Standard name | |
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Human Ortholog | |
Description | Cytoplasmic protein of unknown function; induced in response to mycotoxin patulin; ubiquitinated protein similar to the human ring finger motif protein RNF10; predicted to be involved in repair of alkylated DNA due to interaction with MAG1 |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 1 | 0 | 0 | 4 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 3 | 0 | 0 | 0 |
Bud | 0 | 2 | 1 | 0 | 2 | 3 | 2 | – | 1 | 4 | 8 | 2 | 1 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 1 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 5 | 4 | 1 | 9 | 6 | 11 | – | 6 | 15 | 8 | 14 | 0 | 1 | 6 | – | 32 | 32 | 0 | 0 | 1 | 0 | 0 | 0 |
Cytoplasm | 90 | 150 | 196 | 131 | 284 | 302 | 447 | – | 243 | 286 | 218 | 247 | 170 | 212 | 270 | – | 347 | 331 | 90 | 144 | 187 | 74 | 176 | 177 |
Endoplasmic Reticulum | 1 | 2 | 0 | 0 | 1 | 0 | 3 | – | 0 | 0 | 2 | 20 | 0 | 0 | 2 | – | 13 | 14 | 0 | 0 | 3 | 0 | 0 | 0 |
Endosome | 0 | 0 | 1 | 0 | 0 | 1 | 1 | – | 3 | 4 | 5 | 2 | 0 | 1 | 0 | – | 0 | 4 | 0 | 0 | 2 | 1 | 0 | 0 |
Golgi | 0 | 2 | 0 | 0 | 1 | 0 | 1 | – | 2 | 0 | 0 | 0 | 0 | 0 | 0 | – | 3 | 2 | 0 | 1 | 0 | 0 | 0 | 1 |
Mitochondria | 3 | 1 | 0 | 8 | 8 | 32 | 71 | – | 67 | 90 | 147 | 103 | 0 | 0 | 0 | – | 3 | 6 | 0 | 1 | 6 | 0 | 3 | 2 |
Nucleus | 0 | 0 | 1 | 4 | 1 | 0 | 1 | – | 4 | 1 | 1 | 5 | 1 | 1 | 1 | – | 1 | 4 | 0 | 0 | 1 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 2 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 1 | 0 | 0 | 0 | 1 | – | 0 | 0 | 2 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 1 | 1 | 1 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | – | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 0 | 0 | 3 | 0 | 5 | 3 | 7 | – | 3 | 21 | 5 | 7 | 0 | 2 | 1 | – | 7 | 10 | 0 | 2 | 3 | 2 | 0 | 2 |
Unique Cell Count | 91 | 154 | 201 | 133 | 294 | 322 | 501 | 302 | 362 | 326 | 346 | 171 | 215 | 273 | 358 | 351 | 92 | 155 | 215 | 81 | 185 | 190 | ||
Labelled Cell Count | 95 | 162 | 207 | 144 | 312 | 348 | 546 | 330 | 422 | 398 | 405 | 172 | 217 | 282 | 406 | 404 | 92 | 155 | 215 | 81 | 185 | 190 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 5.6 | 7.5 | 7.0 | 6.4 | 7.2 | 5.9 | 6.2 | – | 5.5 | 5.7 | 5.1 | 5.4 | 7.0 | 7.2 | 6.8 | – | 8.6 | 8.1 | 5.5 | 6.5 | 7.0 |
Std Deviation (1e-4) | 0.6 | 1.1 | 1.4 | 1.1 | 1.4 | 1.3 | 1.1 | – | 1.4 | 1.3 | 1.3 | 1.0 | 0.7 | 1.2 | 0.9 | – | 1.5 | 1.4 | 0.5 | 0.9 | 1.1 |
Intensity Change (Log2) | – | – | – | -0.12 | 0.03 | -0.24 | -0.18 | – | -0.35 | -0.29 | -0.46 | -0.38 | -0.0 | 0.04 | -0.04 | – | 0.29 | 0.21 | -0.35 | -0.11 | -0.01 |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Cell Periphery | 0 | 0.7 | 0 | 0 | – | 0 | 1.4 | 0 | 1.3 | 0 | 0 | 0 | – | 3.2 | 3.3 |
Cytoplasm | 0.6 | -0.6 | -1.9 | -3.6 | – | -5.6 | -6.0 | -8.3 | -7.5 | 1.5 | 0.8 | 1.2 | – | -0.4 | -1.7 |
Endoplasmic Reticulum | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 3.5 | 0 | 0 | 0 | – | 0 | 2.9 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Mitochondria | 0 | 0 | 4.6 | 5.6 | – | 7.2 | 7.7 | 11.2 | 8.6 | 0 | 0 | 0 | – | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | – | 0 | 2.4 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | -0.1539 | 0.4065 | 0.1792 | -0.0851 | -0.2018 | -0.1677 | 0.4052 | 1.4019 | 1.2065 | 1.4339 | 0.3508 | 1.1567 | 0.3634 | 1.9958 | 1.1459 | 1.2657 | 1.2436 | 1.1177 |
Actin | 0.0395 | 0.0222 | 0.0119 | 0.0015 | 0.0043 | 0.0259 | 0.0041 | 0.0196 | 0.0133 | 0.0047 | 0.0476 | 0.0031 | 0.0142 | 0.0005 | 0.0033 | 0.0016 | 0.0012 | 0.0045 |
Bud | 0.0004 | 0.0007 | 0.0016 | 0.0005 | 0.0003 | 0.0003 | 0.0171 | 0.0393 | 0.0325 | 0.0116 | 0.0083 | 0.0036 | 0.0004 | 0.004 | 0.0011 | 0.0014 | 0.0002 | 0.0002 |
Bud Neck | 0.0025 | 0.0008 | 0.0008 | 0.0012 | 0.0004 | 0.0009 | 0.0008 | 0.0003 | 0.001 | 0.0471 | 0.0004 | 0.0016 | 0.0004 | 0.0003 | 0.0008 | 0.001 | 0.0003 | 0.0017 |
Bud Periphery | 0.0005 | 0.0007 | 0.0021 | 0.0003 | 0.0003 | 0.0003 | 0.0084 | 0.0095 | 0.0132 | 0.013 | 0.0118 | 0.0089 | 0.0005 | 0.0019 | 0.0004 | 0.0024 | 0.0001 | 0.0002 |
Bud Site | 0.0031 | 0.0121 | 0.0051 | 0.0147 | 0.0003 | 0.0004 | 0.0038 | 0.0535 | 0.0183 | 0.0775 | 0.0162 | 0.0016 | 0.001 | 0.0084 | 0.0015 | 0.0015 | 0.0004 | 0.0001 |
Cell Periphery | 0.0005 | 0.0013 | 0.0004 | 0.0002 | 0.0001 | 0.0001 | 0.0006 | 0.0014 | 0.0007 | 0.0017 | 0.0003 | 0.0003 | 0.0003 | 0.0003 | 0.0002 | 0.0002 | 0.0001 | 0.0001 |
Cytoplasm | 0.4442 | 0.5376 | 0.6147 | 0.6144 | 0.5585 | 0.6698 | 0.419 | 0.5534 | 0.5588 | 0.3983 | 0.4453 | 0.618 | 0.6952 | 0.8363 | 0.785 | 0.7416 | 0.8909 | 0.8391 |
Cytoplasmic Foci | 0.0588 | 0.0161 | 0.017 | 0.0422 | 0.0303 | 0.0152 | 0.0424 | 0.0053 | 0.0157 | 0.0578 | 0.0218 | 0.014 | 0.023 | 0.0191 | 0.0262 | 0.0213 | 0.0177 | 0.0171 |
Eisosomes | 0.0005 | 0.0003 | 0.0002 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0001 | 0.0002 | 0.0001 | 0.0003 | 0.0001 | 0.0005 | 0 | 0.0001 | 0.0001 | 0 | 0.0001 |
Endoplasmic Reticulum | 0.0062 | 0.0068 | 0.0057 | 0.0036 | 0.0016 | 0.0022 | 0.0043 | 0.0021 | 0.0025 | 0.0015 | 0.0022 | 0.0017 | 0.0074 | 0.0047 | 0.0052 | 0.0069 | 0.0065 | 0.0073 |
Endosome | 0.0369 | 0.0109 | 0.0184 | 0.0462 | 0.0392 | 0.0081 | 0.0181 | 0.0015 | 0.0062 | 0.0342 | 0.0135 | 0.0052 | 0.0156 | 0.0191 | 0.0448 | 0.0442 | 0.0317 | 0.0228 |
Golgi | 0.0128 | 0.0089 | 0.0065 | 0.0124 | 0.0321 | 0.0061 | 0.0051 | 0.0003 | 0.0045 | 0.0143 | 0.0172 | 0.0036 | 0.0035 | 0.0018 | 0.0042 | 0.002 | 0.0016 | 0.0011 |
Lipid Particles | 0.0174 | 0.0051 | 0.0069 | 0.0032 | 0.0263 | 0.0137 | 0.0109 | 0.0002 | 0.0016 | 0.0039 | 0.0073 | 0.0043 | 0.009 | 0.0005 | 0.0034 | 0.0018 | 0.0004 | 0.0002 |
Mitochondria | 0.0103 | 0.0026 | 0.0075 | 0.0486 | 0.0039 | 0.0117 | 0.0038 | 0.0005 | 0.0028 | 0.0213 | 0.0191 | 0.0103 | 0.016 | 0.0004 | 0.0079 | 0.0049 | 0.0004 | 0.006 |
None | 0.3252 | 0.3614 | 0.2883 | 0.1956 | 0.285 | 0.2329 | 0.4228 | 0.3069 | 0.3055 | 0.2187 | 0.3524 | 0.2993 | 0.1775 | 0.0947 | 0.0909 | 0.1248 | 0.0375 | 0.0916 |
Nuclear Periphery | 0.0035 | 0.0016 | 0.0017 | 0.0011 | 0.0004 | 0.0008 | 0.0098 | 0.0006 | 0.0016 | 0.0026 | 0.0007 | 0.0007 | 0.004 | 0.0008 | 0.0018 | 0.0039 | 0.0014 | 0.0013 |
Nucleolus | 0.0012 | 0.0002 | 0.0011 | 0.0003 | 0.0001 | 0.0001 | 0.0006 | 0.0003 | 0.001 | 0.0093 | 0.0003 | 0.0027 | 0.001 | 0.0002 | 0.0009 | 0.0007 | 0.0001 | 0.0001 |
Nucleus | 0.0023 | 0.001 | 0.0011 | 0.0011 | 0.0004 | 0.0007 | 0.002 | 0.0022 | 0.0043 | 0.0204 | 0.001 | 0.0017 | 0.0036 | 0.0015 | 0.0029 | 0.0061 | 0.0021 | 0.0023 |
Peroxisomes | 0.022 | 0.0058 | 0.0033 | 0.0039 | 0.0139 | 0.0073 | 0.0143 | 0.0003 | 0.0064 | 0.0088 | 0.0303 | 0.0129 | 0.0129 | 0.0002 | 0.0028 | 0.0015 | 0.0004 | 0.0002 |
Punctate Nuclear | 0.0045 | 0.0008 | 0.0022 | 0.001 | 0.0004 | 0.0017 | 0.0068 | 0.0007 | 0.0069 | 0.0349 | 0.0009 | 0.004 | 0.0108 | 0.0011 | 0.0063 | 0.0069 | 0.0014 | 0.0016 |
Vacuole | 0.0065 | 0.0026 | 0.003 | 0.0068 | 0.0017 | 0.0013 | 0.0036 | 0.0019 | 0.0026 | 0.0158 | 0.0024 | 0.0017 | 0.0027 | 0.0037 | 0.0072 | 0.0206 | 0.0049 | 0.002 |
Vacuole Periphery | 0.0012 | 0.0004 | 0.0006 | 0.0012 | 0.0005 | 0.0004 | 0.0016 | 0.0002 | 0.0004 | 0.0027 | 0.0006 | 0.0005 | 0.0006 | 0.0004 | 0.0032 | 0.0046 | 0.0006 | 0.0006 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 19.1849 | 15.1901 | 11.2717 | 17.1374 | 19.5439 | 9.861 | 18.5791 | 16.0507 | 16.6694 | 18.6216 |
Translational Efficiency | 0.6703 | 0.7578 | 0.8532 | 0.6428 | 0.5088 | 1.669 | 0.7383 | 0.7517 | 0.8202 | 0.6512 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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