Standard name
Human Ortholog
Description Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0.07 0.07 0.06 0.11 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0.07 0.11 0.08 0.09 0.1 0.12 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.97 0.98 0.99 0.99 0.98 0.97 0.75 0.66 0.71 0.66 0.69 0.65 0.99 0.98 0.96 0.99 0.99 1.0 0.96 0.91 0.96 0.95 0.92 0.92
Endoplasmic Reticulum 0 0 0 0 0 0 0.2 0.2 0.16 0.23 0.17 0.17 0 0 0 0.05 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0.06 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 12 7 21 18 12 28 0 0 0 0 0 0 0 0 0 0 1 1
Bud 0 0 1 0 0 0 1 1 1 5 1 1 0 2 2 0 0 0 0 0 1 1 4 4
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 2 0 4 9 8 8 28 32 24 24 19 33 1 11 16 7 1 4 0 0 0 0 0 0
Cytoplasm 195 95 152 202 280 280 293 192 208 173 131 174 247 322 414 349 136 258 188 101 139 250 314 419
Endoplasmic Reticulum 2 1 0 4 7 5 78 57 48 59 32 46 4 1 9 18 6 7 2 1 1 6 10 13
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 1 4 6 17 15 1 9 0 1 1 0 0 1 0 0 0 0 0 1
Mitochondria 1 1 0 0 0 0 2 1 11 6 14 9 0 0 0 0 1 0 1 0 0 0 1 1
Nucleus 1 0 0 0 0 0 0 2 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vac/Vac Membrane 0 0 1 0 0 0 1 15 6 1 0 2 0 1 3 0 0 2 0 2 1 1 1 4
Unique Cell Count 200 97 154 205 287 288 392 290 291 262 190 266 250 327 431 352 137 259 197 112 145 262 341 455
Labelled Cell Count 201 97 158 215 295 294 419 313 336 301 211 302 252 339 445 374 144 272 197 112 145 262 341 455


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 78.8 101.5 92.3 88.5 68.7 68.7 41.8 37.6 32.7 31.3 27.6 28.2 105.9 101.5 92.9 164.2 152.6 164.9 102.3 100.0 104.9
Std Deviation (1e-4) 15.9 24.6 20.0 18.6 14.9 14.9 11.2 9.9 9.8 8.4 8.7 6.5 22.9 23.5 21.5 41.1 52.0 53.2 23.3 26.0 27.5
Intensity Change (Log2) – – – -0.06 -0.43 -0.43 -1.14 -1.3 -1.5 -1.56 -1.74 -1.71 0.2 0.14 0.01 0.83 0.73 0.84 0.15 0.12 0.19


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 3.4 3.3 3.2 4.2 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0.9 0 0 2.0 3.1 2.3 2.6 2.7 3.4 0 0 0.7 0 0 0
Cytoplasm -0.1 -0.8 -1.0 -6.5 -7.8 -6.9 -7.8 -7.2 -7.9 0.1 -0.2 -1.6 0.5 0.5 1.1
Endoplasmic Reticulum 0 0 0 6.0 5.9 5.3 6.4 5.3 5.5 0 0 0 2.9 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 3.1 3.0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 3.4 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 0 0 0 0 2.4 0 0 0 0 0 0 0 0 0 0

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 77.9259 113.8093 106.4869 85.8545 63.4818 104.6679 106.9876 131.3893 126.1451 120.9801 116.4413 126.9823 90.7897 137.0969 119.9924 103.6933 122.8609 121.9423
Actin 0.0014 0.0003 0.0203 0.0076 0.0021 0.0011 0.001 0.0003 0.0003 0.0001 0.0009 0.0005 0.048 0.0003 0.0103 0.0019 0.0004 0.0139
Bud 0.0014 0.0007 0.0009 0.0025 0.0038 0.0008 0.0007 0.0004 0.0004 0.001 0.0002 0.0007 0.002 0.0004 0.0014 0.0007 0.0018 0.0019
Bud Neck 0.0005 0.0004 0.0014 0.0225 0.0004 0.0012 0.0005 0.0004 0.0009 0.0006 0.0009 0.0012 0.0014 0.0003 0.0004 0.0006 0.0008 0.0015
Bud Periphery 0.0038 0.0004 0.0012 0.0072 0.0252 0.0005 0.0008 0.0002 0.0002 0.0003 0.0001 0.0001 0.0022 0.0002 0.0028 0.0003 0.0003 0.0017
Bud Site 0.0004 0.0008 0.0039 0.0086 0.0005 0.0001 0.0003 0.0003 0.0002 0.0002 0 0.0001 0.0034 0.0003 0.0018 0.0006 0.0001 0.0045
Cell Periphery 0.021 0.0136 0.0041 0.0156 0.006 0.001 0.0076 0.0039 0.0083 0.0086 0.0003 0.0005 0.0123 0.0131 0.0041 0.0007 0.0018 0.0005
Cytoplasm 0.687 0.9282 0.8563 0.6393 0.59 0.894 0.8057 0.9582 0.9078 0.7503 0.9308 0.876 0.6526 0.9473 0.8722 0.7293 0.8976 0.853
Cytoplasmic Foci 0.0055 0.0017 0.0138 0.0108 0.0445 0.0033 0.0021 0.0006 0.0011 0.0014 0.0023 0.0031 0.0318 0.0011 0.0057 0.0678 0.0022 0.008
Eisosomes 0.0001 0 0.0003 0.0002 0.0001 0 0.0002 0.0001 0 0 0 0 0.0012 0 0.0001 0.0004 0 0.0001
Endoplasmic Reticulum 0.071 0.0109 0.0253 0.0088 0.0408 0.0613 0.0323 0.0042 0.0092 0.0025 0.0072 0.0817 0.0229 0.0036 0.0085 0.0119 0.0007 0.0291
Endosome 0.0321 0.0018 0.02 0.0276 0.031 0.0098 0.0079 0.0008 0.0022 0.0068 0.0042 0.0062 0.0266 0.001 0.0062 0.0079 0.0064 0.0306
Golgi 0.0013 0.0002 0.0077 0.016 0.0031 0.0018 0.0011 0.0002 0.0002 0.0002 0.0003 0.0007 0.0095 0.0002 0.0016 0.0021 0.0004 0.0128
Lipid Particles 0.0027 0.0008 0.004 0.0053 0.0148 0.0001 0.0016 0.0005 0.0007 0.0006 0.0001 0.0006 0.0158 0.0021 0.0014 0.0432 0.0004 0.0015
Mitochondria 0.0023 0.0003 0.002 0.0324 0.0038 0.0027 0.005 0.0004 0.0001 0.0002 0.0001 0.0005 0.0128 0.0007 0.0057 0.0089 0.0004 0.012
None 0.007 0.0006 0.0006 0.0061 0.0217 0.0007 0.0109 0.0004 0.0002 0.0002 0.0001 0.0004 0.0085 0.0021 0.0039 0.0422 0.0003 0.0007
Nuclear Periphery 0.0374 0.0053 0.0038 0.0085 0.0263 0.0055 0.0234 0.0027 0.0067 0.0075 0.0175 0.013 0.0286 0.0036 0.0083 0.0081 0.0041 0.0055
Nucleolus 0.0019 0.0007 0.0002 0.0028 0.0021 0 0.005 0.0007 0.0001 0.0014 0 0.0001 0.0028 0.0003 0.0043 0.0022 0.0002 0.0001
Nucleus 0.0109 0.0022 0.002 0.0032 0.0067 0.003 0.0101 0.0019 0.0028 0.007 0.0039 0.0029 0.0133 0.0018 0.0031 0.0035 0.0042 0.0029
Peroxisomes 0.0003 0 0.0036 0.0018 0.0019 0.0001 0.0001 0 0 0 0 0 0.0111 0 0.0005 0.0029 0.0001 0.0008
Punctate Nuclear 0.0032 0.0001 0.0008 0.0003 0.0046 0.0001 0.0034 0 0 0 0.0001 0.0002 0.0078 0.0001 0.0004 0.0053 0.0001 0.0002
Vacuole 0.094 0.0272 0.0244 0.1294 0.128 0.0096 0.0581 0.0222 0.053 0.1756 0.0258 0.0097 0.0638 0.02 0.0481 0.0457 0.0624 0.0116
Vacuole Periphery 0.0148 0.0037 0.0033 0.0436 0.0426 0.0032 0.022 0.0015 0.0055 0.0353 0.0052 0.0022 0.0216 0.0016 0.0093 0.0137 0.0154 0.007

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 2617.827 2839.1194 3298.5811 2466.7135 3081.7769 2780.8779 2422.2505 2129.8842 2526.3253 2045.5608
Translational Efficiency 1.6322 1.6485 1.4668 1.971 1.8193 1.5306 1.4728 1.9047 1.3449 1.7354

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1712 269 2938 715 1806 2050 1458 221 3518 2319 4396 936

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 5472.98 7552.85 10028.71 8889.99 5259.33 6541.20 8729.40 7063.46 5363.30 6658.55 9597.77 8458.73
Standard Deviation 1087.34 1381.31 1810.40 2717.70 1247.98 1425.07 1795.80 2092.66 1177.41 1456.54 1906.38 2697.73
Intensity Change Log 2 — 0.464695 0.873738 0.699855 — 0.314676 0.731003 0.425496 — 0.393126 0.805554 0.571908

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000021 0.000075 0.000054 0.000614 0.000038 0.000051 0.000098 0.000172 0.000030 0.000054 0.000068 0.000509
Bud Neck 0.000112 0.000846 0.000223 0.003250 0.000202 0.000310 0.001687 0.003573 0.000158 0.000372 0.000709 0.003327
Bud Site 0.001372 0.003959 0.001993 0.009554 0.001946 0.001724 0.004882 0.009075 0.001667 0.001983 0.002951 0.009441
Cell Periphery 0.007467 0.015205 0.015285 0.029708 0.007829 0.004126 0.007584 0.015613 0.007653 0.005411 0.012731 0.026380
Cytoplasm 0.835699* 0.588621* 0.798957* 0.559673* 0.781515* 0.825951* 0.710988* 0.388511* 0.807883* 0.798421* 0.769781* 0.519260*
Cytoplasmic Foci 0.007112 0.015379 0.002591 0.006606 0.008727 0.007584 0.006333 0.007269 0.007941 0.008488 0.003832 0.006763
Eisosomes 0.000000 0.000001 0.000001 0.000009 0.000001 0.000001 0.000002 0.000005 0.000001 0.000001 0.000001 0.000008
Endoplasmic Reticulum 0.000668 0.000223 0.000605 0.000203 0.000929 0.000335 0.000217 0.000122 0.000802 0.000322 0.000477 0.000184
Endosome 0.000402 0.000603 0.000238 0.002475 0.000504 0.000408 0.000490 0.001466 0.000454 0.000431 0.000321 0.002237
Golgi 0.041605 0.091342 0.009010 0.009372 0.049384 0.039527 0.015078 0.011047 0.045598 0.045537 0.011022 0.009768
Lipid Particles 0.007044 0.013271 0.009440 0.016199 0.007756 0.005024 0.008824 0.015793 0.007410 0.005981 0.009236 0.016104
Mitochondria 0.000099 0.000084 0.000229 0.000798 0.000187 0.000328 0.000836 0.007721 0.000144 0.000300 0.000430 0.002433
Mitotic Spindle 0.000534 0.001312 0.000181 0.002431 0.000991 0.001072 0.000648 0.002446 0.000769 0.001100 0.000336 0.002435
None 0.001499 0.001646 0.001163 0.002629 0.001728 0.002727 0.001392 0.001845 0.001616 0.002602 0.001239 0.002444
Nuclear Periphery 0.000356 0.001316 0.000202 0.000554 0.000505 0.000411 0.000671 0.000705 0.000433 0.000516 0.000357 0.000590
Nuclear Periphery Foci 0.010946 0.019472 0.003174 0.004661 0.012507 0.010287 0.008192 0.005813 0.011747 0.011352 0.004839 0.004933
Nucleolus 0.000030 0.000085 0.000072 0.000418 0.000076 0.000220 0.000172 0.000502 0.000053 0.000204 0.000105 0.000438
Nucleus 0.003689 0.007227 0.003677 0.023273 0.004847 0.007482 0.027102 0.021190 0.004283 0.007452 0.011446 0.022781
Peroxisomes 0.000016 0.000010 0.000077 0.000253 0.000017 0.000076 0.000032 0.000080 0.000016 0.000068 0.000062 0.000212
Vacuole 0.035550 0.107749 0.127055 0.305939* 0.049978 0.045020 0.177500 0.480904* 0.042957 0.052296 0.143786 0.347250*
Vacuole Periphery 0.045779 0.131572* 0.025775 0.021381 0.070335 0.047336 0.027271 0.026147 0.058385 0.057108 0.026271 0.022506

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -2.00 -4.95 -2.50 -2.19 -2.31 -1.93 -6.31 -3.14 -2.72 -1.38 -3.42 -7.20 -2.68 -2.49 -2.36
Bud Neck -5.11 -3.47 -7.55 -5.61 -7.05 -2.43 -11.83 -6.80 -6.55 -3.56 -4.60 -11.24 -9.64 -8.87 -7.35
Bud Site -1.40 -2.90 -5.30 -1.83 -4.71 0.54 -4.50 -3.97 -4.06 -1.88 -1.33 -5.00 -6.27 -5.79 -4.75
Cell Periphery -3.80 -7.77 -10.04 -4.04 -5.55 6.32 0.67 -2.35 -4.56 -2.62 4.17 -7.24 -10.31 -11.89 -6.60
Cytoplasm 11.11 5.41 20.67 1.35 18.07 -4.73 9.79 16.47 18.53 11.70 1.67 8.32 24.51 22.39 20.16
Cytoplasmic Foci -3.61 7.82 -0.07 3.36 -4.18 1.13 1.38 -0.33 -0.75 -0.92 -1.32 7.37 0.22 1.02 -3.49
Eisosomes -4.97 -6.26 -6.41 -5.57 -5.89 -1.12 -5.77 -3.81 -3.47 -2.45 -1.87 -7.75 -7.23 -6.48 -6.22
Endoplasmic Reticulum 5.27 0.67 5.67 0.98 6.41 4.80 6.13 6.99 5.05 3.33 5.97 4.09 8.48 3.69 6.64
Endosome -2.71 4.51 -2.12 -1.79 -2.34 1.93 -0.61 -1.90 -2.14 -1.80 0.24 3.92 -2.33 -2.34 -2.54
Golgi -7.76 16.24 15.13 13.52 0.87 3.74 16.49 16.96 14.47 3.71 0.06 23.94 22.75 19.77 2.75
Lipid Particles -3.62 -3.11 -6.67 -0.96 -4.83 3.47 -1.76 -3.95 -5.29 -3.10 1.97 -3.49 -7.75 -8.86 -5.76
Mitochondria 1.04 -4.67 -4.13 -4.21 -3.26 -1.42 -0.95 -1.42 -1.37 -1.23 -1.77 -1.35 -2.07 -1.82 -1.68
Mitotic Spindle -4.13 6.85 -1.64 -0.77 -1.98 -0.45 1.18 -1.16 -1.13 -1.23 -2.25 3.49 -1.82 -1.50 -2.17
None -0.90 0.87 -1.48 -1.25 -1.73 -2.39 1.75 -0.08 1.54 -0.76 -2.71 1.48 -1.33 0.52 -1.87
Nuclear Periphery -5.83 4.76 -4.22 4.26 -7.14 1.64 -3.54 -1.36 -1.84 0.18 -2.48 0.99 -3.30 -1.51 -3.84
Nuclear Periphery Foci -3.85 11.36 7.55 6.64 -2.75 2.11 4.21 6.23 4.77 2.85 0.29 12.12 10.25 8.83 0.08
Nucleolus -6.68 -14.15 -4.70 -3.97 -4.16 -1.33 -3.71 -4.81 -1.62 -3.36 -1.56 -4.02 -5.66 -1.57 -4.78
Nucleus -3.36 -1.13 -11.15 -8.65 -10.91 -3.99 -14.99 -5.15 -4.54 0.87 -5.92 -13.18 -11.95 -10.07 -6.86
Peroxisomes 1.65 -6.90 -1.55 -1.60 -1.04 -0.97 -1.45 -3.83 0.27 -1.96 -0.96 -6.59 -1.68 -0.80 -1.18
Vacuole -7.75 -22.05 -25.32 -14.15 -16.01 1.10 -21.30 -18.45 -18.62 -11.31 -3.76 -29.60 -30.28 -28.77 -18.53
Vacuole Periphery -7.03 7.74 9.41 9.44 3.99 6.20 13.78 12.15 7.60 1.80 0.51 15.74 16.52 13.54 4.33
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication
Localization
Cell Percentages cytoplasm (100%)
Cell Cycle Regulation No
Subcompartmental Group cytoplasm-2

Rpl13b

Rpl13b


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rpl13b-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available