Standard name
Human Ortholog
Description Ubiquitin-conjugating enzyme (E2); involved in postreplication repair as a heterodimer with Rad18p, regulation of K63 polyubiquitination in response to oxidative stress, DSBR and checkpoint control as a heterodimer with Bre1p, ubiquitin-mediated N-end rule protein degradation as a heterodimer with Ubr1p, ERAD with Ubr1p in the absence of canonical ER membrane ligases, and Rpn4p turnover as part of proteasome homeostasis, in complex with Ubr2p and Mub1p
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0.05 0 0.06 0.07 0.07 – 0.06 0 0.06 0.05 0 0.1 0.18 0 0 0.08 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0.05 – 0 0 0 0 0 0 0 0.1 0.12 0.08 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0.09 0 – 0.08 0.06 0.12 0.09 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0.84 0.91 0.91 0.92 0.79 0.71 0.76 – 0.75 0.71 0.64 0.66 0.9 0.81 0.67 0.66 0.63 0.51 0.88 0.91 0.89 0.85 0.77 0.66
Nuclear Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0.15 0.11 0 0 0 0.08 0 – 0.07 0.1 0.14 0.14 0.07 0 0.05 0 0 0 0.05 0 0 0.06 0.11 0.11
Peroxisomes 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0.05 0 0.05 0 0.14 0.15 0.15 – 0.12 0.14 0.14 0.16 0 0.07 0.11 0.24 0.27 0.37 0 0 0 0.05 0.08 0.18
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 – 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0
Bud 0 0 0 0 0 0 2 – 0 2 2 2 0 0 0 0 0 0 3 0 1 2 4 3
Bud Neck 0 0 0 0 0 0 0 – 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 1 0 – 1 2 6 4 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0
Cytoplasm 5 3 6 9 19 20 32 – 21 11 26 22 5 35 53 10 9 23 0 0 0 1 0 1
Endoplasmic Reticulum 0 0 0 0 0 0 0 – 0 0 1 0 0 0 0 5 6 6 0 0 0 0 0 0
Endosome 0 0 0 1 1 0 1 – 4 6 9 12 1 0 2 0 8 1 1 1 1 0 1 1
Golgi 0 0 1 0 8 0 22 – 1 9 1 0 0 4 2 24 29 21 1 0 0 0 1 2
Mitochondria 0 1 0 1 0 25 5 – 27 21 50 42 0 0 0 1 1 1 0 0 2 0 0 0
Nucleus 152 81 119 231 253 199 362 – 248 237 274 313 214 271 201 160 155 141 177 97 122 145 265 193
Nuclear Periphery 0 0 0 1 1 1 1 – 4 0 1 2 0 0 0 1 0 0 0 0 0 0 1 0
Nucleolus 27 10 4 5 5 23 13 – 23 32 58 65 16 8 14 6 3 9 9 3 4 9 37 31
Peroxisomes 0 0 0 0 0 0 0 – 0 1 0 0 0 0 3 1 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 1 0 1 3 – 1 0 0 1 0 0 2 0 2 0 0 0 0 0 1 3
Vac/Vac Membrane 10 4 6 9 44 41 72 – 41 46 61 76 10 23 33 59 65 103 3 2 3 7 27 52
Unique Cell Count 182 89 131 251 322 280 477 331 336 427 476 239 335 299 243 245 275 201 107 137 171 343 291
Labelled Cell Count 194 99 136 258 331 311 513 371 367 489 540 246 341 311 267 278 306 201 107 137 171 343 291


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 15.2 17.5 13.8 14.5 17.1 10.0 14.6 – 12.3 12.7 11.4 11.7 19.3 18.6 19.2 28.3 26.8 26.5 14.2 15.7 15.5
Std Deviation (1e-4) 6.2 8.3 5.2 5.4 6.1 4.4 6.4 – 5.4 5.2 4.9 5.0 6.7 7.5 7.8 8.9 8.7 8.9 6.2 7.0 7.5
Intensity Change (Log2) – – – 0.08 0.32 -0.46 0.09 – -0.16 -0.12 -0.27 -0.24 0.49 0.43 0.48 1.04 0.96 0.95 0.04 0.19 0.17


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Cytoplasm -0.5 0.6 1.0 0.9 – 0.7 0 0.6 0 0 2.0 3.6 -0.2 -0.4 1.4
Endoplasmic Reticulum 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 – 0 0 0 0 0 0 0 3.4 3.8 2.9
Mitochondria 0 0 3.5 0 – 3.4 2.9 4.1 3.5 0 0 0 0 0 0
Nucleus 0.4 -3.1 -4.5 -3.7 – -3.8 -4.6 -5.9 -5.6 -0.4 -2.6 -5.2 -5.3 -5.7 -7.8
Nuclear Periphery 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 2.0 0 – 1.6 2.4 3.4 3.4 1.5 0 0.8 0 0 0
Peroxisomes 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0
Vacuole -0.5 2.8 3.0 3.2 – 2.5 2.8 3.0 3.4 -0.2 0.9 2.1 4.8 5.2 7.0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 3.5907 4.0182 2.9824 2.8019 2.4393 2.9634 5.3508 6.0434 5.105 4.4721 5.0087 5.2993 6.3035 7.6322 6.4081 6.6508 6.1973 6.2411
Actin 0.0339 0 0.0065 0 0.0495 0.001 0.0388 0.0007 0.0133 0.0066 0.0072 0.0023 0.0028 0.0025 0.0108 0.0115 0 0.0004
Bud 0.0009 0 0.0001 0 0.0006 0 0.0015 0.0001 0.001 0.0001 0.0008 0.0001 0.0007 0.0001 0.0003 0.0003 0 0.0002
Bud Neck 0.0067 0 0.0004 0 0.0011 0.0004 0.0052 0.0003 0.0022 0.0003 0.0004 0.0007 0.0018 0.0001 0.0004 0.0001 0.0001 0.0006
Bud Periphery 0.0023 0 0.0002 0 0.0007 0.0001 0.0037 0.0001 0.0029 0.0001 0.0015 0.0002 0.0023 0.0001 0.0008 0.0005 0 0.0003
Bud Site 0.0049 0 0.0003 0 0.0101 0.0001 0.0083 0.0012 0.0108 0.0003 0.0048 0.0002 0.0025 0.001 0.0058 0.0003 0 0.0005
Cell Periphery 0.0014 0 0.0001 0 0.0001 0 0.0019 0 0.0004 0 0.0003 0.0001 0.0013 0.0001 0.0003 0 0 0.0001
Cytoplasm 0.0069 0 0.0006 0 0.0003 0.0006 0.0028 0.0008 0.0022 0.0018 0.0011 0.0003 0.0043 0.007 0.0033 0 0 0.0004
Cytoplasmic Foci 0.01 0 0.0017 0 0.0146 0.0011 0.021 0.0021 0.0078 0.0116 0.007 0.0006 0.0155 0.005 0.0127 0.0015 0 0.0006
Eisosomes 0.0009 0 0.0001 0 0.0002 0 0.0008 0 0.0001 0 0.0002 0 0.0001 0 0.0002 0.0001 0 0
Endoplasmic Reticulum 0.0053 0 0.0008 0 0.0008 0.0008 0.0045 0.0001 0.003 0.0016 0.0046 0.001 0.0033 0.0003 0.0008 0 0 0.0002
Endosome 0.0211 0 0.0095 0 0.0095 0.0054 0.0256 0.0028 0.0098 0.0087 0.042 0.0041 0.0107 0.0013 0.002 0.0015 0 0.0031
Golgi 0.0063 0 0.0044 0 0.0142 0.0018 0.0141 0.0015 0.0037 0.0025 0.0184 0.003 0.0038 0.0018 0.0012 0.003 0 0.0004
Lipid Particles 0.0141 0 0.0039 0 0.0127 0.0017 0.0278 0.0018 0.0082 0.01 0.0291 0.0044 0.0109 0.0003 0.0025 0.0008 0 0.0008
Mitochondria 0.0078 0 0.0057 0 0.003 0.0021 0.0398 0.0005 0.007 0.0006 0.0908 0.0021 0.0134 0.0004 0.0087 0.047 0.0001 0.0076
None 0.0039 0 0.0009 0 0.0003 0.0007 0.006 0.0002 0.0008 0.0016 0.0015 0.0001 0.0013 0 0.0073 0.0001 0 0.0001
Nuclear Periphery 0.0269 0.0009 0.0091 0.0003 0.0009 0.0144 0.0268 0.0021 0.0027 0.0049 0.0199 0.0044 0.0404 0.0015 0.007 0.0001 0.0004 0.001
Nucleolus 0.0118 0.0039 0.0051 0.0024 0.0296 0.0161 0.0113 0.0055 0.0075 0.0049 0.0119 0.011 0.0259 0.0038 0.0036 0.0014 0.0258 0.0129
Nucleus 0.8067 0.9947 0.946 0.9972 0.8414 0.9512 0.7343 0.9759 0.9 0.9272 0.7416 0.9631 0.8236 0.9616 0.9249 0.9216 0.9731 0.9526
Peroxisomes 0.0076 0 0.0007 0 0.0069 0.0002 0.0101 0.0005 0.0082 0.0015 0.004 0.0002 0.0098 0.0051 0.0027 0.0101 0 0.0005
Punctate Nuclear 0.0136 0.0003 0.0018 0 0.002 0.0014 0.0062 0.0035 0.0033 0.0153 0.0028 0.001 0.0161 0.0009 0.0035 0.0001 0.0002 0.0112
Vacuole 0.0044 0 0.0011 0 0.0011 0.0003 0.0057 0.0002 0.0036 0.0002 0.0056 0.0005 0.006 0.0063 0.0008 0.0001 0 0.0053
Vacuole Periphery 0.0027 0 0.0009 0 0.0003 0.0006 0.0041 0.0001 0.0017 0.0002 0.0043 0.0005 0.0036 0.0008 0.0004 0.0001 0 0.0012

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 70.1587 87.4245 63.4625 58.9248 79.9379 80.744 58.1292 75.2241 72.4397 69.1743
Translational Efficiency 1.7682 1.6159 1.8831 2.5707 1.5853 1.6079 2.3315 2.0777 1.8194 1.8027

Hit Data

Dataset Hit
Protein Concentration ✔
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1292 233 249 83 1187 689 1798 999 2479 922 2047 1082

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 812.26 974.10 1256.13 2090.25 802.43 944.11 1339.06 1919.66 807.55 951.69 1328.97 1932.75
Standard Deviation 110.88 135.11 162.59 445.02 108.76 137.40 214.04 403.00 109.98 137.44 210.22 408.91
Intensity Change Log 2 — 0.262128 0.628972 1.363662 — 0.234579 0.738773 1.258403 — 0.248503 0.684583 1.312313

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000275 0.000706 0.001040 0.000761 0.000258 0.000512 0.000541 0.001499 0.000267 0.000561 0.000602 0.001443
Bud Neck 0.003783 0.014069 0.013970 0.014355 0.003276 0.007717 0.019574 0.035345 0.003540 0.009323 0.018892 0.033734
Bud Site 0.001357 0.004157 0.001556 0.005792 0.001068 0.002916 0.001137 0.012897 0.001218 0.003229 0.001188 0.012352
Cell Periphery 0.000126 0.000184 0.000090 0.000315 0.000055 0.000096 0.000071 0.000242 0.000092 0.000118 0.000073 0.000248
Cytoplasm 0.001767 0.004833 0.000977 0.009722 0.002443 0.004407 0.001382 0.016641 0.002090 0.004514 0.001333 0.016110
Cytoplasmic Foci 0.000407 0.007290 0.000056 0.001548 0.000215 0.002888 0.000019 0.003856 0.000315 0.004000 0.000023 0.003679
Eisosomes 0.000021 0.000025 0.000049 0.000046 0.000014 0.000022 0.000035 0.000034 0.000017 0.000023 0.000037 0.000035
Endoplasmic Reticulum 0.004268 0.006263 0.003856 0.000921 0.003785 0.005970 0.001573 0.001097 0.004037 0.006044 0.001851 0.001084
Endosome 0.000362 0.006201 0.000114 0.011058 0.000183 0.003412 0.000070 0.006714 0.000276 0.004117 0.000075 0.007047
Golgi 0.000230 0.005741 0.000068 0.003296 0.000149 0.003616 0.000048 0.013039 0.000191 0.004153 0.000050 0.012292
Lipid Particles 0.000442 0.000866 0.000081 0.000079 0.000151 0.000674 0.000017 0.000701 0.000302 0.000723 0.000024 0.000653
Mitochondria 0.002292 0.003283 0.001281 0.001862 0.001212 0.007844 0.001257 0.003724 0.001775 0.006691 0.001260 0.003581
Mitotic Spindle 0.001866 0.009194 0.000159 0.001917 0.002508 0.005604 0.000782 0.052815 0.002174 0.006511 0.000706 0.048910
None 0.003061 0.006172 0.001171 0.004425 0.002339 0.001687 0.000949 0.006086 0.002715 0.002821 0.000976 0.005959
Nuclear Periphery 0.000314 0.000339 0.000243 0.000498 0.000273 0.001753 0.000183 0.001456 0.000294 0.001396 0.000190 0.001383
Nuclear Periphery Foci 0.000236 0.002494 0.000068 0.000091 0.000232 0.000847 0.000045 0.001432 0.000234 0.001263 0.000048 0.001329
Nucleolus 0.005867 0.003455 0.003128 0.000838 0.004697 0.004625 0.003012 0.001893 0.005307 0.004330 0.003026 0.001812
Nucleus 0.971645* 0.915046* 0.970328* 0.907376* 0.975995* 0.938974* 0.968533* 0.827302* 0.973728* 0.932927* 0.968751* 0.833445*
Peroxisomes 0.000489 0.000796 0.000317 0.000362 0.000457 0.001588 0.000109 0.000389 0.000473 0.001388 0.000135 0.000387
Vacuole 0.000728 0.005535 0.001348 0.026791 0.000515 0.002797 0.000539 0.008781 0.000626 0.003489 0.000637 0.010163
Vacuole Periphery 0.000465 0.003350 0.000098 0.007945 0.000175 0.002051 0.000124 0.004055 0.000326 0.002379 0.000121 0.004353

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -2.76 -8.66 -4.56 -1.98 -0.14 -3.24 -8.06 -3.47 -2.04 -1.85 -4.14 -10.45 -3.81 -2.07 -1.72
Bud Neck -2.84 -8.31 -5.57 -1.53 -1.78 -3.19 -16.47 -14.96 -10.97 -5.23 -4.21 -17.92 -15.57 -10.38 -5.60
Bud Site -2.28 -0.85 -3.18 -0.80 -3.03 -1.80 -0.37 -5.50 -3.29 -5.91 -2.53 -0.35 -5.88 -3.31 -6.17
Cell Periphery -0.78 1.12 -3.71 -1.94 -4.38 -2.43 -1.77 -8.69 -5.23 -7.89 -1.04 1.40 -6.50 -4.11 -8.68
Cytoplasm -1.83 1.67 -2.93 -1.35 -3.32 -1.42 1.71 -6.29 -4.11 -7.18 -2.19 1.77 -6.97 -4.43 -7.55
Cytoplasmic Foci -2.37 1.46 -0.59 2.29 -1.94 -3.07 2.74 -3.09 1.82 -4.22 -3.74 2.46 -2.76 2.78 -4.36
Eisosomes -1.04 -8.12 -4.93 -3.99 -1.20 -3.52 -14.43 -12.13 -6.51 -2.02 -2.60 -13.55 -11.41 -7.29 -1.99
Endoplasmic Reticulum -2.08 0.43 8.82 5.08 6.49 -4.21 11.12 12.51 9.52 3.08 -4.39 12.17 15.73 10.84 5.81
Endosome -2.62 2.10 -0.90 0.99 -0.99 -3.24 2.79 -3.42 1.25 -3.65 -4.11 3.29 -3.34 1.91 -3.75
Golgi -2.56 1.16 -0.90 2.09 -1.12 -2.74 0.92 -2.45 -0.04 -2.53 -3.63 1.63 -2.46 0.38 -2.58
Lipid Particles -0.74 1.62 1.39 1.43 -1.06 -1.61 3.57 -1.17 1.11 -2.51 -1.39 2.43 0.15 1.50 -2.51
Mitochondria -0.64 1.09 -0.91 0.08 -3.77 -2.76 -0.43 -3.63 2.03 -5.90 -2.65 0.76 -2.45 2.02 -6.43
Mitotic Spindle -1.37 2.17 -1.12 0.59 -1.89 -1.43 1.32 -6.29 -5.45 -6.75 -2.06 1.83 -6.44 -5.20 -6.83
None -1.12 2.89 -2.06 -0.11 -3.31 1.18 2.95 -5.52 -6.97 -8.76 -0.13 4.48 -5.56 -4.09 -9.22
Nuclear Periphery -0.24 -0.23 -3.20 -3.09 -3.16 -1.15 0.73 -6.67 0.09 -7.41 -1.14 1.14 -7.09 -0.21 -7.69
Nuclear Periphery Foci -1.16 1.98 1.73 1.23 -0.51 -1.52 1.95 -1.59 0.79 -3.20 -1.79 3.05 -1.65 1.33 -3.20
Nucleolus 2.00 0.38 5.47 2.02 2.71 0.03 1.63 3.68 1.69 3.53 0.83 2.75 5.98 2.00 4.25
Nucleus 3.78 1.54 3.20 -0.41 2.79 4.79 3.93 12.97 6.06 11.81 5.93 3.92 13.28 5.59 12.12
Peroxisomes -0.75 0.70 1.54 1.82 2.23 -1.43 1.14 0.89 1.96 -1.66 -1.58 1.89 1.60 2.22 -1.07
Vacuole -2.94 -3.43 -1.87 -1.00 -1.72 -3.62 -0.22 -6.45 -3.65 -6.43 -4.57 -0.40 -6.62 -3.52 -6.59
Vacuole Periphery -1.45 1.73 -0.80 0.48 -1.00 -2.11 0.72 -2.47 0.85 -2.63 -2.45 1.77 -2.22 1.18 -2.82
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Ubiquitin-conjugating enzyme (E2); involved in postreplication repair as a heterodimer with Rad18p, regulation of K63 polyubiquitination in response to oxidative stress, DSBR and checkpoint control as a heterodimer with Bre1p, ubiquitin-mediated N-end rule protein degradation as a heterodimer with Ubr1p, ERAD with Ubr1p in the absence of canonical ER membrane ligases, and Rpn4p turnover as part of proteasome homeostasis, in complex with Ubr2p and Mub1p
Localization
Cell Percentages nucleus (100%)
Cell Cycle Regulation No
Subcompartmental Group nucleus-4

Rad6

Rad6


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rad6-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available