Standard name | |
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Human Ortholog | |
Description | Protein involved in assembly of the RNA polymerase III (Pol III) complex; high copy suppressor of Pol III assembly mutation and psk1 psk2 mutations that confer temperature-sensitivity for galactose utilization; physically interacts with Pol III; proposed to bind single-stranded nucleic acids via its R3H domain |
ensLOC | DeepLoc | |||||||||||||||||||||||
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Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 2 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 2 | 1 | 2 | 4 | 0 | 1 | 1 | 1 | 4 | 2 | 1 | 0 | 0 | 0 | 2 | 9 |
Bud | 2 | 1 | 3 | 2 | 2 | 2 | 4 | 8 | 7 | 3 | 7 | 7 | 6 | 5 | 5 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 1 | 7 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 2 | 0 | 5 | 6 | 8 | 12 | 4 | 10 | 10 | 7 | 10 | 5 | 12 | 15 | 16 | 11 | 9 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 488 | 145 | 116 | 217 | 279 | 242 | 281 | 284 | 189 | 167 | 170 | 202 | 447 | 711 | 844 | 388 | 238 | 101 | 469 | 144 | 107 | 250 | 392 | 334 |
Endoplasmic Reticulum | 0 | 1 | 2 | 4 | 3 | 11 | 22 | 19 | 13 | 20 | 9 | 15 | 3 | 6 | 5 | 14 | 13 | 4 | 19 | 2 | 5 | 12 | 30 | 72 |
Endosome | 10 | 0 | 0 | 1 | 1 | 0 | 5 | 3 | 5 | 0 | 0 | 0 | 0 | 4 | 6 | 18 | 5 | 2 | 3 | 0 | 1 | 0 | 10 | 52 |
Golgi | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 1 | 2 | 0 | 3 | 0 | 1 | 0 | 0 | 0 | 1 | 8 | 22 |
Mitochondria | 14 | 1 | 2 | 8 | 12 | 82 | 99 | 135 | 149 | 176 | 199 | 258 | 0 | 1 | 1 | 15 | 10 | 4 | 2 | 1 | 2 | 1 | 4 | 19 |
Nucleus | 2 | 2 | 0 | 1 | 0 | 0 | 1 | 0 | 2 | 0 | 4 | 2 | 0 | 1 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 3 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 2 |
Nucleolus | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 2 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 1 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 2 | 2 | 2 | 1 | 0 | 0 | 0 | 3 | 16 |
Vac/Vac Membrane | 15 | 0 | 0 | 4 | 4 | 5 | 8 | 10 | 6 | 10 | 12 | 16 | 0 | 1 | 4 | 14 | 10 | 1 | 3 | 6 | 2 | 1 | 7 | 24 |
Unique Cell Count | 514 | 148 | 119 | 227 | 290 | 289 | 373 | 402 | 315 | 313 | 335 | 397 | 451 | 727 | 859 | 426 | 261 | 113 | 517 | 159 | 122 | 275 | 469 | 581 |
Labelled Cell Count | 535 | 152 | 124 | 243 | 308 | 353 | 433 | 463 | 386 | 390 | 413 | 517 | 463 | 744 | 885 | 472 | 295 | 129 | 517 | 159 | 122 | 275 | 469 | 581 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 8.2 | 7.7 | 7.5 | 7.9 | 7.6 | 6.5 | 6.1 | 6.2 | 5.9 | 5.4 | 5.6 | 5.4 | 9.3 | 8.9 | 8.8 | 7.7 | 8.6 | 10.0 | 8.6 | 8.5 | 9.4 |
Std Deviation (1e-4) | 0.9 | 1.1 | 1.0 | 1.0 | 1.3 | 1.0 | 0.9 | 1.2 | 1.1 | 1.1 | 1.2 | 1.0 | 1.2 | 1.1 | 1.0 | 1.0 | 1.3 | 1.4 | 1.2 | 1.4 | 1.4 |
Intensity Change (Log2) | – | – | – | 0.06 | 0.01 | -0.21 | -0.32 | -0.29 | -0.35 | -0.48 | -0.43 | -0.49 | 0.3 | 0.24 | 0.22 | 0.04 | 0.19 | 0.4 | 0.19 | 0.18 | 0.31 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | -0.9 | -0.6 | -3.8 | -5.3 | -6.1 | -7.6 | -8.6 | -9.1 | -9.2 | 1.4 | 0.2 | 0.6 | -2.3 | -2.3 | -2.5 |
Endoplasmic Reticulum | 0 | 0 | 0 | 1.9 | 0 | 0 | 2.0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 6.1 | 5.8 | 6.9 | 8.9 | 10.3 | 10.9 | 12.1 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.4908 | 4.9257 | 4.3481 | 3.5432 | 3.5871 | 4.5198 | 2.9397 | 4.6158 | 4.0849 | 3.5192 | 3.5119 | 4.1227 | 5.7172 | 7.319 | 6.372 | 6.4011 | 5.9392 | 6.6236 |
Actin | 0.0118 | 0.0012 | 0.006 | 0.0184 | 0.0014 | 0.0118 | 0.0301 | 0.0016 | 0.0235 | 0.0218 | 0 | 0.0105 | 0.0211 | 0.0004 | 0.0083 | 0.0034 | 0.014 | 0.0054 |
Bud | 0.0041 | 0.0035 | 0.0023 | 0.0025 | 0.0005 | 0.001 | 0.0008 | 0.0002 | 0.0012 | 0.0016 | 0 | 0.0002 | 0.0058 | 0.0094 | 0.0127 | 0.0048 | 0.0014 | 0.0033 |
Bud Neck | 0.0006 | 0.0003 | 0.0018 | 0.0022 | 0.0006 | 0.0016 | 0.0016 | 0.0001 | 0.0023 | 0.0026 | 0.0002 | 0.0007 | 0.0016 | 0.0002 | 0.0009 | 0.0003 | 0.0005 | 0.0007 |
Bud Periphery | 0.0033 | 0.0011 | 0.002 | 0.0009 | 0.0005 | 0.0007 | 0.0008 | 0.0001 | 0.0006 | 0.0036 | 0 | 0.0001 | 0.0016 | 0.0014 | 0.0043 | 0.0024 | 0.0008 | 0.0019 |
Bud Site | 0.0017 | 0.0133 | 0.007 | 0.0024 | 0.0013 | 0.0002 | 0.0344 | 0.0007 | 0.0029 | 0.0097 | 0 | 0.0001 | 0.0056 | 0.0033 | 0.0097 | 0.0022 | 0.0008 | 0.0002 |
Cell Periphery | 0.0015 | 0.001 | 0.0005 | 0.0003 | 0.0002 | 0.0001 | 0.0006 | 0.0002 | 0.0002 | 0.0018 | 0 | 0.0001 | 0.0007 | 0.0002 | 0.0007 | 0.0001 | 0.0002 | 0.0001 |
Cytoplasm | 0.8415 | 0.9378 | 0.8915 | 0.7824 | 0.81 | 0.8906 | 0.5606 | 0.9368 | 0.8225 | 0.785 | 0.9717 | 0.9219 | 0.82 | 0.9542 | 0.8804 | 0.9288 | 0.8413 | 0.9255 |
Cytoplasmic Foci | 0.0209 | 0.0085 | 0.0188 | 0.0444 | 0.019 | 0.0219 | 0.0882 | 0.0049 | 0.0537 | 0.0274 | 0.0058 | 0.0092 | 0.0235 | 0.0076 | 0.0176 | 0.0117 | 0.0231 | 0.0143 |
Eisosomes | 0.0001 | 0 | 0.0001 | 0.0004 | 0.0001 | 0 | 0.0003 | 0 | 0.0001 | 0.0005 | 0 | 0.0003 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0193 | 0.0079 | 0.0139 | 0.0128 | 0.0167 | 0.0216 | 0.0233 | 0.0043 | 0.0084 | 0.0061 | 0.0057 | 0.0106 | 0.0157 | 0.0007 | 0.0112 | 0.0057 | 0.0054 | 0.0063 |
Endosome | 0.0288 | 0.0131 | 0.0168 | 0.0472 | 0.0471 | 0.0252 | 0.0894 | 0.0056 | 0.0273 | 0.0583 | 0.0106 | 0.0136 | 0.033 | 0.0065 | 0.0139 | 0.0149 | 0.0138 | 0.0118 |
Golgi | 0.0056 | 0.0012 | 0.0029 | 0.025 | 0.0055 | 0.0011 | 0.0284 | 0.0015 | 0.0143 | 0.0186 | 0.0002 | 0.0017 | 0.0074 | 0.0005 | 0.0087 | 0.0012 | 0.0064 | 0.0028 |
Lipid Particles | 0.0048 | 0.0002 | 0.001 | 0.0215 | 0.0045 | 0.0003 | 0.0374 | 0.0001 | 0.005 | 0.003 | 0 | 0.0009 | 0.0022 | 0.0001 | 0.0007 | 0.0002 | 0.0075 | 0.0005 |
Mitochondria | 0.0045 | 0.0006 | 0.0024 | 0.0039 | 0.0219 | 0.0015 | 0.0063 | 0.0003 | 0.005 | 0.0329 | 0.0001 | 0.0013 | 0.0026 | 0.0017 | 0.0094 | 0.0006 | 0.0547 | 0.0012 |
None | 0.0316 | 0.0045 | 0.0202 | 0.0085 | 0.0267 | 0.0142 | 0.0438 | 0.0419 | 0.0093 | 0.0021 | 0.0028 | 0.0177 | 0.0375 | 0.0085 | 0.0067 | 0.0132 | 0.0126 | 0.0194 |
Nuclear Periphery | 0.0026 | 0.0009 | 0.0021 | 0.0034 | 0.0057 | 0.0014 | 0.0095 | 0.0004 | 0.0045 | 0.001 | 0.0006 | 0.0008 | 0.0061 | 0.0002 | 0.0012 | 0.0019 | 0.0035 | 0.0005 |
Nucleolus | 0.0008 | 0.0001 | 0.0003 | 0.0008 | 0.0043 | 0.0003 | 0.0006 | 0 | 0.0006 | 0.001 | 0 | 0.0001 | 0.0004 | 0.0016 | 0.0002 | 0.0001 | 0.0004 | 0.0001 |
Nucleus | 0.0033 | 0.0013 | 0.002 | 0.0049 | 0.0052 | 0.0016 | 0.0026 | 0.0004 | 0.0027 | 0.0017 | 0.0004 | 0.0006 | 0.005 | 0.0013 | 0.0049 | 0.0017 | 0.0014 | 0.0009 |
Peroxisomes | 0.0058 | 0.0001 | 0.0008 | 0.0047 | 0.0009 | 0.0003 | 0.0202 | 0 | 0.0031 | 0.001 | 0 | 0.0081 | 0.0016 | 0.0002 | 0.0054 | 0.0003 | 0.0058 | 0.0003 |
Punctate Nuclear | 0.0011 | 0.0003 | 0.0014 | 0.0066 | 0.0215 | 0.001 | 0.0147 | 0.0001 | 0.0104 | 0.0008 | 0 | 0.0004 | 0.0048 | 0.0012 | 0.0007 | 0.0044 | 0.0029 | 0.0038 |
Vacuole | 0.0052 | 0.0027 | 0.0056 | 0.0051 | 0.0044 | 0.0025 | 0.0043 | 0.0007 | 0.0015 | 0.0176 | 0.0015 | 0.0008 | 0.0028 | 0.0008 | 0.0019 | 0.0016 | 0.0024 | 0.0008 |
Vacuole Periphery | 0.0012 | 0.0005 | 0.0007 | 0.0017 | 0.0019 | 0.0011 | 0.002 | 0.0001 | 0.0009 | 0.0017 | 0.0003 | 0.0004 | 0.0009 | 0.0002 | 0.0005 | 0.0004 | 0.001 | 0.0003 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 22.0842 | 30.8691 | 26.1024 | 28.9674 | 34.3597 | 39.3282 | 28.4898 | 31.5987 | 30.0477 | 33.1311 |
Translational Efficiency | 1.4042 | 1.0443 | 0.943 | 0.9486 | 0.6683 | 0.8043 | 1.0558 | 0.8169 | 0.7487 | 0.9354 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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