Standard name
Human Ortholog
Description RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 – 0 0 0 0 0.06 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0 0 0 0.05 0.07 0 – 0 0 0 0 0 0 0.1 0.13 0.13 0.13 0.07 0 0 0 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0.05 – 0 0.06 0 0.07 0.1 0 0 0 0 0.1 0 0 0 0 0 0 0
Nucleus 0.81 0.69 0.74 0.76 0.7 0.68 – 0.68 0.68 0.71 0.66 0.64 0.7 0.68 0.63 0.65 0.6 0.64 0.78 0.65 0.63 0.54 0.53 0.52
Nuclear Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0.5 0.69 0.61 0.47 0.43 0.55 – 0.5 0.64 0.51 0.62 0.57 0.6 0.47 0.35 0.32 0.34 0.35 0.17 0.3 0.29 0.35 0.34 0.33
Peroxisomes 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0.05 0.06
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
Bud 1 0 0 0 0 1 – 1 0 5 1 2 1 0 0 0 0 0 3 1 4 1 5 3
Bud Neck 2 0 1 0 1 1 – 3 1 5 1 3 0 0 1 0 0 0 1 0 0 0 0 0
Bud Site 0 0 13 2 1 3 – 9 13 13 17 26 0 0 1 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 3 4 11 14 18 13 – 9 11 15 12 11 6 19 26 15 12 9 0 2 1 0 0 0
Endoplasmic Reticulum 0 0 0 0 0 0 – 0 0 0 0 0 1 0 0 1 1 3 0 0 0 0 1 0
Endosome 4 0 0 0 0 0 – 1 0 0 0 0 2 1 4 2 2 2 5 0 2 3 3 5
Golgi 0 0 0 0 0 0 – 0 0 0 0 0 1 0 1 0 0 0 0 0 0 3 3 5
Mitochondria 7 0 15 11 2 15 – 15 23 15 29 42 1 0 2 3 9 4 3 0 3 0 0 0
Nucleus 510 99 281 229 186 204 – 279 265 237 269 265 138 133 122 74 54 84 519 106 252 117 138 147
Nuclear Periphery 0 1 1 1 2 2 – 2 5 4 0 5 0 0 0 1 1 1 0 0 0 0 1 1
Nucleolus 311 100 233 142 114 165 – 206 250 170 254 238 118 92 67 36 31 46 111 49 118 76 88 94
Peroxisomes 2 0 1 1 0 0 – 2 0 1 0 0 1 3 3 0 0 0 0 0 0 0 0 0
SpindlePole 1 0 0 0 0 1 – 2 0 2 0 0 2 4 6 2 0 0 3 0 2 2 2 3
Vac/Vac Membrane 1 0 0 2 0 0 – 2 0 2 1 1 3 3 3 1 3 6 13 1 12 9 12 18
Unique Cell Count 627 144 380 301 265 301 409 390 336 410 415 197 196 193 113 90 131 665 163 403 218 262 283
Labelled Cell Count 842 204 556 402 324 405 531 568 469 584 593 274 255 236 135 113 155 665 163 403 218 262 283


Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 15.3 20.8 11.0 14.9 13.2 10.8 – 11.0 9.8 10.3 9.4 9.3 18.2 17.9 15.8 19.1 17.8 18.5 16.8 17.1 18.6
Std Deviation (1e-4) 4.4 7.3 4.3 8.2 6.3 4.5 – 4.3 4.1 4.5 4.4 3.5 6.5 8.0 7.2 10.1 7.3 8.7 5.1 5.9 9.2
Intensity Change (Log2) – – – 0.44 0.27 -0.02 – 0.0 -0.16 -0.09 -0.22 -0.24 0.73 0.71 0.53 0.8 0.7 0.75 0.62 0.64 0.76


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Bud Site -2.4 -2.6 -2.1 – -1.0 -0.1 0.3 0.5 1.9 0 0 0 0 0 0
Cell Periphery 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 1.2 2.4 1.0 – -0.6 -0.1 1.1 0 -0.2 0.1 3.5 4.9 4.3 0 2.0
Endoplasmic Reticulum 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Mitochondria -0.2 -2.5 0.7 – -0.2 1.2 0.3 1.9 3.4 -2.4 -2.8 -1.9 0 0 0
Nucleus 0.6 -1.1 -1.8 – -1.8 -1.8 -1.0 -2.5 -3.1 -1.0 -1.5 -2.7 -1.8 -2.6 -2.1
Nuclear Periphery 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Nucleolus -3.7 -4.6 -1.7 – -3.1 0.8 -2.9 0.2 -1.1 -0.3 -3.3 -6.0 -5.5 -4.6 -5.2
Peroxisomes 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 – 0 0 0 0 0 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration -0.8931 -0.4118 -0.629 -0.7769 -0.9796 -0.6513 -1.5845 -1.2148 -1.3854 -1.432 -0.7107 -1.1054 -0.3562 -0.0404 -0.0267 -0.0849 0.7084 -0.0259
Actin 0.0008 0.0001 0.0006 0.0002 0 0.0001 0.009 0.0046 0.0072 0.0001 0.0521 0.0026 0 0.0001 0.0001 0 0 0
Bud 0.0002 0.0018 0.0012 0.0001 0 0.0026 0.0015 0.0043 0.0007 0 0.0018 0.0006 0 0 0.0048 0 0 0
Bud Neck 0.0002 0.0015 0.0003 0.0004 0.0001 0.0002 0.0027 0.0004 0.0003 0 0.0134 0.0022 0 0.0001 0.0008 0 0 0.0001
Bud Periphery 0.0002 0.0011 0.0013 0.0001 0 0.0026 0.0051 0.0043 0.0007 0.0001 0.0039 0.0012 0 0 0.0048 0 0 0
Bud Site 0.0034 0.017 0.0118 0.0005 0 0.0003 0.0055 0.0117 0.0067 0.0001 0.0107 0.0005 0 0.0004 0.004 0 0 0
Cell Periphery 0.0001 0.0002 0.0002 0 0 0.0001 0.0005 0.0005 0.0001 0 0.0011 0.0001 0 0.0001 0.0001 0 0 0
Cytoplasm 0.0171 0.0231 0.0136 0.0158 0.0078 0.0203 0.0238 0.028 0.0137 0.0124 0.0108 0.0264 0.0066 0.0259 0.0112 0.0065 0.01 0.0175
Cytoplasmic Foci 0.0055 0.0094 0.0039 0.0036 0.0068 0.0066 0.0124 0.0064 0.0137 0.0038 0.0104 0.0057 0.0006 0.0016 0.0089 0.0009 0.0012 0.0017
Eisosomes 0.0002 0.0001 0.0002 0.0003 0.0001 0.0001 0.0004 0.0003 0.0003 0.0001 0.0011 0.0001 0.0002 0.0002 0.0001 0.0001 0 0
Endoplasmic Reticulum 0.0003 0.0003 0.0002 0.0002 0.0001 0.0001 0.0017 0.0005 0.0003 0.0002 0.002 0.0007 0.0002 0.0003 0.0002 0.0002 0.0002 0.0001
Endosome 0.0013 0.0016 0.0002 0.0005 0.0001 0.0003 0.0039 0.0003 0.0003 0.0002 0.0114 0.0021 0.0001 0.0001 0.0013 0.0001 0.0001 0.0001
Golgi 0.0004 0.0002 0.0001 0 0 0 0.0011 0.0001 0.0001 0 0.0048 0.001 0 0 0.0002 0 0 0
Lipid Particles 0.0013 0.0005 0.0002 0.0001 0.0002 0.0001 0.0037 0.0004 0.0005 0.0002 0.0081 0.0028 0.0001 0.0002 0.0003 0.0001 0.0003 0.0001
Mitochondria 0.0005 0.0002 0.0002 0.0001 0.0001 0.0001 0.001 0.0009 0.0005 0.0002 0.0024 0.0021 0 0.0001 0.0003 0.0001 0.0001 0
None 0.9657 0.9336 0.9561 0.9739 0.978 0.9624 0.9144 0.9219 0.9483 0.9797 0.8002 0.9343 0.9921 0.97 0.9593 0.9915 0.9878 0.9756
Nuclear Periphery 0.0003 0.0002 0.0004 0.0002 0.0002 0.0002 0.0022 0.0011 0.0003 0.0001 0.0099 0.0016 0 0.0001 0.0001 0.0001 0 0.0001
Nucleolus 0.0003 0.0005 0.0008 0.0006 0.0004 0.0002 0.0008 0.0012 0.0005 0.0004 0.0066 0.0007 0 0.0001 0.0009 0 0 0.0003
Nucleus 0.0005 0.0012 0.0022 0.0007 0.0008 0.0013 0.0015 0.0054 0.0009 0.0004 0.0063 0.0025 0 0.0002 0.0005 0.0001 0 0.0008
Peroxisomes 0.0007 0.0003 0.0002 0.0001 0.0002 0.001 0.0047 0.0008 0.002 0.0001 0.0047 0.0077 0 0.0001 0.0006 0 0 0
Punctate Nuclear 0.001 0.0067 0.0059 0.0024 0.0052 0.0011 0.003 0.0064 0.0026 0.0014 0.0319 0.0042 0.0001 0.0003 0.0005 0.0001 0 0.0033
Vacuole 0.0002 0.0002 0.0003 0.0002 0.0001 0.0002 0.0009 0.0005 0.0002 0.0002 0.0054 0.0005 0.0001 0.0001 0.001 0.0001 0.0001 0.0001
Vacuole Periphery 0 0 0 0 0 0 0.0002 0.0001 0 0 0.001 0.0002 0 0 0 0 0 0

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 32.8928 42.7697 33.7205 38.8197 42.647 32.8746 46.6229 36.4838 37.6124 41.016
Translational Efficiency 3.7075 2.9467 3.2037 2.5188 2.5497 2.996 2.2344 2.504 2.1408 2.5486

Hit Data

Dataset Hit
Protein Concentration ✔
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1426 172 1772 712 1510 2015 205 1478 2936 2187 1977 2190

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 598.98 683.03 733.12 738.17 583.42 685.67 733.46 771.35 590.98 685.46 733.16 760.56
Standard Deviation 65.41 92.12 104.78 96.46 71.25 84.82 87.10 116.65 68.91 85.42 103.09 111.58
Intensity Change Log 2 — 0.189441 0.291542 0.301445 — 0.232980 0.330183 0.402851 — 0.211088 0.310738 0.352372

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000087 0.000289 0.000112 0.000397 0.000078 0.000458 0.000491 0.001129 0.000082 0.000445 0.000152 0.000891
Bud Neck 0.023346 0.056698 0.002555 0.006595 0.016304 0.072309 0.001593 0.010295 0.019724 0.071081 0.002455 0.009092
Bud Site 0.002994 0.014682 0.007196 0.010209 0.002335 0.017980 0.004204 0.033150 0.002655 0.017720 0.006885 0.025691
Cell Periphery 0.000130 0.000246 0.000123 0.000203 0.000148 0.000275 0.000212 0.000176 0.000139 0.000273 0.000132 0.000185
Cytoplasm 0.429400* 0.192173* 0.345556* 0.459856* 0.418648* 0.296692* 0.294026* 0.465392* 0.423870* 0.288472* 0.340213* 0.463592*
Cytoplasmic Foci 0.301534* 0.387702* 0.011900 0.034107 0.262607* 0.298319* 0.021766 0.025656 0.281514* 0.305349* 0.012923 0.028403
Eisosomes 0.000236 0.000302 0.000028 0.000066 0.000244 0.000247 0.000090 0.000049 0.000240 0.000252 0.000035 0.000055
Endoplasmic Reticulum 0.000573 0.000718 0.001113 0.002451 0.000533 0.000667 0.003250 0.001293 0.000552 0.000671 0.001335 0.001670
Endosome 0.013177 0.055665 0.001347 0.004045 0.009645 0.040360 0.002485 0.009110 0.011361 0.041563 0.001465 0.007463
Golgi 0.002971 0.007915 0.000105 0.004802 0.001671 0.011693 0.000074 0.008240 0.002302 0.011396 0.000102 0.007123
Lipid Particles 0.014561 0.021529 0.000922 0.001988 0.020678 0.016068 0.003021 0.001337 0.017707 0.016498 0.001140 0.001549
Mitochondria 0.005533 0.023315 0.001053 0.000915 0.007805 0.039506 0.000336 0.007741 0.006701 0.038233 0.000978 0.005522
Mitotic Spindle 0.000104 0.000983 0.001974 0.015207 0.000374 0.010058 0.000217 0.057313 0.000243 0.009344 0.001792 0.043624
None 0.002916 0.001664 0.007341 0.006129 0.002825 0.003043 0.006436 0.006150 0.002869 0.002935 0.007247 0.006143
Nuclear Periphery 0.000437 0.000396 0.001143 0.001367 0.000947 0.000546 0.001271 0.001381 0.000699 0.000535 0.001157 0.001376
Nuclear Periphery Foci 0.000204 0.000318 0.000256 0.001594 0.000242 0.000268 0.001078 0.000605 0.000224 0.000272 0.000341 0.000926
Nucleolus 0.001312 0.002039 0.000505 0.000438 0.001807 0.002008 0.000925 0.000636 0.001567 0.002010 0.000549 0.000572
Nucleus 0.150246* 0.095187 0.595289* 0.322029* 0.200817* 0.080046 0.598472* 0.282427* 0.176255* 0.081237 0.595619* 0.295302*
Peroxisomes 0.008087 0.047142 0.000290 0.000835 0.010247 0.028469 0.000554 0.000858 0.009198 0.029938 0.000317 0.000850
Vacuole 0.040998 0.087303 0.020966 0.126356 0.041227 0.076583 0.059292 0.084643 0.041116 0.077426 0.024940 0.098204
Vacuole Periphery 0.001157 0.003736 0.000224 0.000412 0.000816 0.004403 0.000205 0.002418 0.000981 0.004351 0.000222 0.001766

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -3.34 -1.25 -4.36 -0.89 -3.62 -4.95 -1.77 -2.85 -0.86 0.03 -5.13 -2.29 -3.49 -0.71 -2.67
Bud Neck -3.65 11.93 8.47 5.67 -3.09 -17.51 11.46 5.03 20.53 -6.65 -17.14 15.71 9.40 21.75 -6.32
Bud Site -3.19 -2.68 -4.22 1.17 -1.63 -12.35 -0.89 -8.02 -1.08 -6.24 -13.07 -3.06 -8.91 0.28 -5.59
Cell Periphery -2.53 1.02 -2.38 1.32 -2.70 -4.19 -1.91 1.37 4.83 2.32 -4.89 0.70 -0.77 4.48 -1.25
Cytoplasm 15.29 11.01 5.32 -9.81 -3.23 13.46 8.58 3.34 -9.12 -6.59 18.28 13.38 5.95 -10.69 -6.89
Cytoplasmic Foci -4.32 47.58 42.65 19.91 -6.58 -4.52 38.74 42.67 52.93 0.83 -3.46 63.82 61.07 55.75 -6.59
Eisosomes -2.37 22.60 15.62 7.98 -11.94 -0.19 7.64 15.15 18.06 3.21 -0.89 25.55 22.29 18.69 -9.89
Endoplasmic Reticulum -0.70 -9.01 -13.34 -8.00 -8.94 -1.13 -7.39 -11.13 -11.47 4.59 -1.34 -11.72 -17.56 -15.71 -5.17
Endosome -5.83 13.88 10.93 7.28 -4.32 -17.73 9.58 4.96 20.28 -2.86 -18.09 17.72 9.77 22.49 -5.50
Golgi -2.47 8.24 0.67 2.48 -1.68 -9.99 6.99 -1.63 5.86 -3.25 -9.70 10.66 -0.81 6.92 -3.64
Lipid Particles -1.52 14.64 13.27 4.61 -5.88 2.33 9.94 11.22 14.29 4.20 0.95 16.56 16.19 14.82 -3.24
Mitochondria -2.97 5.47 6.18 3.86 0.75 -12.10 5.95 2.56 14.47 -3.99 -13.73 7.26 4.03 15.73 -2.92
Mitotic Spindle -3.59 -3.20 -4.60 -4.28 -3.75 -6.90 1.35 -9.00 -5.87 -9.05 -7.05 -2.97 -10.04 -5.85 -9.12
None 1.23 -5.05 -1.17 -1.87 2.07 -0.35 -2.76 -2.76 -1.91 0.59 -0.17 -6.02 -2.85 -2.03 2.70
Nuclear Periphery 0.18 -13.95 -11.05 -10.83 -4.73 1.89 -3.13 -7.21 -14.41 -6.43 1.20 -6.89 -13.18 -15.43 -9.95
Nuclear Periphery Foci -1.89 -3.80 -6.93 -5.98 -6.36 -0.46 -6.32 -7.38 -6.61 3.91 -1.28 -6.06 -9.67 -8.65 -6.71
Nucleolus -1.65 4.65 3.33 4.34 -0.41 -0.52 3.51 4.54 7.99 1.86 -1.57 6.30 5.89 8.29 -0.24
Nucleus 4.46 -54.99 -17.25 -16.14 22.40 21.21 -20.19 -15.87 -33.46 12.62 22.36 -57.14 -24.20 -39.83 30.05
Peroxisomes -5.75 10.16 9.68 6.96 -2.25 -10.25 9.29 9.48 20.06 0.50 -13.30 13.65 13.36 21.14 -2.14
Vacuole -5.01 4.77 -19.08 -9.24 -20.26 -10.63 -4.83 -21.10 -14.56 -6.84 -12.56 2.39 -28.37 -19.36 -28.37
Vacuole Periphery -2.58 4.77 4.42 3.60 -0.64 -7.71 6.19 -1.12 6.38 -3.77 -7.65 6.87 0.78 7.68 -3.68
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description RNA polymerase II subunit B12.6; contacts DNA; mutations affect transcription start site selection and fidelity of transcription
Localization
Cell Percentages —
Cell Cycle Regulation No
Subcompartmental Group N/A

Rpb9

Rpb9


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rpb9-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available