Standard name
Human Ortholog
Description Elongin C, conserved among eukaryotes; forms a complex with Cul3p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; plays a role in global genomic repair
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Micrographs

ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Bud – 0 0.06 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Bud Neck – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Bud Site – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – – – – – –
Cell Periphery – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Cytoplasm – 0.93 0.93 0.77 0.65 0.59 0.54 0.5 0.4 0.37 0.31 0.36 0.88 0.93 0.93 0.6 0.6 0.6 – 0.89 0.77 0.83 0.83 0.83
Endoplasmic Reticulum – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0.06 0 0 – 0 0 0 0 0
Endosome – 0 0 0 0.07 0 0 0 0 0 0 0 0 0 0 0 0.06 0 – 0 0 0 0 0
Golgi – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Mitochondria – 0 0.1 0.22 0.12 0.45 0.46 0.49 0.63 0.6 0.68 0.68 0 0 0 0 0 0 – 0 0 0 0 0
Nucleus – 0 0 0 0 0 0.05 0.05 0.08 0.09 0.11 0.11 0.05 0 0 0 0 0 – 0 0 0.05 0 0
Nuclear Periphery – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Nucleolus – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Peroxisomes – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
SpindlePole – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
Vac/Vac Membrane – 0.07 0.06 0.12 0.32 0.18 0.19 0.18 0.18 0.15 0.13 0.16 0.14 0.1 0.1 0.54 0.49 0.44 – 0 0.1 0.07 0.06 0
ensLOC DeepLoc
Localization WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 WT1 WT2 WT3 AF100 AF140 AF180
Cortical Patches – 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 – 0 1 0 1 3
Bud – 1 4 6 1 10 17 12 12 8 22 19 0 0 0 0 0 0 – 2 1 0 5 11
Bud Neck – 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 3 9
Bud Site – 0 0 0 0 0 3 1 4 4 4 11 0 0 0 0 0 0 – – – – – –
Cell Periphery – 0 0 0 0 0 0 0 1 1 0 2 0 0 0 0 1 1 – 0 0 0 0 0
Cytoplasm – 161 63 209 270 254 394 446 201 248 178 257 322 540 587 31 76 27 – 164 69 75 422 494
Endoplasmic Reticulum – 2 0 0 0 0 0 0 0 0 2 0 4 0 1 3 1 0 – 1 0 1 2 1
Endosome – 1 1 3 31 6 5 14 5 4 4 7 4 5 4 1 7 2 – 0 2 0 6 6
Golgi – 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 – 0 0 0 0 3
Mitochondria – 1 7 60 48 195 341 432 318 398 388 488 2 0 2 0 0 1 – 1 1 1 3 4
Nucleus – 7 0 3 9 18 36 48 38 63 63 81 18 3 1 2 2 0 – 5 2 4 15 17
Nuclear Periphery – 0 1 0 0 0 1 1 1 0 2 0 0 0 2 0 0 0 – 0 0 0 0 0
Nucleolus – 0 0 0 0 1 1 4 0 3 3 2 0 0 0 0 0 0 – 0 0 0 0 0
Peroxisomes – 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 – 0 0 0 0 0
SpindlePole – 1 0 0 0 0 2 3 0 1 1 3 0 0 0 0 0 0 – 0 0 0 9 8
Vac/Vac Membrane – 12 4 34 135 77 140 159 91 99 76 113 52 60 61 28 62 20 – 7 9 6 28 25
Unique Cell Count 173 68 273 416 434 736 889 506 667 570 720 368 582 633 52 126 45 184 90 91 508 594
Labelled Cell Count 187 80 315 494 561 942 1120 671 829 743 983 403 609 658 65 150 52 184 90 91 508 594


Cytoplasm, Nucleus

(Huh et al. Nature 2003 425:686)
Screen WT1 WT2 WT3 RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3 AF100 AF140 AF180
Mean Cell GFP Intensity (1e-4) – 5.5 4.7 4.3 4.8 4.0 3.9 3.9 3.6 3.9 3.6 3.6 5.9 5.9 5.8 9.6 9.7 9.5 5.4 5.9 6.1
Std Deviation (1e-4) – 0.7 0.7 0.9 1.4 1.3 1.0 1.1 0.9 1.1 0.9 0.8 0.9 1.0 1.0 1.9 1.4 2.0 0.7 1.2 1.2
Intensity Change (Log2) – – – -0.13 0.03 -0.24 -0.27 -0.27 -0.37 -0.27 -0.4 -0.39 0.32 0.33 0.3 1.04 1.05 1.02 0.21 0.34 0.38


Localization RAP60 RAP140 RAP220 RAP300 RAP380 RAP460 RAP540 RAP620 RAP700 HU80 HU120 HU160 rpd3Δ_1 rpd3Δ_2 rpd3Δ_3
Cortical Patches 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Neck 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Bud Site 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cell Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Cytoplasm -3.0 -4.6 -5.4 -6.2 -6.8 -8.2 -8.8 -9.9 -9.1 -1.2 0 0 -4.4 -4.8 -4.2
Endoplasmic Reticulum 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Endosome 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Golgi 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Mitochondria 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleus 0 0 0 0 0 0 2.7 2.9 2.9 0 0 0 0 0 0
Nuclear Periphery 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Nucleolus 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Peroxisomes 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
SpindlePole 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Vacuole 1.5 4.5 2.5 2.7 2.5 2.5 2.0 1.8 2.2 1.9 1.2 1.0 5.9 6.1 4.9

Images

Circle plot not available

Protein Concentration and Protein Localization Data

R1 R2 R3
G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Pre-START G1 Post-START S/G2 Metaphase Anaphase Telophase
Concentration 0.9468 1.9506 1.3937 0.9023 1.0636 1.4366 0.1536 0.9047 0.2712 0.0796 -0.0471 0.3081 1.8764 2.2365 2.1085 1.8846 2.2099 2.3129
Actin 0.0175 0.0008 0.0121 0.0012 0.0719 0.0061 0.0495 0.0037 0.0037 0.0132 0.0003 0.0007 0.0816 0.0004 0.0006 0.0098 0.0191 0.0007
Bud 0.0012 0.007 0.0018 0.0003 0.0035 0.0003 0.0011 0.0008 0.0002 0.0004 0.0001 0.0001 0.0007 0.0001 0.0002 0.0003 0.0007 0.0001
Bud Neck 0.0024 0.0004 0.0036 0.0013 0.0039 0.0047 0.0023 0.0003 0.0005 0.0019 0.0007 0.0017 0.0018 0.0002 0.0007 0.0008 0.0015 0.0018
Bud Periphery 0.0012 0.0012 0.0011 0.0001 0.0059 0.0004 0.0011 0.0003 0.0002 0.0001 0.0001 0.0001 0.001 0 0.0001 0.0003 0.001 0
Bud Site 0.0029 0.0061 0.0032 0.0005 0.0083 0.0006 0.0069 0.0011 0.0009 0.0011 0.0002 0.0002 0.0056 0.0008 0.0007 0.0005 0.0021 0.0001
Cell Periphery 0.0003 0.0001 0.0001 0 0.0004 0 0.0002 0 0.0001 0 0 0 0.0005 0.0001 0 0 0.0002 0
Cytoplasm 0.4893 0.6121 0.5451 0.4455 0.4516 0.5628 0.4891 0.7198 0.5784 0.6356 0.5712 0.5674 0.2169 0.7121 0.627 0.5928 0.4254 0.6634
Cytoplasmic Foci 0.024 0.0068 0.0188 0.0116 0.01 0.0116 0.0239 0.0056 0.0142 0.0225 0.0123 0.0065 0.0551 0.0019 0.0058 0.0046 0.0292 0.0036
Eisosomes 0.0003 0 0.0002 0 0.0011 0 0.0003 0 0 0 0 0 0.0009 0 0 0.0002 0.0002 0.0003
Endoplasmic Reticulum 0.0048 0.0044 0.0045 0.0061 0.0086 0.0045 0.0075 0.0062 0.0062 0.0051 0.004 0.0035 0.0222 0.0029 0.0045 0.0027 0.0016 0.0044
Endosome 0.0218 0.0039 0.0096 0.0037 0.0442 0.0125 0.0387 0.0045 0.0201 0.0067 0.0365 0.0058 0.047 0.0008 0.008 0.0029 0.034 0.0026
Golgi 0.0037 0.0002 0.0044 0.0008 0.0117 0.0014 0.0166 0.0003 0.0145 0.0018 0.0014 0.0026 0.0179 0.0001 0.0085 0.0017 0.0673 0.0001
Lipid Particles 0.0058 0.0002 0.0079 0.0069 0.0077 0.0013 0.0118 0.0002 0.0029 0.0153 0.0032 0.0023 0.0552 0.0001 0.0015 0.01 0.065 0.0001
Mitochondria 0.003 0.0009 0.0022 0.0008 0.0354 0.001 0.0086 0.0012 0.0229 0.0009 0.0006 0.0156 0.0084 0.0002 0.0023 0.0243 0.0384 0.0004
None 0.1329 0.1618 0.1523 0.209 0.0833 0.1158 0.1352 0.1025 0.1358 0.1112 0.1139 0.0473 0.1791 0.1307 0.0699 0.1463 0.1583 0.0543
Nuclear Periphery 0.012 0.0077 0.0141 0.0162 0.0427 0.0156 0.0181 0.0077 0.0113 0.0075 0.0123 0.01 0.0315 0.0055 0.0108 0.0118 0.002 0.0097
Nucleolus 0.0018 0.0005 0.0011 0.0009 0.0021 0.001 0.0006 0.0002 0.0008 0.0011 0.0007 0.0004 0.0031 0.0002 0.0005 0.0003 0.0004 0.0018
Nucleus 0.2447 0.1728 0.1822 0.2501 0.1757 0.2369 0.1543 0.1384 0.1733 0.12 0.227 0.3186 0.194 0.1398 0.2479 0.1592 0.1201 0.2389
Peroxisomes 0.0051 0.0002 0.01 0.0256 0.0077 0.0008 0.0119 0.0004 0.0029 0.0267 0.0004 0.0014 0.0559 0 0.0017 0.0191 0.0277 0.0001
Punctate Nuclear 0.02 0.0103 0.0226 0.0177 0.0145 0.0206 0.0149 0.0044 0.0072 0.0265 0.0113 0.0139 0.0104 0.0034 0.0072 0.0099 0.0021 0.0162
Vacuole 0.0043 0.0023 0.002 0.0011 0.0062 0.0017 0.0058 0.0019 0.0028 0.002 0.0028 0.0014 0.0082 0.0006 0.0019 0.0019 0.0021 0.001
Vacuole Periphery 0.001 0.0003 0.001 0.0005 0.0035 0.0005 0.0019 0.0003 0.0012 0.0003 0.001 0.0004 0.0029 0.0001 0.0003 0.0006 0.0015 0.0002

Sequencing Data

R1 R2
G1 Post-START S/G2 Metaphase Anaphase Telophase G1 Post-START S/G2 Metaphase Anaphase Telophase
Gene Expression 5.517 6.5758 2.4398 12.887 14.3061 7.352 14.1288 12.3407 21.082 14.6656
Translational Efficiency 5.5809 4.1723 10.5268 2.5526 2.045 3.601 2.2849 2.912 1.3548 1.8306

Hit Data

Dataset Hit
Protein Concentration ✘
Protein Localization ✘
Gene Expression ✘
Translational Efficiency ✘

Micrographs

Cell Count

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
1123 423 480 159 831 181 292 1582 1954 604 772 1741

Protein Abundance

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Mean 620.95 811.39 937.26 921.74 630.86 802.98 869.46 861.46 625.16 808.87 911.62 866.97
Standard Deviation 62.12 103.04 99.92 122.17 79.27 97.77 106.62 112.16 70.10 101.56 107.65 114.44
Intensity Change Log 2 — 0.385918 0.593972 0.569883 — 0.348044 0.462800 0.449464 — 0.366956 0.529357 0.510453

Localization Score (DeepLoc)

R1 R2 R1 & R2
WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14 WT UBP2 UBP14 UBP2UBP14
Actin 0.000052 0.000587 0.000603 0.001020 0.000090 0.000107 0.000454 0.000657 0.000068 0.000443 0.000547 0.000690
Bud Neck 0.010337 0.016877 0.003785 0.002349 0.005848 0.006080 0.009555 0.013782 0.008428 0.013642 0.005968 0.012738
Bud Site 0.001678 0.010842 0.008037 0.011670 0.002196 0.002285 0.027638 0.026464 0.001898 0.008278 0.015451 0.025113
Cell Periphery 0.000112 0.000142 0.000133 0.000235 0.000158 0.000116 0.000149 0.000198 0.000131 0.000134 0.000139 0.000202
Cytoplasm 0.462370* 0.437293* 0.093039 0.278293* 0.427245* 0.413303* 0.288301* 0.413566* 0.447432* 0.430104* 0.166895* 0.401212*
Cytoplasmic Foci 0.179699 0.109418 0.002774 0.033361 0.159787 0.145519 0.008762 0.014415 0.171231 0.120236 0.005039 0.016145
Eisosomes 0.000094 0.000076 0.000048 0.000101 0.000103 0.000083 0.000049 0.000040 0.000098 0.000078 0.000048 0.000045
Endoplasmic Reticulum 0.000512 0.002758 0.007617 0.007598 0.000836 0.000633 0.006564 0.002939 0.000650 0.002122 0.007219 0.003364
Endosome 0.005643 0.010552 0.001459 0.009490 0.003709 0.008154 0.001895 0.008947 0.004821 0.009833 0.001624 0.008997
Golgi 0.000783 0.001186 0.000063 0.005337 0.000761 0.001553 0.000080 0.002738 0.000774 0.001296 0.000070 0.002975
Lipid Particles 0.007356 0.004446 0.001514 0.002478 0.008738 0.004585 0.001436 0.001058 0.007944 0.004487 0.001485 0.001188
Mitochondria 0.003795 0.005350 0.000835 0.000698 0.005450 0.004391 0.001723 0.008029 0.004499 0.005063 0.001171 0.007359
Mitotic Spindle 0.000506 0.008493 0.000913 0.010557 0.001823 0.004052 0.007744 0.034777 0.001066 0.007162 0.003497 0.032565
None 0.010297 0.004588 0.006605 0.022880 0.008014 0.004054 0.004359 0.007899 0.009326 0.004428 0.005756 0.009267
Nuclear Periphery 0.000569 0.001300 0.001754 0.001725 0.000680 0.000681 0.003314 0.001838 0.000616 0.001115 0.002344 0.001827
Nuclear Periphery Foci 0.000335 0.001357 0.000881 0.002720 0.000409 0.000638 0.001341 0.000724 0.000366 0.001142 0.001055 0.000906
Nucleolus 0.002102 0.002666 0.000691 0.000792 0.002191 0.002804 0.001350 0.001621 0.002140 0.002708 0.000940 0.001545
Nucleus 0.287450* 0.306244* 0.841387* 0.504589* 0.347483* 0.355524* 0.567372* 0.381748* 0.312981* 0.321011* 0.737744* 0.392967*
Peroxisomes 0.004024 0.004648 0.000259 0.003782 0.003547 0.004545 0.000390 0.002823 0.003821 0.004617 0.000309 0.002911
Vacuole 0.021757 0.070019 0.027445 0.098067 0.020280 0.040340 0.067054 0.073879 0.021129 0.061125 0.042426 0.076088
Vacuole Periphery 0.000530 0.001157 0.000157 0.002258 0.000651 0.000553 0.000469 0.001857 0.000581 0.000976 0.000275 0.001894

Localization Changes (T-score)

R1 R2 R1 & R2
UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14 UBP2_WT UBP14_WT UBP2UBP14_WT UBP2UBP14_UBP2 UBP2UBP14_UBP14
Actin -5.77 -11.03 -6.38 -2.91 -2.34 -1.05 -5.64 -6.91 -6.49 2.67 -5.72 -11.37 -9.40 -0.60 3.39
Bud Neck -2.36 4.30 3.81 4.42 -0.92 -0.32 -1.03 -2.61 -1.64 -0.51 -2.69 2.24 -0.32 2.45 -2.39
Bud Site -4.19 -1.96 -2.69 0.66 -0.82 -0.36 -2.55 -5.56 -5.63 0.64 -4.10 -3.20 -6.54 -1.22 -0.71
Cell Periphery -2.15 -2.92 -5.69 -3.20 -3.58 2.68 0.16 1.94 -0.35 1.67 -0.37 -1.91 -0.12 0.15 0.96
Cytoplasm 3.15 38.15 14.02 9.82 -6.08 1.14 13.90 9.98 4.25 -7.53 2.97 35.74 16.42 8.17 -19.00
Cytoplasmic Foci 7.76 30.03 24.95 12.09 -2.49 1.01 24.22 24.08 10.80 -1.88 6.83 38.61 37.22 17.20 -5.13
Eisosomes 1.78 4.84 -2.62 -3.50 -5.12 1.47 4.07 10.26 4.03 3.61 2.50 6.42 11.30 4.77 2.68
Endoplasmic Reticulum -7.71 -15.15 -8.98 -6.82 -2.11 0.76 -10.23 -15.44 -16.27 5.96 -7.18 -18.16 -18.86 -7.72 8.36
Endosome -3.14 5.62 0.40 2.75 -2.32 -2.39 4.18 0.39 2.44 -2.05 -4.24 6.83 1.84 5.00 -2.47
Golgi -0.79 6.13 -0.43 -0.16 -1.12 -0.97 3.96 -0.17 0.85 -2.42 -1.25 7.09 -0.26 0.77 -2.69
Lipid Particles 3.29 9.40 6.35 2.28 -2.65 3.63 7.89 8.87 4.57 2.64 4.86 12.15 13.51 6.80 2.89
Mitochondria -0.35 3.27 3.33 1.62 0.23 0.42 2.44 1.33 0.39 -2.11 -0.02 3.95 1.50 0.85 -2.66
Mitotic Spindle -3.32 -1.46 -3.32 -2.05 -3.17 -0.60 -2.30 -7.30 -4.62 -2.86 -3.02 -2.53 -8.64 -5.05 -6.38
None 4.31 2.90 0.11 -2.17 -1.81 2.39 2.61 0.73 -3.47 -4.40 4.81 3.69 1.91 -4.70 -2.75
Nuclear Periphery -7.83 -14.64 -10.33 -7.51 -4.61 -0.40 -5.50 -21.89 -19.77 0.44 -7.34 -10.28 -24.88 -16.87 -2.45
Nuclear Periphery Foci -4.87 -5.18 -2.72 -2.15 -2.17 -1.87 -4.47 -8.08 -2.53 2.09 -5.11 -6.82 -5.78 -1.11 0.02
Nucleolus -0.62 4.60 3.67 3.78 -1.47 -1.04 3.01 3.15 1.81 -0.28 -1.21 5.46 4.50 3.43 -0.71
Nucleus -1.62 -44.51 -8.62 -6.95 13.15 -0.30 -12.85 -9.33 -4.67 7.67 -0.91 -37.74 -16.19 -10.34 23.14
Peroxisomes -0.86 8.76 1.40 1.74 -1.00 -0.61 5.04 3.74 2.50 -2.19 -1.15 9.62 6.13 5.53 -2.39
Vacuole -9.98 -6.26 -10.21 -6.06 -8.20 -3.91 -9.36 -24.05 -11.11 -1.66 -10.62 -10.94 -26.48 -10.60 -9.93
Vacuole Periphery -2.33 6.30 -0.20 0.95 -1.08 0.49 2.28 0.17 -0.33 -2.13 -1.88 4.98 -0.23 1.43 -3.05
Protein Complexes26S Proteasome complex37S mitochondrial small ribosomal subunit54S mitochondrial large ribosomal subunit60S cytosolic large ribosomal subunitAar2-U5 snRNPAnaphase-Promoting Complex variant 1Anaphase-Promoting Complex variant 2Anaphase-Promoting Complex variant 3Anaphase-Promoting Complex variant 4Arp2/3 complexATG1 kinase complexBLOC-1 complexCcr4-Not complexCentral kinetochore CTF19 complexCleavage and polyadenylation specificity factorcomplexCMG helicase complexCMG-Pol epsilon complexCOMPASS complexCOP9 signalosome COPI vesicle coat complexCoQ6 biosynthesis complexCore mediator complexCORVET complexCTF18-RFC complexCURI complex variant 1CURI complex variant 2CURI complex variant 3Cytoplasmic exosome complex, DIS3 variantDASH complexDNA-directed RNA Polymerase I complexDNA-directed RNA polymerase II complexDNA-directed RNA polymerase III complexDNA replication factor C complexEGO complexELG1-RFC complex Elongator holoenzyme complexEndoplasmic Reticulum Membrane ComplexEukaryotic translation initiation factor 2BcomplexEukaryotic translation initiation factor 3core complexExocystExomer complexFAR complexGeneral transcription factor complex TFIIDGeneral transcription factor complex TFIIHGET4-GET5 transmembrane domain recognition complexGID ubiquitin ligase complexGin4 complexGolgi transport complexGSE complexHMC complexHOPS complexINO80 chromatin remodeling complexLSM1-7 complexLsm1-7-Pat1 complexLSM2-7 complexLSM2-8 complexMCM complexMICOS complexMitochondrial electron transport complex IIIMitochondrial inner membrane pre-sequence translocasecomplexMitochondrial outer membrane translocase holocomplexMitochondrial proton-transporting ATP synthase complexMitochondrial pyruvate dehydrogenase complexNineTeen complexNOP8 60s ribosome pre-assembly complexNuA3 histone acetyltransferase complexNuA4 histone acetyltransferase complexNuclear condensin complexNuclear/nucleolar exosome complex, DIS3-RRP6 variantNuclear pore complexNucleolar ribonuclease MRP complexNucleolar ribonuclease P complexOligosaccharyl transferase complex variant 1Oligosaccharyl transferase complex variant 2PAF1 complexPAS complexPhosphatidylinositol 3-kinase complex IPolarisomePrefoldin complexPRP19-associated complexRad17 RFC-like complexRetromer complexRPD3L histone deacetylase complexRPD3S histone deacetylase complexRQC complexRSC complex variant RSC1RSC complex variant RSC2SAGA complexSCF-Met30 ubiquitin ligase complexSCF-Ufo1 ubiquitin ligase complexSEA complexSeptin complexSET3C histone deacetylase complexSignal recognition particleSLIK (SAGA-like) complexSmall ribosomal subunit processome, variant1Small ribosomal subunit processome, variant2Small ribosomal subunit processome, variant3SMC5-SMC6 SUMO ligase complexSm complexSpliceosomal commitment complexSPOTS complexSWI/SNF chromatin remodelling complexSwr1 chromatin remodelling complexTHO complexTranscription factor TFIIIC complexTranslocon complexTRAPPIII protein complexTRAPPII protein complexTRAPPI protein complexTREX complexU1 snRNPU2 snRNPU4 snRNPU4/U6 snRNPU4/U6.U5 tri-snRNP complexU5 snRNPU6 snRNP complexUTP-A complexUTP-B complexUTP-C complex variant 1UTP-C complex variant 2UTP-C complex variant 3Vacuolar proton translocating ATPase complex,Golgi variantVacuolar proton translocating ATPase complex,vacuole variantCellular Components••••••••••••••••actinbud neckcell peripherycytoplasmendosomeERGolgimitochondrionmixednuclear peripherynucleolusnucleusperoxisomespindle polevacuolar membranevacuole
Standard name
Human Ortholog
Description Elongin C, conserved among eukaryotes; forms a complex with Cul3p that polyubiquitylates monoubiquitylated RNA polymerase II to trigger its proteolysis; plays a role in global genomic repair
Localization
Cell Percentages cytoplasm (30%), nucleus (6%), mixed (44%)
Cell Cycle Regulation No
Subcompartmental Group N/A

Elc1

Elc1


Nearest neighbours ( genes)

correlation threshold

0.6

1.0

0.80


Biological Process (Gene Ontology)
Molecular Function (Gene Ontology)
Cellular Component (Gene Ontology)

Endocytosis
Temp Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Vph1-GFP)
37℃
RT
Cell Cycle Omics

CYCLoPs (Elc1-GFP)
Gene / Allele Actin Patch (Sac6-tdTomato) Cortical Patch (Sla1-GFP) Late Endosome (Snf7-GFP) Vacuole (Sac6-tdTomato)
Gene Images
Gene Images
Images are not yet available
Images are not yet available