.0127 0.0084 0.0347 0.0322 0.0089 0.0363 0.0136 0.0157 0.0234 0.013 0.0144
Golgi 0.0473 0.0082 0.018 0.0132 0.0399 0.0169 0.0264 0.0059 0.007 0.0127 0.0254 0.0049 0.021 0.007 0.008 0.0145 0.0047 0.005
Lipid Particles 0.0241 0.0038 0.0174 0.006 0.0526 0.0037 0.0099 0.0004 0.0022 0.031 0.0302 0.0008 0.0144 0.0007 0.0024 0.0163 0.0018 0.0015
Mitochondria 0.016 0.0016 0.0242 0.0233 0.03 0.0038 0.0295 0.0017 0.0189 0.0079 0.0064 0.0017 0.0124 0.0012 0.0025 0.0033 0.0009 0.0006
None 0.0311 0.0414 0.0381 0.0485 0.1214 0.0276 0.0364 0.0173 0.0104 0.028 0.0083 0.0163 0.0473 0.0511 0.0538 0.0554 0.0483 0.046
Nuclear Periphery 0.0075 0.0006 0.0025 0.0005 0.0019 0.0008 0.0039 0.0004 0.0006 0.0013 0.0069 0.0003 0.0085 0.0006 0.0007 0.0015 0.0008 0.0115
Nucleolus 0.0006 0.0003 0.0013 0.0001 0.0007 0.0002 0.0011 0.0003 0.0002 0.0003 0.0148 0.0001 0.0007 0.0003 0.0003 0.0006 0.0038 0.0002
Nucleus 0.0022 0.001 0.0017 0.0007 0.0009 0.0006 0.0043 0.0014 0.0009 0.0011 0.0182 0.001 0.0034 0.0014 0.0009 0.0018 0.0052 0.0004
Peroxisomes 0.0177 0.0024 0.0048 0.0037 0.0206 0.0023 0.0139 0.0008 0.0063 0.016 0.0219 0.0051 0.0209 0.0044 0.0141 0.0135 0.0034 0.012
Punctate Nuclear 0.0039 0.001 0.0012 0.0003 0.0019 0.0011 0.0038 0.0016 0.0015 0.0018 0.0192 0.0015 0.0042 0.0014 0.0018 0.0114 0.0151 0.0005
Vacuole 0.0075 0.0037 0.0099 0.0074 0.0074 0.0019 0.01 0.0043 0.0043 0.0066 0.0034 0.002 0.0063 0.005 0.0036 0.005 0.0024 0.0011
Vacuole Periphery 0.0015 0.0003 0.0021 0.0012 0.0024 0.0005 0.0029 0.0005 0.001 0.0016 0.0013 0.0005 0.0012 0.0005 0.0006 0.0008 0.0005 0.0005

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 22.3328 17.253 12.0709 18.4539 14.299 14.8803 18.9397 16.9879 19.4911 21.2838
Translational Efficiency 0.8882 0.9119 1.4604 0.8003 1.0146 1.3052 0.9662 1.2266 1.171 1.0175

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
741 1166 1427 1374 2002 1326 1350 1087 2743 2492 2777 2461

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 781.87 836.15 1019.77 1090.50 846.77 870.77 1125.47 1035.67 829.24 854.57 1071.15 1066.28
Standard Deviation 83.62 149.39 169.37 162.69 107.77 116.74 146.54 141.02 105.81 134.13 167.25 155.89
Intensity Change Log 2 — 0.096833 0.383243 0.479989 — 0.040322 0.410486 0.290522 — 0.067728 0.397471 0.384589

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.006727 0.002763 0.013337 0.088253 0.006535 0.005386 0.029857 0.022391 0.006587 0.004158 0.021368 0.059162
Bud Neck 0.059368 0.028377 0.024922 0.013085 0.066572 0.068368 0.028190 0.031353 0.064626 0.049657 0.026511 0.021154
Bud Site 0.241523* 0.228554* 0.372961* 0.316964* 0.233141* 0.272767* 0.321391* 0.324287* 0.235406* 0.252080* 0.347891* 0.320199*
Cell Periphery 0.002026 0.000286 0.000424 0.000551 0.001218 0.000556 0.000433 0.000361 0.001436 0.000430 0.000428 0.000467
Cytoplasm 0.428183* 0.436706* 0.385467* 0.396154* 0.436497* 0.405932* 0.245965* 0.252214* 0.434251* 0.420331* 0.317650* 0.332577*
Cytoplasmic Foci 0.156941 0.174528 0.084902 0.077548 0.157931 0.124596 0.142747 0.099191 0.157663 0.147959 0.113023 0.087107
Eisosomes 0.001775 0.000063 0.000093 0.000136 0.001281 0.000279 0.000161 0.000095 0.001415 0.000178 0.000126 0.000118
Endoplasmic Reticulum 0.003777 0.001494 0.002329 0.000477 0.002823 0.000997 0.003359 0.001004 0.003081 0.001229 0.002830 0.000710
Endosome 0.020238 0.029767 0.012993 0.011773 0.015753 0.025496 0.048423 0.045603 0.016965 0.027494 0.030217 0.026715
Golgi 0.023535 0.010684 0.003472 0.007424 0.022566 0.015337 0.008702 0.012915 0.022827 0.013160 0.006015 0.009849
Lipid Particles 0.004429 0.002652 0.002464 0.002323 0.003104 0.002311 0.007676 0.004406 0.003462 0.002470 0.004998 0.003243
Mitochondria 0.006140 0.002801 0.000362 0.000680 0.005676 0.003610 0.001046 0.001501 0.005801 0.003231 0.000695 0.001043
Mitotic Spindle 0.000307 0.004525 0.005450 0.012000 0.001196 0.004682 0.009080 0.024343 0.000956 0.004608 0.007215 0.017452
None 0.000566 0.002959 0.000257 0.000111 0.000616 0.000382 0.000257 0.000344 0.000602 0.001588 0.000257 0.000214
Nuclear Periphery 0.000067 0.000154 0.000139 0.000044 0.000019 0.000029 0.000227 0.000162 0.000032 0.000087 0.000182 0.000096
Nuclear Periphery Foci 0.000327 0.001431 0.002434 0.000448 0.000257 0.000238 0.002693 0.001458 0.000276 0.000796 0.002560 0.000894
Nucleolus 0.000180 0.001479 0.000161 0.000062 0.000138 0.000207 0.000240 0.000243 0.000149 0.000802 0.000199 0.000142
Nucleus 0.005174 0.008831 0.009476 0.002126 0.006344 0.003371 0.004806 0.003595 0.006028 0.005926 0.007206 0.002775
Peroxisomes 0.008616 0.013670 0.012486 0.033033 0.008735 0.012967 0.025396 0.052478 0.008703 0.013296 0.018762 0.041622
Vacuole 0.026810 0.044704 0.064930 0.035585 0.027168 0.049588 0.117497 0.120008 0.027071 0.047303 0.090485 0.072874
Vacuole Periphery 0.003291 0.003573 0.000941 0.001221 0.002430 0.002904 0.001852 0.002047 0.002663 0.003217 0.001384 0.001586

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin 3.37 -3.53 -12.84 -13.71 -11.62 1.04 -7.87 -5.03 -5.27 1.99 3.17 -8.67 -13.68 -14.37 -8.98
Bud Neck 5.75 6.99 9.43 6.58 6.74 -0.31 10.78 9.58 8.78 -0.63 4.19 13.40 15.32 11.46 3.50
Bud Site 1.18 -7.65 -3.45 -5.32 5.04 -3.86 -6.28 -5.21 -1.79 0.33 -1.90 -10.84 -6.71 -4.69 3.77
Cell Periphery 7.51 7.04 5.85 -1.61 -0.67 5.87 7.34 7.18 2.81 0.97 9.74 10.14 8.06 -0.07 -0.24
Cytoplasm -0.72 2.72 0.82 1.64 -2.06 2.93 18.02 15.39 11.22 -1.02 1.60 13.43 9.78 7.65 -2.90
Cytoplasmic Foci -2.07 10.14 11.22 14.09 1.68 5.65 2.57 9.74 3.93 6.55 1.98 10.03 16.18 13.10 6.43
Eisosomes 6.40 6.30 6.16 -5.80 -3.01 5.43 6.13 6.49 8.11 4.03 8.11 8.49 8.56 4.94 1.15
Endoplasmic Reticulum 2.62 1.37 3.84 3.70 3.27 3.09 -0.49 3.37 0.19 4.29 3.82 0.52 5.13 2.70 5.34
Endosome -3.36 3.61 4.62 7.92 1.40 -6.07 -10.98 -8.60 -4.96 1.10 -7.22 -7.50 -4.64 1.54 2.23
Golgi 7.27 12.24 9.41 3.82 -3.69 5.12 12.54 6.06 2.04 -1.91 9.32 19.42 12.24 4.18 -3.30
Lipid Particles 2.15 2.28 2.24 -0.13 -0.15 1.45 -5.09 -1.35 -1.97 2.69 2.35 -3.30 -0.05 -1.81 2.70
Mitochondria 2.87 6.50 6.20 2.78 -2.22 2.34 6.56 7.19 3.09 -0.77 3.71 9.87 10.04 4.32 -1.15
Mitotic Spindle -5.30 -6.08 -6.17 -3.57 -2.66 -3.13 -5.70 -7.40 -5.97 -4.05 -4.89 -7.51 -9.32 -6.83 -4.69
None -2.92 3.29 4.97 3.49 4.29 1.75 2.72 1.85 0.18 -0.74 -2.52 3.97 4.37 3.51 0.47
Nuclear Periphery -1.35 -1.34 0.32 1.72 1.73 -2.10 -3.70 -4.08 -3.75 0.98 -1.98 -3.87 -3.81 -0.46 2.02
Nuclear Periphery Foci -3.67 -8.35 -3.76 2.63 7.23 0.16 -6.72 -3.15 -3.16 2.41 -3.65 -10.55 -4.10 -0.95 5.99
Nucleolus -1.96 -0.06 1.21 2.15 2.87 -1.41 -2.00 -2.03 -0.44 0.47 -2.13 -1.79 -0.01 2.13 1.80
Nucleus -2.98 -4.87 1.38 5.78 8.35 6.11 1.63 3.50 -1.67 1.31 -0.13 -4.09 4.60 3.85 7.66
Peroxisomes -2.96 -2.43 -9.35 -6.48 -7.76 -2.96 -8.09 -9.26 -7.98 -5.24 -4.17 -7.92 -12.93 -10.30 -8.32
Vacuole -5.96 -12.42 -8.01 -2.59 4.66 -7.88 -18.94 -17.01 -12.88 -1.35 -10.03 -22.62 -18.34 -11.59 2.10
Vacuole Periphery -0.36 5.71 4.47 3.89 -0.49 -1.21 2.52 1.73 2.27 -0.34 -1.50 6.57 4.70 4.61 -0.44
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description GTPase-activating protein (RhoGAP) for Rho3p and Rho4p; possibly involved in control of actin cytoskeleton organization
Localization
Cell Percentages cytoplasm (81%)
Cell Cycle Regulation No
Subcompartmental Group cytoplasm-10

Rgd1

Rgd1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rgd1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available