Standard name | |
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Human Ortholog | |
Description | Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 0 | 0 | 0 | 1 | 2 | 0 | 4 | 0 | 3 | 2 | 1 | 1 | 2 | 1 | 3 | 7 | 4 | 15 | 5 | 2 | 4 | 10 | 9 |
Bud | 2 | 1 | 0 | 0 | 2 | 1 | 2 | 4 | 1 | 7 | 4 | 6 | 2 | 0 | 0 | 0 | 2 | 0 | 1 | 1 | 0 | 0 | 2 | 2 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 0 | 0 | 2 | 2 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 3 | 7 | 0 | 0 | 2 | 1 | 2 | 1 | 1 | 0 | 1 | 1 | 0 | 2 | 0 | 4 | 4 | 4 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 320 | 371 | 34 | 71 | 193 | 213 | 294 | 369 | 142 | 160 | 129 | 197 | 308 | 524 | 739 | 397 | 251 | 289 | 300 | 359 | 63 | 206 | 453 | 566 |
Endoplasmic Reticulum | 0 | 4 | 0 | 1 | 1 | 8 | 3 | 9 | 4 | 1 | 3 | 5 | 4 | 5 | 0 | 19 | 10 | 10 | 4 | 0 | 1 | 0 | 0 | 2 |
Endosome | 5 | 1 | 2 | 0 | 5 | 9 | 1 | 3 | 2 | 4 | 1 | 4 | 1 | 6 | 5 | 21 | 8 | 12 | 11 | 4 | 4 | 4 | 11 | 17 |
Golgi | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
Mitochondria | 3 | 1 | 0 | 1 | 2 | 11 | 22 | 38 | 43 | 41 | 77 | 62 | 0 | 1 | 0 | 3 | 2 | 2 | 3 | 2 | 5 | 1 | 4 | 4 |
Nucleus | 0 | 0 | 0 | 0 | 1 | 6 | 4 | 8 | 4 | 8 | 6 | 13 | 0 | 2 | 0 | 7 | 5 | 7 | 0 | 0 | 0 | 0 | 0 | 1 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 1 | 2 | 0 | 0 | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 1 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 |
SpindlePole | 1 | 0 | 1 | 2 | 4 | 1 | 1 | 3 | 0 | 3 | 3 | 0 | 1 | 2 | 2 | 3 | 1 | 7 | 6 | 0 | 2 | 1 | 8 | 15 |
Vac/Vac Membrane | 2 | 4 | 0 | 1 | 5 | 10 | 16 | 42 | 23 | 26 | 11 | 21 | 3 | 4 | 10 | 73 | 15 | 51 | 8 | 3 | 4 | 2 | 2 | 6 |
Unique Cell Count | 331 | 379 | 36 | 75 | 207 | 242 | 323 | 449 | 194 | 225 | 202 | 277 | 315 | 538 | 752 | 474 | 278 | 342 | 359 | 390 | 90 | 224 | 499 | 636 |
Labelled Cell Count | 338 | 390 | 37 | 76 | 216 | 265 | 346 | 484 | 222 | 255 | 238 | 310 | 322 | 548 | 757 | 533 | 306 | 387 | 359 | 390 | 90 | 224 | 499 | 636 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.5 | 6.7 | 7.1 | 6.5 | 7.3 | 6.4 | 6.2 | 6.5 | 6.0 | 5.8 | 5.3 | 5.3 | 7.0 | 7.0 | 7.0 | 8.8 | 8.4 | 7.9 | 6.4 | 6.7 | 7.1 |
Std Deviation (1e-4) | 0.5 | 0.8 | 0.9 | 1.5 | 1.4 | 1.4 | 1.4 | 1.3 | 5.5 | 1.5 | 5.9 | 1.3 | 0.9 | 0.9 | 0.9 | 1.8 | 1.4 | 1.7 | 0.8 | 0.9 | 1.1 |
Intensity Change (Log2) | – | – | – | -0.14 | 0.04 | -0.16 | -0.2 | -0.13 | -0.26 | -0.29 | -0.42 | -0.42 | -0.02 | -0.03 | -0.02 | 0.3 | 0.23 | 0.15 | -0.16 | -0.08 | 0.0 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 0 | -0.3 | -1.1 | -0.7 | -1.9 | -2.8 | -3.0 | -3.6 | -3.0 | 1.2 | 1.0 | 1.6 | -1.7 | -0.8 | -1.6 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Endosome | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 0 | 0 | 3.1 | 2.8 | 4.5 | 3.2 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 2.5 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 1.5161 | 1.4266 | 1.1645 | 1.231 | 0.9047 | 1.1412 | 0.623 | 1.703 | 1.5022 | 0.7054 | 0.9446 | 1.5491 | 0.13 | 0.6507 | 0.5445 | 0.2838 | 0.1834 | 0.4897 |
Actin | 0.0477 | 0.0117 | 0.0119 | 0.0018 | 0.0005 | 0.0016 | 0.0019 | 0.0003 | 0.0066 | 0.0032 | 0.0014 | 0.0008 | 0.0394 | 0.0009 | 0.012 | 0.0263 | 0.0001 | 0.0126 |
Bud | 0.0014 | 0.0005 | 0.0008 | 0.0007 | 0 | 0.0001 | 0.0033 | 0.005 | 0.0003 | 0.0001 | 0.0072 | 0.0001 | 0.0005 | 0.0002 | 0.0008 | 0.0017 | 0 | 0.0004 |
Bud Neck | 0.0077 | 0.0003 | 0.0037 | 0.0007 | 0.0004 | 0.0127 | 0.0118 | 0.0001 | 0.0004 | 0.0002 | 0.0003 | 0.0008 | 0.0008 | 0.0001 | 0.0004 | 0.001 | 0.0003 | 0.003 |
Bud Periphery | 0.0021 | 0.0005 | 0.0007 | 0.0009 | 0 | 0.0001 | 0.0024 | 0.0009 | 0.0003 | 0 | 0.005 | 0 | 0.0006 | 0.0002 | 0.0009 | 0.0014 | 0 | 0.0007 |
Bud Site | 0.0366 | 0.0042 | 0.0122 | 0.0011 | 0.0001 | 0.0001 | 0.0112 | 0.0058 | 0.0007 | 0.0001 | 0.0001 | 0.0002 | 0.0025 | 0.001 | 0.0066 | 0.004 | 0.0001 | 0.0003 |
Cell Periphery | 0.0016 | 0.0003 | 0.0003 | 0.0001 | 0 | 0.0001 | 0.0006 | 0.0002 | 0.0001 | 0 | 0.0001 | 0.0002 | 0.0002 | 0.0001 | 0.0004 | 0.0001 | 0 | 0.0001 |
Cytoplasm | 0.329 | 0.6754 | 0.6114 | 0.606 | 0.6019 | 0.7034 | 0.517 | 0.617 | 0.4925 | 0.5815 | 0.3873 | 0.7431 | 0.5406 | 0.7787 | 0.6311 | 0.6665 | 0.8716 | 0.726 |
Cytoplasmic Foci | 0.0489 | 0.0196 | 0.0692 | 0.0477 | 0.1079 | 0.0933 | 0.0599 | 0.0155 | 0.0319 | 0.2013 | 0.0152 | 0.0433 | 0.0638 | 0.0279 | 0.05 | 0.0346 | 0.0125 | 0.0643 |
Eisosomes | 0.0004 | 0.0001 | 0.0001 | 0 | 0 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0.0002 | 0.0002 | 0.0005 | 0 | 0.0002 | 0.0001 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0102 | 0.0049 | 0.0047 | 0.0032 | 0.0024 | 0.0073 | 0.0032 | 0.0024 | 0.002 | 0.0013 | 0.0043 | 0.0016 | 0.0079 | 0.003 | 0.0029 | 0.0028 | 0.002 | 0.003 |
Endosome | 0.0642 | 0.0079 | 0.0326 | 0.0762 | 0.0087 | 0.0271 | 0.0074 | 0.0015 | 0.0093 | 0.0123 | 0.0035 | 0.0028 | 0.017 | 0.0041 | 0.0225 | 0.024 | 0.0048 | 0.0335 |
Golgi | 0.0131 | 0.0029 | 0.0082 | 0.0139 | 0.0023 | 0.0024 | 0.0022 | 0.0004 | 0.0125 | 0.0012 | 0.0004 | 0.0004 | 0.0074 | 0.0006 | 0.0069 | 0.0177 | 0.0002 | 0.0041 |
Lipid Particles | 0.0174 | 0.0005 | 0.0023 | 0.0071 | 0.0185 | 0.0034 | 0.0059 | 0.0001 | 0.0034 | 0.0006 | 0.0015 | 0.0018 | 0.0044 | 0.0003 | 0.0046 | 0.0217 | 0 | 0.0012 |
Mitochondria | 0.0204 | 0.0077 | 0.002 | 0.0165 | 0.0018 | 0.0013 | 0.0028 | 0.0002 | 0.0027 | 0.0003 | 0.0017 | 0.0014 | 0.0068 | 0.0002 | 0.0084 | 0.0694 | 0.0001 | 0.0014 |
None | 0.2773 | 0.2563 | 0.2238 | 0.2036 | 0.2257 | 0.1256 | 0.3335 | 0.347 | 0.4178 | 0.1801 | 0.5613 | 0.1836 | 0.2855 | 0.1752 | 0.2306 | 0.1048 | 0.1038 | 0.1373 |
Nuclear Periphery | 0.0182 | 0.0016 | 0.0029 | 0.0019 | 0.0004 | 0.0111 | 0.0061 | 0.0005 | 0.0005 | 0.0006 | 0.0019 | 0.0005 | 0.002 | 0.0005 | 0.0009 | 0.0015 | 0.0006 | 0.0008 |
Nucleolus | 0.0042 | 0.0001 | 0.0005 | 0.0003 | 0.0001 | 0.0001 | 0.0018 | 0.0001 | 0.0002 | 0 | 0.0003 | 0.0104 | 0.0001 | 0 | 0.0001 | 0.0002 | 0 | 0.0001 |
Nucleus | 0.0234 | 0.0016 | 0.0033 | 0.0012 | 0.0008 | 0.0033 | 0.0088 | 0.0015 | 0.0012 | 0.001 | 0.003 | 0.0027 | 0.0016 | 0.0009 | 0.0014 | 0.0028 | 0.0018 | 0.0032 |
Peroxisomes | 0.0322 | 0.0009 | 0.0033 | 0.0069 | 0.0266 | 0.0019 | 0.0137 | 0.0007 | 0.0022 | 0.0088 | 0.001 | 0.0016 | 0.0124 | 0.0009 | 0.0164 | 0.01 | 0.0001 | 0.0037 |
Punctate Nuclear | 0.0241 | 0.0007 | 0.0033 | 0.0013 | 0.001 | 0.0021 | 0.0018 | 0.0004 | 0.0012 | 0.0067 | 0.0031 | 0.0036 | 0.0031 | 0.0045 | 0.0011 | 0.0009 | 0.0006 | 0.0019 |
Vacuole | 0.0153 | 0.0019 | 0.002 | 0.006 | 0.0005 | 0.0019 | 0.0037 | 0.0005 | 0.0135 | 0.0003 | 0.0011 | 0.0006 | 0.0024 | 0.0006 | 0.0014 | 0.0054 | 0.0012 | 0.002 |
Vacuole Periphery | 0.0044 | 0.0004 | 0.0007 | 0.0029 | 0.0001 | 0.0011 | 0.0009 | 0.0001 | 0.0008 | 0.0001 | 0.0003 | 0.0003 | 0.0006 | 0.0001 | 0.0004 | 0.003 | 0.0001 | 0.0004 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 11.9452 | 20.8599 | 16.5846 | 17.4702 | 14.0468 | 15.5479 | 20.5893 | 21.6919 | 20.1691 | 19.5542 |
Translational Efficiency | 0.6299 | 0.2998 | 0.3986 | 0.4029 | 0.361 | 0.5134 | 0.4179 | 0.3978 | 0.3956 | 0.4482 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✔ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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