Standard name | |
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Human Ortholog | |
Description | Spliceosome-associated protein that is required for pre-mRNA splicing; necessary for Prp2p function at the first catalytic step of splicing; has similarity to S. pombe Cwf22p; CWC22 is an essential protein |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 1 | 0 | 1 | 5 | 1 | 0 | 2 | 3 | 3 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 3 | 1 | 1 | 2 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 2 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 1 | 1 | 2 | 3 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 0 | 2 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 5 | 9 | 3 | 16 | 10 | 21 | 33 | 35 | 12 | 21 | 18 | 16 | 14 | 30 | 38 | 47 | 56 | 63 | 0 | 1 | 1 | 0 | 2 | 0 |
Endoplasmic Reticulum | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 1 | 1 | 0 | 0 | 3 | 1 | 20 | 13 | 17 | 0 | 0 | 1 | 0 | 0 | 0 |
Endosome | 0 | 1 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 3 | 0 | 0 | 0 | 0 | 2 | 5 | 7 | 7 | 2 | 3 | 0 | 0 | 0 | 4 |
Golgi | 0 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 1 | 0 | 0 | 1 | 0 |
Mitochondria | 23 | 6 | 0 | 3 | 6 | 33 | 63 | 41 | 45 | 33 | 154 | 52 | 0 | 1 | 2 | 28 | 18 | 21 | 2 | 2 | 1 | 1 | 4 | 4 |
Nucleus | 216 | 344 | 192 | 176 | 194 | 248 | 312 | 258 | 134 | 164 | 206 | 170 | 95 | 132 | 182 | 608 | 493 | 529 | 202 | 345 | 182 | 74 | 110 | 93 |
Nuclear Periphery | 2 | 2 | 0 | 0 | 1 | 3 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 4 | 1 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 2 | 0 | 0 | 0 | 1 | 2 | 4 | 2 | 7 | 4 | 8 | 3 | 2 | 0 | 0 | 4 | 1 | 2 | 4 | 1 | 0 | 2 | 2 | 9 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 3 | 0 | 0 | 2 | 2 | 1 | 1 | 4 | 0 | 2 | 1 | 1 | 1 | 5 | 6 | 6 | 0 | 1 | 1 | 1 | 1 | 2 |
Vac/Vac Membrane | 0 | 9 | 1 | 1 | 3 | 12 | 12 | 5 | 2 | 7 | 3 | 13 | 0 | 4 | 4 | 36 | 36 | 41 | 13 | 13 | 14 | 6 | 23 | 34 |
Unique Cell Count | 228 | 364 | 197 | 191 | 210 | 296 | 393 | 313 | 165 | 212 | 282 | 207 | 109 | 167 | 222 | 699 | 592 | 638 | 230 | 377 | 206 | 94 | 153 | 157 |
Labelled Cell Count | 248 | 372 | 200 | 198 | 217 | 328 | 442 | 350 | 203 | 243 | 398 | 263 | 113 | 171 | 231 | 755 | 634 | 693 | 230 | 377 | 206 | 94 | 153 | 157 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.1 | 6.8 | 6.2 | 6.2 | 6.4 | 5.3 | 5.5 | 5.7 | 4.9 | 5.4 | 4.7 | 5.1 | 6.6 | 7.2 | 6.8 | 7.2 | 7.3 | 6.7 | 5.3 | 6.6 | 6.8 |
Std Deviation (1e-4) | 0.8 | 1.0 | 0.7 | 1.5 | 1.4 | 1.3 | 1.7 | 1.4 | 1.2 | 1.7 | 1.2 | 1.4 | 1.5 | 2.0 | 1.8 | 1.3 | 1.4 | 1.4 | 1.1 | 1.8 | 1.6 |
Intensity Change (Log2) | – | – | – | -0.0 | 0.05 | -0.23 | -0.17 | -0.11 | -0.34 | -0.21 | -0.41 | -0.28 | 0.1 | 0.22 | 0.14 | 0.22 | 0.25 | 0.12 | -0.23 | 0.1 | 0.13 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 3.1 | 1.9 | 2.8 | 3.3 | 4.0 | 2.7 | 3.6 | 2.6 | 2.9 | 4.1 | 5.4 | 5.4 | 2.8 | 3.7 | 3.8 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 4.9 | 5.9 | 5.3 | 7.8 | 5.8 | 0 | 7.5 | 0 | 0 | 0 | 2.9 | 0 | 0 |
Nucleus | -2.4 | -2.3 | -4.8 | -5.9 | -5.1 | -5.1 | -6.0 | -7.0 | -5.0 | -3.6 | -5.6 | -5.1 | -4.2 | -5.1 | -5.2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 2.4 | 0 | 0 | 0 | 0 | 0 | 3.2 | 0 | 0 | 0 | 2.9 | 3.2 | 3.3 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.1889 | 2.0569 | 2.2944 | 3.7781 | 3.1346 | 3.4952 | 1.3225 | 1.3589 | 1.5462 | 0.5351 | 2.3882 | 1.0805 | 1.6495 | 1.6865 | 1.4919 | 1.572 | 1.1657 | 1.4285 |
Actin | 0.0146 | 0.0008 | 0.0079 | 0.0184 | 0.0079 | 0.0028 | 0.0261 | 0 | 0.0082 | 0 | 0.0605 | 0.0008 | 0.0129 | 0 | 0.0018 | 0.0294 | 0 | 0.0005 |
Bud | 0.0041 | 0.0062 | 0.0024 | 0.0004 | 0.0006 | 0.0002 | 0.0003 | 0 | 0.0004 | 0 | 0.0016 | 0.0006 | 0.0004 | 0 | 0.0003 | 0.0005 | 0 | 0 |
Bud Neck | 0.0016 | 0.0002 | 0.0008 | 0.0003 | 0.0033 | 0.0012 | 0.0009 | 0.0001 | 0.0006 | 0 | 0.0046 | 0.0008 | 0.002 | 0 | 0.0009 | 0.0002 | 0.0001 | 0.0005 |
Bud Periphery | 0.0031 | 0.0017 | 0.0034 | 0.0005 | 0.0013 | 0.0011 | 0.0008 | 0 | 0.0008 | 0 | 0.0034 | 0.0006 | 0.0009 | 0 | 0.0009 | 0.0006 | 0 | 0.0001 |
Bud Site | 0.0071 | 0.002 | 0.0128 | 0.0007 | 0.0014 | 0.0004 | 0.0025 | 0 | 0.0013 | 0 | 0.0045 | 0.0007 | 0.0022 | 0.0001 | 0.0026 | 0.0014 | 0 | 0 |
Cell Periphery | 0.001 | 0.0005 | 0.0003 | 0.0003 | 0.0002 | 0.0003 | 0.0003 | 0 | 0.0001 | 0 | 0.0006 | 0 | 0.0003 | 0 | 0.0002 | 0 | 0 | 0 |
Cytoplasm | 0.0068 | 0.0006 | 0.018 | 0.0114 | 0.003 | 0.0001 | 0.013 | 0.0006 | 0.0046 | 0 | 0.0014 | 0.0013 | 0.0078 | 0.0002 | 0.0003 | 0.0006 | 0.0003 | 0.0004 |
Cytoplasmic Foci | 0.0632 | 0.0044 | 0.0213 | 0.0045 | 0.0453 | 0.0075 | 0.0087 | 0 | 0.001 | 0 | 0.013 | 0.0023 | 0.0124 | 0 | 0.0038 | 0.0042 | 0 | 0.0002 |
Eisosomes | 0.0007 | 0 | 0.0002 | 0.0001 | 0.0002 | 0.0003 | 0.0006 | 0 | 0.0001 | 0 | 0.0009 | 0 | 0.0001 | 0 | 0.0001 | 0.0001 | 0 | 0 |
Endoplasmic Reticulum | 0.0079 | 0 | 0.004 | 0.005 | 0.002 | 0.0005 | 0.0044 | 0.0001 | 0.0014 | 0 | 0.0098 | 0.0005 | 0.0035 | 0 | 0.0005 | 0.0003 | 0 | 0.0001 |
Endosome | 0.0373 | 0.0004 | 0.0171 | 0.0094 | 0.0492 | 0.0009 | 0.0234 | 0.0008 | 0.0111 | 0 | 0.0706 | 0.0037 | 0.016 | 0 | 0.012 | 0.0031 | 0.0001 | 0.0014 |
Golgi | 0.0082 | 0.0005 | 0.0048 | 0.0015 | 0.0148 | 0.0003 | 0.0055 | 0 | 0.0016 | 0 | 0.0443 | 0.0007 | 0.0034 | 0 | 0.0042 | 0.003 | 0 | 0.0004 |
Lipid Particles | 0.0333 | 0.0045 | 0.0087 | 0.0019 | 0.0076 | 0.0026 | 0.0178 | 0 | 0.0013 | 0 | 0.1008 | 0.0004 | 0.0065 | 0 | 0.0128 | 0.0017 | 0 | 0.0007 |
Mitochondria | 0.0204 | 0.0068 | 0.0279 | 0.0657 | 0.052 | 0.0247 | 0.0223 | 0.0001 | 0.0019 | 0 | 0.0304 | 0.0008 | 0.0123 | 0.0001 | 0.0083 | 0.0014 | 0.0003 | 0.0006 |
None | 0.0224 | 0.0002 | 0.0026 | 0.0013 | 0.0015 | 0.0002 | 0.006 | 0.0003 | 0.0077 | 0 | 0.003 | 0.0004 | 0.002 | 0 | 0.0003 | 0.0003 | 0.0004 | 0.0036 |
Nuclear Periphery | 0.0428 | 0.0039 | 0.0166 | 0.0151 | 0.0114 | 0.0061 | 0.0122 | 0.0049 | 0.0116 | 0.0001 | 0.044 | 0.0097 | 0.0138 | 0.0016 | 0.0039 | 0.002 | 0.0092 | 0.0032 |
Nucleolus | 0.0077 | 0.0114 | 0.0128 | 0.0059 | 0.0204 | 0.0367 | 0.0067 | 0.0053 | 0.0102 | 0.0052 | 0.0097 | 0.0103 | 0.0099 | 0.0054 | 0.0083 | 0.0029 | 0.0084 | 0.0142 |
Nucleus | 0.6786 | 0.9399 | 0.8294 | 0.7809 | 0.7126 | 0.9084 | 0.8336 | 0.9865 | 0.9251 | 0.9945 | 0.5503 | 0.9625 | 0.8666 | 0.9586 | 0.9271 | 0.94 | 0.9799 | 0.9569 |
Peroxisomes | 0.0136 | 0.0053 | 0.0031 | 0.0047 | 0.0092 | 0.0027 | 0.0063 | 0 | 0.0004 | 0 | 0.0268 | 0.0011 | 0.0019 | 0 | 0.0027 | 0.006 | 0 | 0.0001 |
Punctate Nuclear | 0.0116 | 0.0049 | 0.0023 | 0.0684 | 0.0519 | 0.0007 | 0.0036 | 0.0006 | 0.0038 | 0.0001 | 0.0099 | 0.0018 | 0.019 | 0.0338 | 0.0053 | 0.0024 | 0.0009 | 0.0167 |
Vacuole | 0.0098 | 0.0028 | 0.0021 | 0.0014 | 0.0026 | 0.0012 | 0.0028 | 0.0003 | 0.0053 | 0 | 0.0043 | 0.0007 | 0.003 | 0.0001 | 0.0027 | 0.0001 | 0.0001 | 0.0001 |
Vacuole Periphery | 0.0042 | 0.0032 | 0.0016 | 0.0021 | 0.0016 | 0.0012 | 0.0024 | 0.0002 | 0.0015 | 0 | 0.0055 | 0.0003 | 0.003 | 0 | 0.0011 | 0.0001 | 0.0002 | 0.0002 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 8.9087 | 5.6884 | 7.1758 | 9.5758 | 9.0754 | 7.6318 | 9.4901 | 9.8989 | 10.5369 | 10.3522 |
Translational Efficiency | 0.8806 | 0.9686 | 0.9865 | 0.7318 | 0.8276 | 1.215 | 0.9665 | 0.7643 | 0.6852 | 0.8088 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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