Standard name | |
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Human Ortholog | |
Description | Subunit of Elongator complex; Elongator is required for modification of wobble nucleosides in tRNA; exhibits histone acetyltransferase activity that is directed to histones H3 and H4; disruption confers resistance to K. lactis zymotoxin; human homolog ELP3 can partially complement yeast elp3 null mutant |
ensLOC | DeepLoc | |||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Localization | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | WT1 | WT2 | WT3 | AF100 | AF140 | AF180 |
Cortical Patches | 1 | 0 | 0 | 1 | 0 | 2 | 13 | – | 7 | 8 | 12 | 5 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | 0 | 2 | 4 | – | 5 | 3 | 9 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | – | – | – | – | – |
Cell Periphery | 1 | 4 | 14 | 18 | 17 | 15 | 31 | – | 20 | 27 | 16 | 16 | 0 | 0 | 3 | 27 | 10 | 14 | 0 | 0 | 0 | 0 | 0 | 0 |
Cytoplasm | 286 | 88 | 201 | 360 | 452 | 452 | 638 | – | 447 | 366 | 391 | 421 | 17 | 60 | 140 | 146 | 169 | 144 | 267 | 89 | 203 | 18 | 35 | 43 |
Endoplasmic Reticulum | 1 | 3 | 6 | 7 | 14 | 16 | 29 | – | 7 | 32 | 13 | 21 | 0 | 0 | 1 | 8 | 8 | 7 | 4 | 0 | 3 | 0 | 0 | 1 |
Endosome | 1 | 0 | 0 | 1 | 1 | 0 | 4 | – | 2 | 0 | 4 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 2 | 0 | 0 | 0 | 0 | 0 |
Golgi | 1 | 0 | 2 | 0 | 0 | 0 | 1 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 4 | 0 | 2 | 0 | 0 | 0 |
Mitochondria | 4 | 0 | 0 | 1 | 3 | 12 | 35 | – | 77 | 31 | 131 | 67 | 0 | 0 | 0 | 0 | 2 | 0 | 2 | 0 | 1 | 0 | 0 | 0 |
Nucleus | 0 | 1 | 1 | 2 | 3 | 0 | 5 | – | 0 | 2 | 0 | 3 | 0 | 1 | 1 | 4 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 2 |
Nuclear Periphery | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 0 | 1 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | 0 | 0 | 1 | – | 1 | 0 | 0 | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vac/Vac Membrane | 1 | 0 | 0 | 4 | 9 | 2 | 12 | – | 20 | 4 | 12 | 5 | 0 | 0 | 0 | 4 | 3 | 11 | 1 | 1 | 2 | 0 | 3 | 4 |
Unique Cell Count | 293 | 89 | 208 | 375 | 474 | 478 | 717 | 537 | 438 | 503 | 498 | 17 | 61 | 142 | 160 | 175 | 158 | 286 | 93 | 217 | 20 | 43 | 52 | |
Labelled Cell Count | 296 | 96 | 224 | 394 | 499 | 501 | 774 | 586 | 474 | 589 | 545 | 17 | 61 | 145 | 189 | 193 | 178 | 286 | 93 | 217 | 20 | 43 | 52 |
Screen | WT1 | WT2 | WT3 | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 | AF100 | AF140 | AF180 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Mean Cell GFP Intensity (1e-4) | 9.8 | 13.4 | 11.3 | 11.0 | 10.5 | 8.4 | 7.8 | – | 6.9 | 7.1 | 6.5 | 7.0 | 9.1 | 10.6 | 10.4 | 17.7 | 16.4 | 16.6 | – | – | – |
Std Deviation (1e-4) | 1.4 | 2.0 | 1.3 | 1.3 | 1.3 | 1.0 | 1.3 | – | 1.2 | 1.0 | 1.2 | 1.1 | 0.8 | 2.0 | 1.5 | 3.2 | 2.7 | 3.0 | – | – | – |
Intensity Change (Log2) | – | – | – | -0.04 | -0.11 | -0.43 | -0.54 | – | -0.7 | -0.66 | -0.78 | -0.69 | -0.3 | -0.1 | -0.12 | 0.65 | 0.54 | 0.56 | – | – | – |
Localization | RAP60 | RAP140 | RAP220 | RAP300 | RAP380 | RAP460 | RAP540 | RAP620 | RAP700 | HU80 | HU120 | HU160 | rpd3Δ_1 | rpd3Δ_2 | rpd3Δ_3 |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Cortical Patches | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Neck | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Bud Site | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Cell Periphery | -1.0 | -1.8 | -2.1 | -1.4 | – | -1.8 | -0.3 | -2.1 | -2.1 | 0 | 0 | -2.0 | 3.1 | -0.4 | 0.8 |
Cytoplasm | -0.4 | -0.8 | -1.2 | -3.3 | – | -4.9 | -4.7 | -6.1 | -4.5 | 0.8 | 0.7 | 1.1 | -2.2 | 0 | -2.2 |
Endoplasmic Reticulum | 0 | 0 | 0.3 | 0.8 | – | 0 | 2.2 | -0.2 | 0.8 | 0 | 0 | 0 | 1.1 | 0.9 | 0.8 |
Endosome | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Golgi | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Mitochondria | 0 | 0 | 0 | 3.2 | – | 5.8 | 3.9 | 8.1 | 5.6 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nuclear Periphery | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Nucleolus | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Peroxisomes | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
SpindlePole | 0 | 0 | 0 | 0 | – | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Vacuole | 0 | 0 | 0 | 0 | – | 2.8 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
R1 | R2 | R3 | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Pre-START | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Concentration | 5.8093 | 8.0452 | 7.027 | 6.5336 | 6.3302 | 6.9928 | 5.2801 | 8.133 | 6.9077 | 6.9219 | 5.6282 | 6.9247 | 4.1062 | 7.026 | 5.8368 | 5.3208 | 4.5613 | 6.0143 |
Actin | 0.0037 | 0.0004 | 0.0016 | 0.0041 | 0.0016 | 0.0008 | 0.0276 | 0.0002 | 0.0098 | 0.0042 | 0.0119 | 0.0011 | 0.0296 | 0.0005 | 0.002 | 0.0032 | 0.0466 | 0.0004 |
Bud | 0.0024 | 0.0014 | 0.0028 | 0.0202 | 0.0011 | 0.001 | 0.0006 | 0.0012 | 0.0005 | 0.003 | 0.0017 | 0.0004 | 0.0011 | 0.0054 | 0.0002 | 0.0004 | 0.0012 | 0.0018 |
Bud Neck | 0.0012 | 0.0008 | 0.0006 | 0.0009 | 0.0017 | 0.0013 | 0.0027 | 0.0001 | 0.0005 | 0.0005 | 0.0009 | 0.0007 | 0.0027 | 0.0001 | 0.0004 | 0.0005 | 0.0007 | 0.0005 |
Bud Periphery | 0.0019 | 0.0005 | 0.0022 | 0.0121 | 0.0006 | 0.0008 | 0.0006 | 0.0004 | 0.0002 | 0.0097 | 0.0016 | 0.0006 | 0.0015 | 0.0021 | 0.0001 | 0.0001 | 0.0018 | 0.0007 |
Bud Site | 0.0064 | 0.0109 | 0.0088 | 0.0063 | 0.0044 | 0.0003 | 0.0052 | 0.0018 | 0.0011 | 0.0007 | 0.0028 | 0.0004 | 0.004 | 0.0021 | 0.0004 | 0.0005 | 0.0014 | 0.0001 |
Cell Periphery | 0.0008 | 0.0002 | 0.0003 | 0.0006 | 0.0001 | 0.0001 | 0.0009 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0001 | 0.001 | 0.0001 | 0.0003 | 0.0002 | 0.0001 | 0.0001 |
Cytoplasm | 0.8222 | 0.9391 | 0.9041 | 0.8227 | 0.8802 | 0.9204 | 0.7372 | 0.9621 | 0.8708 | 0.7704 | 0.6817 | 0.8804 | 0.7601 | 0.9604 | 0.9141 | 0.8803 | 0.7453 | 0.9384 |
Cytoplasmic Foci | 0.0286 | 0.0135 | 0.0179 | 0.0235 | 0.0206 | 0.0161 | 0.0345 | 0.0072 | 0.0193 | 0.0276 | 0.0414 | 0.0132 | 0.0237 | 0.0064 | 0.0124 | 0.0109 | 0.035 | 0.0113 |
Eisosomes | 0 | 0 | 0 | 0 | 0.0001 | 0 | 0.0002 | 0 | 0.0001 | 0 | 0.0001 | 0 | 0.0003 | 0 | 0.0003 | 0.0003 | 0.0002 | 0 |
Endoplasmic Reticulum | 0.0202 | 0.005 | 0.0031 | 0.0047 | 0.0026 | 0.0094 | 0.023 | 0.0059 | 0.0085 | 0.0108 | 0.0043 | 0.0272 | 0.0406 | 0.0049 | 0.0117 | 0.0231 | 0.0106 | 0.0124 |
Endosome | 0.0643 | 0.0137 | 0.0272 | 0.0477 | 0.0451 | 0.0296 | 0.082 | 0.0114 | 0.0493 | 0.1048 | 0.0951 | 0.0457 | 0.0537 | 0.0111 | 0.0257 | 0.0277 | 0.0374 | 0.022 |
Golgi | 0.0123 | 0.0009 | 0.0043 | 0.0084 | 0.0047 | 0.0048 | 0.0155 | 0.001 | 0.0072 | 0.0084 | 0.0263 | 0.0064 | 0.0149 | 0.0007 | 0.0018 | 0.0016 | 0.0065 | 0.0016 |
Lipid Particles | 0.0008 | 0.0001 | 0.0003 | 0.0079 | 0.0045 | 0.0012 | 0.0104 | 0 | 0.0016 | 0.0003 | 0.009 | 0.0008 | 0.0172 | 0 | 0.0013 | 0.0009 | 0.0248 | 0 |
Mitochondria | 0.0092 | 0.0005 | 0.0058 | 0.0025 | 0.0134 | 0.0028 | 0.0068 | 0.0007 | 0.0026 | 0.0113 | 0.042 | 0.0086 | 0.004 | 0.0005 | 0.0006 | 0.0003 | 0.0021 | 0.0025 |
None | 0.0062 | 0.0021 | 0.0047 | 0.0115 | 0.0025 | 0.0032 | 0.0127 | 0.0021 | 0.0064 | 0.0027 | 0.0018 | 0.0015 | 0.0103 | 0.0017 | 0.0074 | 0.0352 | 0.0028 | 0.0028 |
Nuclear Periphery | 0.0018 | 0.0005 | 0.0007 | 0.0011 | 0.0007 | 0.0006 | 0.0112 | 0.0005 | 0.002 | 0.0026 | 0.0367 | 0.002 | 0.0058 | 0.0004 | 0.0012 | 0.0026 | 0.0039 | 0.0009 |
Nucleolus | 0.0002 | 0.0002 | 0.0002 | 0.0001 | 0.0002 | 0.0001 | 0.0004 | 0 | 0.0001 | 0.0001 | 0.0004 | 0.0006 | 0.0013 | 0 | 0.0008 | 0.0001 | 0.0002 | 0 |
Nucleus | 0.0021 | 0.0015 | 0.0014 | 0.0021 | 0.002 | 0.0012 | 0.0024 | 0.0007 | 0.0015 | 0.0018 | 0.003 | 0.0018 | 0.0019 | 0.0005 | 0.0009 | 0.0014 | 0.0014 | 0.0009 |
Peroxisomes | 0.0009 | 0.0001 | 0.0026 | 0.0013 | 0.0032 | 0.0003 | 0.0047 | 0 | 0.001 | 0.0004 | 0.0109 | 0.0003 | 0.0051 | 0 | 0.0099 | 0.0001 | 0.0358 | 0 |
Punctate Nuclear | 0.0004 | 0.001 | 0.0005 | 0.0004 | 0.0005 | 0.0003 | 0.0064 | 0.0001 | 0.0019 | 0.0003 | 0.0013 | 0.0003 | 0.0034 | 0.0001 | 0.0022 | 0.0006 | 0.035 | 0.0002 |
Vacuole | 0.0119 | 0.0066 | 0.0091 | 0.0187 | 0.0082 | 0.0044 | 0.0123 | 0.0037 | 0.013 | 0.0325 | 0.0187 | 0.0053 | 0.0158 | 0.0025 | 0.0053 | 0.0086 | 0.0051 | 0.0025 |
Vacuole Periphery | 0.0026 | 0.001 | 0.0016 | 0.003 | 0.0021 | 0.0013 | 0.0026 | 0.0006 | 0.0024 | 0.0077 | 0.0081 | 0.0026 | 0.0019 | 0.0004 | 0.001 | 0.0016 | 0.002 | 0.0011 |
R1 | R2 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | G1 Post-START | S/G2 | Metaphase | Anaphase | Telophase | |
Gene Expression | 52.4018 | 50.0848 | 40.2257 | 36.6264 | 38.8846 | 22.3984 | 37.9805 | 26.7401 | 24.4529 | 40.7554 |
Translational Efficiency | 1.0667 | 1.18 | 1.0912 | 0.9344 | 1.0881 | 1.7573 | 1.1962 | 1.0885 | 1.0809 | 0.9994 |
Dataset | Hit |
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Protein Concentration | ✘ |
Protein Localization | ✘ |
Gene Expression | ✘ |
Translational Efficiency | ✘ |
Temp | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Vph1-GFP) |
---|---|---|---|---|
37℃ | ||||
RT |
Gene / Allele | Actin Patch (Sac6-tdTomato) | Cortical Patch (Sla1-GFP) | Late Endosome (Snf7-GFP) | Vacuole (Sac6-tdTomato) |
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Gene | Images |
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Gene | Images |
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