Standard name
Human Ortholog
Description Ribosomal 60S subunit protein L42A; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42A has a paralog, RPL42B, that arose from the whole genome duplication
DOWNLOAD

Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm 0.99 0.91 0.36 0.32 0.58 0.7 0.58 0.52 0.38 0.34 0.24 0.27 0.37 0.83 0.95 0.94 0.93 0.98 0.95 0.76 0.39 0.44 0.72 0.71
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0.05 0 0 0 0 0 0 0 0 0 0.05 0 0 0
Golgi 0 0 0.11 0.07 0.07 0 0 0 0 0 0 0 0.18 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 0 0.24 0.14 0.24 0.22 0 0 0 0.09 0 0 0 0.06 0 0 0 0
Nucleus 0 0 0 0 0 0 0 0.05 0.11 0.11 0.14 0.13 0 0 0 0 0 0 0 0 0.23 0.24 0.06 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0.08 0 0 0 0 0 0 0 0 0.07 0 0 0 0 0 0 0 0.05 0 0.09 0.08
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.05 0.07 0 0
Vac/Vac Membrane 0 0 0.63 0.54 0.4 0.25 0.37 0.39 0.3 0.42 0.42 0.45 0.51 0.11 0 0 0.05 0 0 0.06 0.08 0.13 0 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches 0 0 1 2 2 4 2 5 0 6 2 2 0 0 0 0 1 1 0 1 0 0 0 0
Bud 0 0 2 2 1 2 0 3 11 8 6 7 0 1 0 0 0 0 0 0 8 1 3 3
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1
Bud Site 0 0 0 0 0 0 0 1 8 0 1 5 0 0 0 0 0 0 – – – – – –
Cell Periphery 0 1 0 1 11 14 19 18 9 11 4 1 0 3 3 4 1 1 0 0 0 0 0 0
Cytoplasm 113 21 94 90 221 305 335 268 166 129 68 104 46 91 147 136 214 242 100 39 104 31 158 142
Endoplasmic Reticulum 1 1 2 1 5 3 6 9 8 4 4 5 0 2 0 0 15 4 1 1 5 0 2 4
Endosome 0 0 3 2 2 2 6 8 13 6 15 14 2 3 0 1 0 0 0 0 12 1 2 3
Golgi 0 0 28 20 25 7 5 14 2 4 1 3 22 1 0 1 7 3 0 0 0 0 0 2
Mitochondria 0 0 1 2 1 13 26 14 104 51 70 83 0 4 2 13 6 0 0 2 2 0 0 3
Nucleus 0 0 2 11 3 4 10 26 49 42 41 49 1 1 0 0 0 0 0 0 62 16 13 2
Nuclear Periphery 0 0 0 0 0 0 2 1 0 2 1 0 0 0 0 0 0 0 0 1 10 0 1 1
Nucleolus 0 0 0 23 2 1 3 7 14 5 12 13 9 4 1 0 0 0 0 0 12 0 18 16
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 1 1 1 0 2 2 0 0 0 0 0 0 0 12 4 5 5
Vac/Vac Membrane 0 0 162 152 153 111 212 200 133 156 120 171 64 12 4 3 12 4 1 3 22 9 7 6
Unique Cell Count 114 23 258 284 380 436 580 518 438 374 286 383 125 110 154 144 229 248 106 52 269 70 219 202
Labelled Cell Count 114 23 295 306 426 466 626 575 518 425 345 459 146 122 157 158 256 255 106 52 269 70 219 202


Cytoplasm

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) 80.8 92.0 23.7 25.1 20.7 16.1 13.7 13.5 11.1 11.1 10.0 10.2 29.0 23.7 19.5 61.0 71.1 90.5 27.4 23.6 25.7
Std Deviation (1e-4) 15.5 21.0 15.3 17.2 13.9 11.8 8.7 8.3 6.9 6.7 5.6 5.7 19.2 15.9 12.4 23.7 29.8 31.5 19.1 13.4 21.0
Intensity Change (Log2) – – – 0.09 -0.19 -0.56 -0.79 -0.81 -1.09 -1.1 -1.25 -1.21 0.29 0.0 -0.28 1.36 1.59 1.94 0.21 -0.0 0.12

WT3RAP60RAP140RAP220RAP300RAP380RAP460RAP540RAP620RAP700050100WT3HU80HU120HU160050100WT3rpd3Δ_1rpd3Δ_2rpd3Δ_3050100WT1AF100AF140AF180050100
rapamycinhydroxy-urearpd3 knockoutalpha-factorMultiple Condition Time-Course Intensity PlotsGFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)GFP Intensity (1e-4)

Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 2.9 2.9 3.0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -1.2 5.4 8.6 5.7 4.0 0.4 -0.5 -3.2 -2.5 0.1 8.1 11.8 11.3 13.0 14.6
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 3.5 0
Endosome 0 0 0 0 0 1.5 0 2.7 1.9 0 0 0 0 0 0
Golgi -1.6 -1.9 -5.4 -6.9 -4.7 -6.5 -5.5 -5.4 -5.8 1.8 -3.2 -4.2 -3.8 -3.3 -4.5
Mitochondria 0 0 2.3 3.1 0 8.3 6.0 8.3 7.8 0 0 0 4.5 0 0
Nucleus 2.4 0 0 0 3.0 5.1 5.1 5.9 5.5 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 4.7 0 0 0 0 2.9 0 3.3 3.0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole -2.2 -5.6 -9.7 -7.1 -6.4 -8.4 -5.2 -4.9 -4.5 -2.2 -9.1 -12.1 -11.9 -13.2 -14.7

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 34.7971 45.1004 45.8887 42.8744 33.6219 43.8163 46.1713 55.6768 59.9995 35.0979 62.7976 44.3867 37.5135 45.2074 33.7152 34.3297 42.3604 40.3416
Actin 0.0303 0.0006 0.0025 0.0017 0.0761 0.0011 0.0873 0.0005 0.0051 0.0003 0.0102 0.0002 0.1143 0.0001 0.0194 0.0013 0.0068 0.0107
Bud 0.0012 0.0005 0.001 0.0011 0.0032 0.0014 0.0046 0.0008 0.0026 0.0013 0.0015 0.0003 0.0015 0.0003 0.001 0.0006 0.0005 0.0004
Bud Neck 0.0013 0.0008 0.0008 0.0008 0.029 0.002 0.0016 0.0008 0.0015 0.0013 0.0019 0.0004 0.0017 0.0005 0.0008 0.0066 0.001 0.0022
Bud Periphery 0.002 0.0002 0.0004 0.0005 0.0049 0.001 0.0046 0.0002 0.0032 0.0009 0.0008 0.0001 0.0019 0.0001 0.0009 0.0004 0.0003 0.0005
Bud Site 0.0089 0.0008 0.0009 0.0005 0.0068 0.0002 0.0082 0.001 0.0061 0.0006 0.002 0.0001 0.0032 0.0004 0.0076 0.0085 0.0008 0.0001
Cell Periphery 0.0021 0.0016 0.0021 0.0006 0.004 0.0005 0.0059 0.0009 0.012 0.0002 0.0018 0.0002 0.0023 0.0001 0.0006 0.0007 0.0002 0.0004
Cytoplasm 0.2431 0.4226 0.3322 0.3657 0.1415 0.2651 0.3984 0.5409 0.4869 0.3287 0.6193 0.3821 0.4734 0.3925 0.1545 0.2677 0.3773 0.314
Cytoplasmic Foci 0.0926 0.0028 0.0021 0.0268 0.0083 0.0126 0.0369 0.0033 0.0045 0.0013 0.0302 0.009 0.0492 0.0006 0.0184 0.0024 0.0091 0.0018
Eisosomes 0.0032 0 0.0001 0 0.0027 0 0.0012 0 0 0 0.0003 0.0001 0.0012 0 0.0001 0 0.0001 0
Endoplasmic Reticulum 0.0132 0.0018 0.0015 0.0014 0.0059 0.0221 0.024 0.0017 0.0042 0.0015 0.0033 0.0006 0.0229 0.0003 0.0022 0.0006 0.0201 0.0075
Endosome 0.0389 0.0089 0.0031 0.0093 0.0112 0.0069 0.0308 0.0044 0.0055 0.0336 0.0264 0.0026 0.0327 0.0004 0.0061 0.0072 0.0292 0.0033
Golgi 0.0119 0.003 0.0009 0.0052 0.0071 0.0019 0.0131 0.0002 0.0009 0.0016 0.0401 0.0001 0.0293 0 0.0032 0.0024 0.0045 0.0008
Lipid Particles 0.0411 0.0013 0.0007 0.0202 0.0178 0.0069 0.0098 0.0005 0.0008 0.0002 0.0103 0.0028 0.0441 0 0.0217 0.0025 0.0153 0.0004
Mitochondria 0.0581 0.0019 0.0174 0.0219 0.0179 0.008 0.0083 0.0008 0.0078 0.0011 0.0136 0.0047 0.0244 0.0003 0.0148 0.0004 0.0036 0.0009
None 0.081 0.0003 0.0008 0.0009 0.0038 0.0003 0.0343 0.0023 0.0011 0.0003 0.024 0.0104 0.0182 0.0002 0.0017 0.0003 0.001 0.0004
Nuclear Periphery 0.0923 0.0344 0.0437 0.051 0.055 0.125 0.07 0.0214 0.0229 0.0191 0.0106 0.0452 0.0396 0.022 0.0203 0.0512 0.0524 0.0802
Nucleolus 0.0116 0.0132 0.0646 0.0132 0.0111 0.0021 0.0179 0.0228 0.0427 0.0594 0.0363 0.0245 0.0055 0.0259 0.0316 0.0386 0.0224 0.0033
Nucleus 0.1882 0.4838 0.4585 0.4355 0.5079 0.4946 0.1331 0.3681 0.3421 0.5111 0.1183 0.4916 0.0772 0.5506 0.6362 0.5932 0.4118 0.5555
Peroxisomes 0.0275 0.0001 0.0006 0.0082 0.005 0.0002 0.0053 0.0001 0.0006 0.0001 0.002 0.0004 0.0183 0 0.0253 0.0002 0.0298 0.0013
Punctate Nuclear 0.0149 0.0023 0.0238 0.0037 0.003 0.0053 0.0468 0.0122 0.0084 0.0028 0.0039 0.0017 0.0092 0.0015 0.0164 0.0034 0.0046 0.0021
Vacuole 0.0197 0.015 0.0337 0.0216 0.0592 0.0236 0.0498 0.0145 0.0347 0.0261 0.0341 0.0121 0.0185 0.0032 0.0131 0.0074 0.0069 0.0104
Vacuole Periphery 0.0169 0.0042 0.0086 0.0104 0.0186 0.0191 0.0082 0.0024 0.0065 0.0086 0.0093 0.0107 0.0113 0.001 0.0039 0.0042 0.0023 0.0038

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 2729.2932 3106.624 3853.4826 2797.2896 3342.5516 3019.7993 2571.7598 2481.7606 2781.9252 2392.1866
Translational Efficiency 1.2015 1.1373 0.9335 1.2059 1.2327 1.0053 1.0566 1.1924 0.984 1.1704

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
187 772 2093 76 934 1599 1705 217 1121 2371 3798 293

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 3283.90 4562.80 3382.40 3368.28 2256.65 4014.18 3484.85 3273.07 2428.01 4192.81 3428.39 3297.77
Standard Deviation 1083.59 2035.32 1332.70 1443.53 1334.59 2184.55 1321.99 1400.71 1351.50 2152.51 1328.88 1412.56
Intensity Change Log 2 — 0.474509 0.042637 0.036602 — 0.830923 0.626914 0.536462 — 0.630441 0.309703 0.261447

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000367 0.000494 0.000153 0.000353 0.000818 0.000725 0.000352 0.000308 0.000742 0.000650 0.000242 0.000320
Bud Neck 0.012677 0.012782 0.006109 0.020343 0.024709 0.007251 0.018148 0.005751 0.022702 0.009052 0.011514 0.009536
Bud Site 0.014952 0.010614 0.011089 0.034599 0.010617 0.012853 0.011523 0.015354 0.011340 0.012124 0.011284 0.020346
Cell Periphery 0.055451 0.044100 0.002278 0.002902 0.011632 0.008724 0.005743 0.020214 0.018941 0.020243 0.003833 0.015724
Cytoplasm 0.314464 0.338376 0.579182 0.222634 0.253914 0.382738 0.261037 0.340494 0.264015 0.368294 0.436360 0.309923
Cytoplasmic Foci 0.016808 0.013382 0.006712 0.032753 0.009719 0.013093 0.006682 0.041405 0.010902 0.013187 0.006698 0.039161
Eisosomes 0.000007 0.000008 0.000002 0.000023 0.000010 0.000009 0.000006 0.000006 0.000010 0.000009 0.000004 0.000010
Endoplasmic Reticulum 0.004011 0.002101 0.000346 0.000421 0.002378 0.001689 0.000500 0.000739 0.002650 0.001823 0.000415 0.000656
Endosome 0.002318 0.001750 0.001109 0.069317 0.001623 0.002720 0.003183 0.013949 0.001739 0.002404 0.002040 0.028311
Golgi 0.129561 0.106693 0.003912 0.018868 0.045241 0.062177 0.006582 0.021837 0.059307 0.076672 0.005111 0.021067
Lipid Particles 0.037780 0.028649 0.001689 0.003347 0.009266 0.007764 0.003043 0.015948 0.014023 0.014564 0.002297 0.012680
Mitochondria 0.001434 0.002872 0.001167 0.001770 0.004547 0.005114 0.002403 0.007904 0.004027 0.004384 0.001722 0.006313
Mitotic Spindle 0.003028 0.002965 0.032625 0.072316 0.009232 0.010253 0.050615 0.091096 0.008197 0.007880 0.040701 0.086224
None 0.002933 0.008128 0.010408 0.003340 0.010383 0.016550 0.012469 0.005460 0.009140 0.013808 0.011333 0.004911
Nuclear Periphery 0.000601 0.001243 0.001786 0.001353 0.001758 0.001751 0.002539 0.001123 0.001565 0.001585 0.002124 0.001183
Nuclear Periphery Foci 0.011513 0.015574 0.003710 0.004473 0.010103 0.014336 0.006021 0.005825 0.010338 0.014739 0.004748 0.005474
Nucleolus 0.002053 0.002366 0.000966 0.002572 0.013272 0.003360 0.002732 0.000824 0.011400 0.003036 0.001759 0.001277
Nucleus 0.068103 0.108319 0.285991 0.077163 0.436160 0.160424 0.512592 0.142538 0.374762 0.143459 0.387716 0.125580
Peroxisomes 0.000157 0.000098 0.000059 0.011071 0.000206 0.000205 0.000162 0.002187 0.000198 0.000170 0.000105 0.004491
Vacuole 0.144319 0.157253 0.034572 0.355623 0.069588 0.161332 0.070418 0.224951 0.082054 0.160003 0.050664 0.258846
Vacuole Periphery 0.177463 0.142233 0.016134 0.064759 0.074822 0.126933 0.023251 0.042087 0.091944 0.131915 0.019329 0.047968

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -2.53 2.70 -0.18 1.88 -2.24 1.66 8.48 9.78 8.53 3.17 1.62 10.44 8.74 8.26 -0.60
Bud Neck -1.10 0.48 -1.75 -1.21 -2.36 9.53 -2.98 1.04 -5.05 3.27 7.60 1.89 0.42 -4.69 -0.82
Bud Site 0.61 2.07 -2.19 -2.61 -3.30 -0.86 0.22 -3.88 -3.49 -4.06 -0.45 2.05 -4.52 -4.40 -5.62
Cell Periphery 1.83 7.72 7.70 14.37 -0.34 1.33 6.43 2.52 1.88 -1.33 -0.86 9.78 6.67 9.13 -1.52
Cytoplasm -0.44 -6.83 1.96 2.73 8.14 -11.87 4.01 -2.93 3.88 -5.18 -10.54 -11.23 -1.89 4.53 4.37
Cytoplasmic Foci 0.79 0.89 -3.83 -4.09 -4.11 -0.47 -0.43 -5.67 -5.61 -5.60 -0.22 -0.26 -6.89 -6.91 -6.91
Eisosomes -1.58 3.12 -2.58 -1.98 -3.94 1.33 2.78 -0.07 -0.80 -1.22 1.13 7.38 -1.12 -1.69 -4.11
Endoplasmic Reticulum 2.71 5.74 5.72 8.63 -0.00 2.29 7.22 7.65 9.64 2.35 2.98 9.33 9.41 12.70 1.12
Endosome 1.66 3.76 -1.75 -1.83 -1.89 -3.46 0.18 -1.44 -0.89 -1.46 -2.48 2.02 -2.27 -2.03 -2.43
Golgi 2.48 11.78 11.35 18.21 -1.40 -4.38 10.81 9.19 16.98 -1.79 -4.17 14.85 13.32 24.35 -2.26
Lipid Particles 1.74 5.95 3.14 2.44 -2.96 0.64 5.10 -1.02 -1.78 -5.58 -0.41 7.45 0.90 1.46 -5.81
Mitochondria -1.75 0.16 0.99 4.19 3.60 -1.40 2.35 1.67 2.53 0.70 -1.35 3.35 2.05 3.04 0.46
Mitotic Spindle -0.07 -14.67 -3.77 -3.77 -1.52 -0.36 -8.77 -7.32 -7.30 -5.10 0.26 -14.17 -8.16 -8.26 -4.99
None -3.48 -10.24 -1.37 2.05 5.48 -3.18 -2.56 0.44 3.32 2.69 -3.18 -3.17 0.57 3.53 3.58
Nuclear Periphery -5.28 -17.67 -4.35 -3.23 0.60 -0.10 -10.24 -3.68 -3.49 4.50 -0.33 -12.97 -5.02 -4.89 3.57
Nuclear Periphery Foci -0.32 2.32 1.55 3.48 -1.26 -1.80 4.73 2.07 3.98 -1.73 -1.96 4.82 2.49 5.07 -1.60
Nucleolus -0.30 0.35 0.48 0.99 0.31 6.62 3.51 5.68 -0.66 4.02 6.58 5.44 5.92 -0.33 1.92
Nucleus -3.31 -14.05 -1.93 0.36 7.95 18.00 -7.85 13.17 0.46 21.35 16.56 -3.27 12.39 0.33 18.07
Peroxisomes 0.59 1.65 -1.20 -1.21 -1.23 1.24 0.58 -2.11 -2.34 -2.18 1.80 3.50 -1.98 -2.14 -2.17
Vacuole -0.51 6.98 -4.69 -4.74 -7.98 -13.84 2.18 -7.82 -2.43 -8.62 -13.13 5.53 -9.51 -4.59 -11.51
Vacuole Periphery 2.72 11.35 9.84 12.63 -0.75 -7.59 10.66 9.59 20.11 -0.41 -6.27 14.49 12.58 24.39 -0.74
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Ribosomal 60S subunit protein L42A; homologous to mammalian ribosomal protein L36A, no bacterial homolog; RPL42A has a paralog, RPL42B, that arose from the whole genome duplication
Localization
Cell Percentages cytoplasm (64%)
Cell Cycle Regulation No
Subcompartmental Group cytoplasm-2

Rpl42a

Rpl42a


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Rpl42a-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available