Standard name | |
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Human Ortholog | |
Description | AAA-peroxin; heterodimerizes with AAA-peroxin Pex6p and participates in the recycling of peroxisomal signal receptor Pex5p from the peroxisomal membrane to the cystosol; induced by oleic acid and upregulated during anaerobiosis; mutations in human PEX1 can lead to severe peroxisomal disorders and early death |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 35 | 18 | 15 | 32 | 28 | 19 | 18 | 38 | 12 | – | 12 | 12 | 21 | 56 | 61 | 17 | 5 | 25 | 9 | 31 | 8 | 12 | 50 | 64 |
Bud | 9 | 11 | 18 | 35 | 85 | 75 | 62 | 74 | 48 | – | 41 | 40 | 13 | 34 | 51 | 31 | 22 | 38 | 1 | 3 | 2 | 3 | 3 | 1 |
Bud Neck | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 6 | 2 | 0 | 3 | 3 | 2 | 5 | 3 |
Bud Site | 4 | 2 | 8 | 14 | 10 | 22 | 39 | 22 | 17 | – | 21 | 11 | 4 | 3 | 11 | 24 | 11 | 31 | – | – | – | – | – | – |
Cell Periphery | 1 | 5 | 1 | 2 | 1 | 1 | 5 | 5 | 2 | – | 1 | 2 | 1 | 8 | 4 | 2 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 1 | 6 | 2 | 9 | 12 | 13 | 26 | 29 | 11 | – | 13 | 9 | 5 | 14 | 25 | 21 | 15 | 30 | 0 | 1 | 1 | 1 | 1 | 0 |
Endoplasmic Reticulum | 1 | 2 | 3 | 6 | 3 | 5 | 6 | 16 | 9 | – | 7 | 10 | 0 | 1 | 9 | 4 | 3 | 8 | 0 | 0 | 0 | 0 | 0 | 1 |
Endosome | 25 | 9 | 0 | 5 | 35 | 27 | 30 | 56 | 6 | – | 2 | 1 | 13 | 62 | 85 | 93 | 65 | 111 | 12 | 22 | 25 | 23 | 39 | 31 |
Golgi | 20 | 10 | 2 | 0 | 0 | 0 | 2 | 1 | 0 | – | 0 | 1 | 17 | 10 | 11 | 22 | 19 | 36 | 7 | 12 | 5 | 4 | 3 | 13 |
Mitochondria | 91 | 124 | 110 | 199 | 164 | 276 | 328 | 346 | 288 | – | 276 | 372 | 66 | 38 | 126 | 48 | 35 | 62 | 3 | 12 | 3 | 6 | 8 | 13 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 2 | 2 | 1 | 1 | – | 2 | 4 | 0 | 0 | 1 | 3 | 3 | 8 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 5 | 6 | 0 | 1 | 1 | 5 | 12 | 3 | 3 | – | 10 | 6 | 3 | 1 | 0 | 11 | 4 | 14 | 0 | 0 | 0 | 0 | 0 | 1 |
Nucleolus | 4 | 8 | 3 | 2 | 6 | 9 | 8 | 21 | 2 | – | 1 | 6 | 1 | 4 | 5 | 28 | 17 | 27 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 93 | 65 | 36 | 81 | 184 | 112 | 151 | 165 | 50 | – | 41 | 49 | 65 | 145 | 109 | 260 | 190 | 272 | 151 | 112 | 85 | 63 | 115 | 243 |
SpindlePole | 16 | 10 | 11 | 14 | 55 | 43 | 45 | 84 | 27 | – | 18 | 19 | 9 | 60 | 46 | 195 | 138 | 317 | 4 | 4 | 5 | 5 | 10 | 5 |
Vac/Vac Membrane | 1 | 5 | 0 | 0 | 2 | 0 | 2 | 4 | 0 | – | 0 | 4 | 1 | 2 | 4 | 10 | 6 | 10 | 0 | 1 | 1 | 0 | 2 | 0 |
Unique Cell Count | 175 | 181 | 131 | 243 | 345 | 396 | 507 | 605 | 344 | 331 | 419 | 133 | 268 | 349 | 514 | 350 | 708 | 192 | 207 | 145 | 126 | 245 | 383 | |
Labelled Cell Count | 306 | 281 | 209 | 401 | 587 | 610 | 736 | 865 | 476 | 445 | 546 | 219 | 438 | 548 | 769 | 539 | 993 | 192 | 207 | 145 | 126 | 245 | 383 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 7.6 | 6.6 | 4.9 | 4.8 | 5.3 | 4.9 | 4.7 | 4.7 | 4.2 | – | 4.1 | 3.8 | 6.6 | 6.9 | 6.0 | 7.2 | 8.0 | 8.2 | 6.9 | 6.3 | 7.0 |
Std Deviation (1e-4) | 1.1 | 0.9 | 0.7 | 1.0 | 1.2 | 1.2 | 1.1 | 1.1 | 0.9 | – | 0.8 | 0.8 | 1.0 | 1.1 | 1.0 | 1.5 | 1.9 | 1.8 | 1.7 | 1.3 | 1.2 |
Intensity Change (Log2) | – | – | – | -0.03 | 0.11 | 0.0 | -0.07 | -0.07 | -0.23 | – | -0.28 | -0.38 | 0.43 | 0.48 | 0.29 | 0.55 | 0.69 | 0.73 | 0.49 | 0.35 | 0.51 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Actin | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Bud | – | 2.6 | 1.4 | 0 | 0 | – | – | – | – | -1.0 | -0.3 | 0.2 | -3.0 | -2.6 | -3.5 |
Bud Neck | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | – | 0 | -0.2 | 0 | 0 | – | – | – | – | -1.2 | 0 | -1.5 | -0.7 | -1.5 | -0.9 |
Cell Periphery | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Cyto | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Endoplasmic Reticulum | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | – | 3.8 | 3.1 | 0 | 0 | – | – | – | – | 3.7 | 6.0 | 6.2 | 5.3 | 5.3 | 4.9 |
Golgi | – | 0 | 0 | 0 | 0 | – | – | – | – | 3.5 | 0 | 0 | 0 | 1.9 | 1.8 |
Mitochondria | – | -7.2 | -3.2 | 0 | 0 | – | – | – | – | -5.9 | -13.6 | -9.3 | -17.7 | -15.7 | -19.6 |
Nuclear Periphery | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Nuc | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Nucleolus | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 1.5 | 1.3 | 0 |
Peroxisomes | – | 5.1 | 0.2 | 0 | 0 | – | – | – | – | 3.6 | 5.0 | 0.8 | 4.7 | 5.2 | 2.4 |
SpindlePole | – | 2.1 | 0.8 | 0 | 0 | – | – | – | – | -0.5 | 3.4 | 1.4 | 6.5 | 6.6 | 7.8 |
Vac | – | – | – | – | – | – | – | – | – | – | – | – | – | – | – |
Cortical Patches | – | -1.1 | -2.7 | 0 | 0 | – | – | – | – | 1.0 | 2.3 | 1.6 | -3.8 | -4.9 | -3.9 |
Cytoplasm | – | 0 | 0 | 1.8 | 1.7 | – | – | – | – | 0 | 1.8 | 2.4 | 0 | 0 | 0 |
Nucleus | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | – | 0 | 0 | 0 | 0 | – | – | – | – | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 3.0664 | 3.0847 | 2.9866 | 2.629 | 3.087 | 3.0596 | 3.1247 | 3.3334 | 3.2646 | 3.41 | 3.3518 | 3.4529 | 1.1654 | 2.0608 | 1.6187 | 1.4319 | 0.9427 | 1.6088 |
Actin | 0.0639 | 0.0655 | 0.0957 | 0.0251 | 0.0548 | 0.0608 | 0.07 | 0.1013 | 0.1364 | 0.0466 | 0.0748 | 0.0833 | 0.066 | 0.0947 | 0.1017 | 0.0113 | 0.0193 | 0.0847 |
Bud | 0.0005 | 0.0003 | 0.0005 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0.0009 | 0.0009 | 0.0007 | 0.0013 | 0.0003 | 0.0002 | 0.0004 | 0.0005 | 0.0003 | 0.0001 | 0.0002 |
Bud Neck | 0.0058 | 0.0008 | 0.0024 | 0.0015 | 0.0052 | 0.0094 | 0.0017 | 0.0014 | 0.0024 | 0.0014 | 0.0033 | 0.001 | 0.0102 | 0.003 | 0.008 | 0.0667 | 0.0013 | 0.014 |
Bud Periphery | 0.0009 | 0.0003 | 0.0007 | 0.0001 | 0.0001 | 0.0002 | 0.0007 | 0.0008 | 0.0008 | 0.0008 | 0.001 | 0.0003 | 0.0003 | 0.0003 | 0.0006 | 0.0004 | 0 | 0.0002 |
Bud Site | 0.0089 | 0.0066 | 0.0051 | 0.0004 | 0.0038 | 0.0004 | 0.0047 | 0.0112 | 0.0067 | 0.0018 | 0.0088 | 0.0006 | 0.0116 | 0.0422 | 0.0191 | 0.0018 | 0.0002 | 0.001 |
Cell Periphery | 0.0006 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0 | 0.0005 | 0.0001 | 0.0001 | 0.0002 | 0 | 0 |
Cytoplasm | 0.0158 | 0.0042 | 0.0038 | 0.0005 | 0.0005 | 0.0004 | 0.0054 | 0.0141 | 0.0008 | 0.0007 | 0.0013 | 0.0005 | 0.0021 | 0.0056 | 0.001 | 0.0005 | 0.0004 | 0.0005 |
Cytoplasmic Foci | 0.1097 | 0.1788 | 0.1198 | 0.1686 | 0.0979 | 0.1119 | 0.1225 | 0.1863 | 0.1165 | 0.1244 | 0.1673 | 0.1075 | 0.1109 | 0.1498 | 0.1312 | 0.1516 | 0.1574 | 0.1304 |
Eisosomes | 0.0004 | 0.0001 | 0.0004 | 0 | 0.0004 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0005 | 0 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0027 | 0.0001 | 0.0014 | 0 | 0.0005 | 0.0005 | 0.001 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0003 | 0 | 0 | 0 |
Endosome | 0.0474 | 0.0347 | 0.0212 | 0.0129 | 0.0396 | 0.014 | 0.0563 | 0.0399 | 0.0252 | 0.0612 | 0.0739 | 0.0544 | 0.0123 | 0.0211 | 0.0171 | 0.0154 | 0.0096 | 0.0095 |
Golgi | 0.0364 | 0.0488 | 0.0217 | 0.0368 | 0.03 | 0.0224 | 0.0756 | 0.0622 | 0.0472 | 0.0968 | 0.0656 | 0.076 | 0.0223 | 0.0265 | 0.0268 | 0.0475 | 0.0123 | 0.014 |
Lipid Particles | 0.0868 | 0.0333 | 0.0284 | 0.033 | 0.0811 | 0.0475 | 0.1004 | 0.0132 | 0.0224 | 0.0139 | 0.0205 | 0.0648 | 0.0713 | 0.0418 | 0.0308 | 0.1121 | 0.0596 | 0.0509 |
Mitochondria | 0.0061 | 0.0081 | 0.0099 | 0.0023 | 0.0076 | 0.0046 | 0.0183 | 0.0099 | 0.025 | 0.0173 | 0.0055 | 0.0188 | 0.0043 | 0.0043 | 0.0172 | 0.0119 | 0.0009 | 0.0016 |
None | 0.0035 | 0.0004 | 0.0026 | 0.0004 | 0.0001 | 0.0032 | 0.0015 | 0.0002 | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0029 | 0.0016 | 0.0145 | 0.0001 | 0.0001 | 0.0002 |
Nuclear Periphery | 0.0008 | 0.0001 | 0.0022 | 0.0002 | 0.0001 | 0.0006 | 0.0086 | 0 | 0.0001 | 0 | 0.0001 | 0.0001 | 0.0001 | 0.0006 | 0.0033 | 0 | 0 | 0.0002 |
Nucleolus | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0 | 0.0001 | 0.0007 | 0.0001 | 0.0001 | 0.0001 | 0.0003 | 0.0001 | 0.0028 | 0.0002 | 0.0005 | 0.0001 | 0.0001 | 0.0001 |
Nucleus | 0.0003 | 0.0001 | 0.0005 | 0 | 0 | 0.0001 | 0.0053 | 0.0001 | 0.0001 | 0 | 0.0002 | 0 | 0.0002 | 0.0013 | 0.0004 | 0 | 0 | 0 |
Peroxisomes | 0.6044 | 0.6106 | 0.6788 | 0.7067 | 0.6766 | 0.7153 | 0.5071 | 0.5562 | 0.6127 | 0.6326 | 0.571 | 0.5901 | 0.6779 | 0.5822 | 0.6231 | 0.5792 | 0.7362 | 0.6888 |
Punctate Nuclear | 0.0022 | 0.0065 | 0.0039 | 0.011 | 0.0009 | 0.0081 | 0.0169 | 0.0015 | 0.0013 | 0.0008 | 0.0012 | 0.0011 | 0.003 | 0.0235 | 0.0025 | 0.0005 | 0.0023 | 0.0037 |
Vacuole | 0.0018 | 0.0004 | 0.0005 | 0.0001 | 0.0003 | 0.0001 | 0.0014 | 0.0004 | 0.0005 | 0.0003 | 0.003 | 0.0005 | 0.0005 | 0.0004 | 0.0004 | 0.0003 | 0.0001 | 0.0001 |
Vacuole Periphery | 0.0009 | 0.0002 | 0.0003 | 0 | 0.0003 | 0.0001 | 0.0009 | 0.0002 | 0.0003 | 0.0002 | 0.0005 | 0.0003 | 0.0001 | 0.0001 | 0.0005 | 0.0001 | 0 | 0.0001 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 9.6883 | 11.6526 | 10.2826 | 15.8255 | 10.7342 | 9.8589 | 14.807 | 14.3996 | 16.4352 | 15.0402 |
Translational Efficiency | 0.7514 | 0.5433 | 0.5979 | 0.5038 | 0.5259 | 0.7074 | 0.5889 | 0.5564 | 0.5054 | 0.4982 |
Dataset | Hit |
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Protein Concentration | ✔ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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